RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	SETD2	Q9BYW2	2564 aa	Predicted RBP	-0.89	□□□□□ -2.55
BBX-223	ENST00000473542		A0A1B0GUT8	65 aa		-0.9	□□□□□ -2.55
BBX-223	ENST00000473542	RGPD8	O14715	1765 aa	Predicted RBP	-0.91	□□□□□ -2.55
BBX-223	ENST00000473542	RGPD5	Q99666	1765 aa		-0.91	□□□□□ -2.55
BBX-223	ENST00000473542	LRRC9	Q6ZRR7	1453 aa		-0.91	□□□□□ -2.55
BBX-223	ENST00000473542	RPL38	P63173	70 aa	Known RBP	-0.91	□□□□□ -2.56
BBX-223	ENST00000473542	UBR3	Q6ZT12	1888 aa		-0.91	□□□□□ -2.56
BBX-223	ENST00000473542	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	-0.92	□□□□□ -2.56
BBX-223	ENST00000473542	CIC	Q96RK0	1608 aa	Predicted RBP	-0.92	□□□□□ -2.56
BBX-223	ENST00000473542	LRRC7	Q96NW7	1537 aa		-0.92	□□□□□ -2.56
BBX-223	ENST00000473542	SPRR2E	P22531	72 aa		-0.92	□□□□□ -2.56
BBX-223	ENST00000473542	CCNB3	Q8WWL7	1395 aa		-0.93	□□□□□ -2.56
BBX-223	ENST00000473542	UBR1	Q8IWV7	1749 aa		-0.93	□□□□□ -2.56
BBX-223	ENST00000473542	NF1	P21359	2839 aa		-0.93	□□□□□ -2.56
BBX-223	ENST00000473542	CREBBP	Q92793	2442 aa		-0.94	□□□□□ -2.56
BBX-223	ENST00000473542	NEXMIF	Q5QGS0	1516 aa		-0.94	□□□□□ -2.56
BBX-223	ENST00000473542	CYB5A	P00167	134 aa		-0.95	□□□□□ -2.56
BBX-223	ENST00000473542	KRTAP19-8	Q3LI54	63 aa		-0.95	□□□□□ -2.56
BBX-223	ENST00000473542	RGPD1	P0DJD0	1748 aa		-0.95	□□□□□ -2.56
BBX-223	ENST00000473542	PYY3	Q5JQD4	70 aa		-0.96	□□□□□ -2.56
BBX-223	ENST00000473542	GAFA1	Q96PS6	74 aa		-0.96	□□□□□ -2.56
BBX-223	ENST00000473542	TG	P01266	2768 aa		-0.96	□□□□□ -2.56
BBX-223	ENST00000473542	PKD1	P98161	4303 aa		-0.97	□□□□□ -2.56
BBX-223	ENST00000473542	TRANK1	O15050	2925 aa		-0.97	□□□□□ -2.57
BBX-223	ENST00000473542	IQCF6	A8MYZ5	107 aa		-0.98	□□□□□ -2.57
BBX-223	ENST00000473542		H0YGG7	62 aa		-0.98	□□□□□ -2.57
BBX-223	ENST00000473542	RGPD4	Q7Z3J3	1758 aa		-0.98	□□□□□ -2.57
BBX-223	ENST00000473542	TIAM2	Q8IVF5	1701 aa		-0.99	□□□□□ -2.57
BBX-223	ENST00000473542	AKAP13	Q12802	2813 aa		-0.99	□□□□□ -2.57
BBX-223	ENST00000473542	LAMA5	O15230	3695 aa		-1	□□□□□ -2.57
BBX-223	ENST00000473542	SUPT6H	Q7KZ85	1726 aa	Known RBP	-1	□□□□□ -2.57
BBX-223	ENST00000473542	PLIN4	Q96Q06	1357 aa		-1	□□□□□ -2.57
BBX-223	ENST00000473542	ABCC3	O15438	1527 aa		-1	□□□□□ -2.57
BBX-223	ENST00000473542	MYMX	A0A1B0GTQ4	84 aa		-1.01	□□□□□ -2.57
BBX-223	ENST00000473542	MT4	P47944	62 aa		-1.01	□□□□□ -2.57
BBX-223	ENST00000473542	KNL1	Q8NG31	2342 aa		-1.01	□□□□□ -2.57
BBX-223	ENST00000473542	RYR3	Q15413	4870 aa		-1.01	□□□□□ -2.57
BBX-223	ENST00000473542	DOPEY1	Q5JWR5	2465 aa		-1.01	□□□□□ -2.57
BBX-223	ENST00000473542	RGPD3	A6NKT7	1758 aa	Predicted RBP	-1.02	□□□□□ -2.57
BBX-223	ENST00000473542	TTC37	Q6PGP7	1564 aa		-1.02	□□□□□ -2.57
BBX-223	ENST00000473542		Q9H521	79 aa		-1.02	□□□□□ -2.57
BBX-223	ENST00000473542		V9GYS6	101 aa		-1.02	□□□□□ -2.57
BBX-223	ENST00000473542	NDUFA3	O95167	84 aa		-1.03	□□□□□ -2.57
BBX-223	ENST00000473542	SNRPF	P62306	86 aa	Known RBP	-1.03	□□□□□ -2.57
BBX-223	ENST00000473542	TRAV21	A0A0B4J279	112 aa		-1.04	□□□□□ -2.58
BBX-223	ENST00000473542	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-1.04	□□□□□ -2.58
BBX-223	ENST00000473542	HIVEP1	P15822	2718 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	POLR1A	O95602	1720 aa	Predicted RBP	-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	C4A	P0C0L4	1744 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	C4B	P0C0L5	1744 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	SPTBN4	Q9H254	2564 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	PVALEF	A0A1B0GWK0	134 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542		K7EP34	96 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	LINC00643	Q86TS7	51 aa		-1.05	□□□□□ -2.58
BBX-223	ENST00000473542	TMEM131L	A2VDJ0	1609 aa		-1.06	□□□□□ -2.58
BBX-223	ENST00000473542	RABAC1	Q9UI14	185 aa		-1.06	□□□□□ -2.58
BBX-223	ENST00000473542	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	-1.06	□□□□□ -2.58
BBX-223	ENST00000473542	USP32	Q8NFA0	1604 aa		-1.07	□□□□□ -2.58
BBX-223	ENST00000473542	MXRA5	Q9NR99	2828 aa		-1.07	□□□□□ -2.58
BBX-223	ENST00000473542	NDUFB1	O75438	58 aa		-1.07	□□□□□ -2.58
BBX-223	ENST00000473542	S100A16	Q96FQ6	103 aa	Known RBP	-1.07	□□□□□ -2.58
BBX-223	ENST00000473542	HYDIN	Q4G0P3	5121 aa		-1.07	□□□□□ -2.58
BBX-223	ENST00000473542	KIAA1109	Q2LD37	5005 aa		-1.08	□□□□□ -2.58
BBX-223	ENST00000473542	LTN1	O94822	1766 aa		-1.08	□□□□□ -2.58
BBX-223	ENST00000473542	WFDC9	Q8NEX5	89 aa		-1.09	□□□□□ -2.58
BBX-223	ENST00000473542	RYR1	P21817	5038 aa		-1.09	□□□□□ -2.58
BBX-223	ENST00000473542	SON	P18583	2426 aa	Known RBP	-1.09	□□□□□ -2.58
BBX-223	ENST00000473542	TNRC18	O15417	2968 aa	Predicted RBP	-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	PRRC2C	Q9Y520	2896 aa	Known RBP	-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	CEBPZOS	A8MTT3	80 aa		-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	ACYP1	P07311	99 aa		-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	NBAS	A2RRP1	2371 aa		-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	NWD1	Q149M9	1564 aa		-1.1	□□□□□ -2.59
BBX-223	ENST00000473542	USH2A	O75445	5202 aa		-1.11	□□□□□ -2.59
BBX-223	ENST00000473542	MAP3K4	Q9Y6R4	1608 aa		-1.11	□□□□□ -2.59
BBX-223	ENST00000473542	C3orf79	P0CE67	100 aa		-1.11	□□□□□ -2.59
BBX-223	ENST00000473542	DNAH6	Q9C0G6	4158 aa		-1.11	□□□□□ -2.59
BBX-223	ENST00000473542	FAT3	Q8TDW7	4589 aa		-1.11	□□□□□ -2.59
BBX-223	ENST00000473542	URB2	Q14146	1524 aa	Known RBP	-1.12	□□□□□ -2.59
BBX-223	ENST00000473542	UBR4	Q5T4S7	5183 aa		-1.12	□□□□□ -2.59
BBX-223	ENST00000473542	NES	P48681	1621 aa		-1.12	□□□□□ -2.59
BBX-223	ENST00000473542	KIF14	Q15058	1648 aa		-1.13	□□□□□ -2.59
BBX-223	ENST00000473542	LYST	Q99698	3801 aa		-1.13	□□□□□ -2.59
BBX-223	ENST00000473542	PLXNC1	O60486	1568 aa		-1.13	□□□□□ -2.59
BBX-223	ENST00000473542	HTT	P42858	3142 aa		-1.14	□□□□□ -2.59
BBX-223	ENST00000473542	STARD9	Q9P2P6	4700 aa		-1.14	□□□□□ -2.59
BBX-223	ENST00000473542	PDE4DIP	Q5VU43	2346 aa		-1.14	□□□□□ -2.59
BBX-223	ENST00000473542	HECTD1	Q9ULT8	2610 aa		-1.14	□□□□□ -2.59
BBX-223	ENST00000473542	PPL	O60437	1756 aa		-1.14	□□□□□ -2.59
BBX-223	ENST00000473542	MAGI3	Q5TCQ9	1506 aa		-1.15	□□□□□ -2.59
BBX-223	ENST00000473542	PRO3102	Q9H379	93 aa		-1.15	□□□□□ -2.59
BBX-223	ENST00000473542	DOT1L	Q8TEK3	1739 aa		-1.15	□□□□□ -2.59
BBX-223	ENST00000473542	WIZ	O95785	1651 aa		-1.16	□□□□□ -2.59
BBX-223	ENST00000473542	NCOA2	Q15596	1464 aa		-1.16	□□□□□ -2.59
BBX-223	ENST00000473542	MT1A	P04731	61 aa		-1.16	□□□□□ -2.6
BBX-223	ENST00000473542	SPRR2F	Q96RM1	72 aa		-1.17	□□□□□ -2.6
BBX-223	ENST00000473542	NBPF19	A0A087WUL8	3843 aa		-1.18	□□□□□ -2.6
BBX-223	ENST00000473542	CCDC88B	A6NC98	1476 aa		-1.18	□□□□□ -2.6
BBX-223	ENST00000473542	LCE6A	A0A183	80 aa		-1.19	□□□□□ -2.6
BBX-223	ENST00000473542	ZNF831	Q5JPB2	1677 aa		-1.2	□□□□□ -2.6

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