RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 M0R378 163 aa12.23□□□□□ -0.45
APP-215ENST00000474136 CBY1Q9Y3M2 126 aa12.23□□□□□ -0.45
APP-215ENST00000474136 A0A0B4J2C4 111 aa12.22□□□□□ -0.45
APP-215ENST00000474136 KRTAP9-6A0A140TA67 174 aa12.22□□□□□ -0.45
APP-215ENST00000474136 LBHQ53QV2 105 aaPredicted RBP12.22□□□□□ -0.45
APP-215ENST00000474136 C1orf137Q5JT78 98 aa12.22□□□□□ -0.45
APP-215ENST00000474136 RAB37Q96AX2 223 aa12.22□□□□□ -0.45
APP-215ENST00000474136 CFC1BP0CG36 223 aa12.2□□□□□ -0.46
APP-215ENST00000474136 CFC1P0CG37 223 aa12.2□□□□□ -0.46
APP-215ENST00000474136 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
APP-215ENST00000474136 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
APP-215ENST00000474136 TMEM126AQ9H061 195 aa12.2□□□□□ -0.46
APP-215ENST00000474136 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
APP-215ENST00000474136 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
APP-215ENST00000474136 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
APP-215ENST00000474136 PRR4Q16378 134 aa12.19□□□□□ -0.46
APP-215ENST00000474136 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
APP-215ENST00000474136 C22orf24Q9Y442 160 aa12.19□□□□□ -0.46
APP-215ENST00000474136 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
APP-215ENST00000474136 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
APP-215ENST00000474136 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
APP-215ENST00000474136 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
APP-215ENST00000474136 PRO1854Q9UHT4 67 aa12.18□□□□□ -0.46
APP-215ENST00000474136 M0QXV9 152 aa12.17□□□□□ -0.46
APP-215ENST00000474136 NCR3O14931 201 aa12.17□□□□□ -0.46
APP-215ENST00000474136 BATFQ16520 125 aa12.17□□□□□ -0.46
APP-215ENST00000474136 Q8NDZ9 215 aa12.17□□□□□ -0.46
APP-215ENST00000474136 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
APP-215ENST00000474136 LCE2AQ5TA79 106 aaPredicted RBP12.15□□□□□ -0.46
APP-215ENST00000474136 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.46
APP-215ENST00000474136 DIRC1Q969H9 104 aa12.15□□□□□ -0.46
APP-215ENST00000474136 IGLV7-43P04211 117 aa12.14□□□□□ -0.47
APP-215ENST00000474136 KRTAP7-1Q8IUC3 87 aa12.14□□□□□ -0.47
APP-215ENST00000474136 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
APP-215ENST00000474136 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
APP-215ENST00000474136 KRTAP11-1Q8IUC1 163 aa12.12□□□□□ -0.47
APP-215ENST00000474136 LINC00167Q96N53 147 aa12.12□□□□□ -0.47
APP-215ENST00000474136 H0Y9J4 135 aa12.11□□□□□ -0.47
APP-215ENST00000474136 IGLV1-50A0A075B6I6 118 aa12.11□□□□□ -0.47
APP-215ENST00000474136 KRTAP1-4P0C5Y4 121 aa12.11□□□□□ -0.47
APP-215ENST00000474136 RPL13AP40429 203 aaKnown RBP12.11□□□□□ -0.47
APP-215ENST00000474136 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
APP-215ENST00000474136 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
APP-215ENST00000474136 GAGE10A6NGK3 116 aa12.09□□□□□ -0.47
APP-215ENST00000474136 UBE2BP63146 152 aa12.09□□□□□ -0.47
APP-215ENST00000474136 K7ERJ3 54 aa12.08□□□□□ -0.48
APP-215ENST00000474136 Q1RN00 199 aa12.08□□□□□ -0.48
APP-215ENST00000474136 KCNQ1DNQ9H478 68 aa12.08□□□□□ -0.48
APP-215ENST00000474136 PRYO14603 147 aa12.07□□□□□ -0.48
APP-215ENST00000474136 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
APP-215ENST00000474136 RPL37AP8A6NKH3 93 aa12.06□□□□□ -0.48
APP-215ENST00000474136 H7C2G1 150 aa12.05□□□□□ -0.48
APP-215ENST00000474136 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
APP-215ENST00000474136 VAMP3Q15836 100 aa12.04□□□□□ -0.48
APP-215ENST00000474136 SMIM11BQ8TCY0 68 aa12.04□□□□□ -0.48
APP-215ENST00000474136 COX6CP09669 75 aa12.03□□□□□ -0.48
APP-215ENST00000474136 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
APP-215ENST00000474136 TSPAN13O95857 204 aa12.02□□□□□ -0.49
APP-215ENST00000474136 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
APP-215ENST00000474136 PSMB2P49721 201 aa12.01□□□□□ -0.49
APP-215ENST00000474136 C9orf118A6NHY6 69 aa11.99□□□□□ -0.49
APP-215ENST00000474136 SPRR1AP35321 89 aa11.99□□□□□ -0.49
APP-215ENST00000474136 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
APP-215ENST00000474136 H0YGX0 51 aa11.98□□□□□ -0.49
APP-215ENST00000474136 TAX1BP3O14907 124 aa11.98□□□□□ -0.49
APP-215ENST00000474136 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
APP-215ENST00000474136 ETDCA0A1B0GVM5 59 aa11.97□□□□□ -0.49
APP-215ENST00000474136 SNCGO76070 127 aa11.95□□□□□ -0.5
APP-215ENST00000474136 H3BUT2 72 aa11.94□□□□□ -0.5
APP-215ENST00000474136 TRIAP1O43715 76 aa11.94□□□□□ -0.5
APP-215ENST00000474136 BCE1O60756 84 aa11.94□□□□□ -0.5
APP-215ENST00000474136 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
APP-215ENST00000474136 COX7BP24311 80 aa11.93□□□□□ -0.5
APP-215ENST00000474136 KRTAP4-16G5E9R7 235 aaPredicted RBP11.92□□□□□ -0.5
APP-215ENST00000474136 ELOF1P60002 83 aaKnown RBP11.92□□□□□ -0.5
APP-215ENST00000474136 MUC17Q685J3 4493 aa11.92□□□□□ -0.5
APP-215ENST00000474136 B5MCH6 92 aa11.9□□□□□ -0.5
APP-215ENST00000474136 SLC25A20O43772 301 aa11.9□□□□□ -0.5
APP-215ENST00000474136 Q6ZRX8 168 aa11.9□□□□□ -0.5
APP-215ENST00000474136 FAM19A1Q7Z5A9 133 aa11.9□□□□□ -0.5
APP-215ENST00000474136 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
APP-215ENST00000474136 FABP2P12104 132 aa11.89□□□□□ -0.51
APP-215ENST00000474136 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
APP-215ENST00000474136 UBE2AP49459 152 aa11.88□□□□□ -0.51
APP-215ENST00000474136 DHRS4-AS1Q9P1J3 65 aa11.88□□□□□ -0.51
APP-215ENST00000474136 A0A1B0GX51 115 aa11.87□□□□□ -0.51
APP-215ENST00000474136 NAA38Q9BRA0 125 aaKnown RBP11.87□□□□□ -0.51
APP-215ENST00000474136 LINC00575Q6W349 94 aa11.86□□□□□ -0.51
APP-215ENST00000474136 ZNF861PO60384 105 aa11.85□□□□□ -0.51
APP-215ENST00000474136 A0A087X002 238 aa11.84□□□□□ -0.51
APP-215ENST00000474136 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
APP-215ENST00000474136 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
APP-215ENST00000474136 PRLHP81277 87 aa11.82□□□□□ -0.52
APP-215ENST00000474136 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
APP-215ENST00000474136 GHRHP01286 108 aa11.81□□□□□ -0.52
APP-215ENST00000474136 CLEC2BQ92478 149 aa11.81□□□□□ -0.52
APP-215ENST00000474136 LST1O00453 97 aa11.8□□□□□ -0.52
APP-215ENST00000474136 TRACP01848 142 aa11.8□□□□□ -0.52
APP-215ENST00000474136 RETNLBQ9BQ08 111 aa11.8□□□□□ -0.52
APP-215ENST00000474136 DNAL4O96015 105 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms