RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 EEA1Q15075 1411 aa1.14□□□□□ -2.23
CTSS-203ENST00000472977 ABCA2Q9BZC7 2435 aa1.13□□□□□ -2.23
CTSS-203ENST00000472977 K7EMI3 77 aa1.13□□□□□ -2.23
CTSS-203ENST00000472977 NAV2Q8IVL1 2488 aa1.12□□□□□ -2.23
CTSS-203ENST00000472977 HELZ2Q9BYK8 2649 aaKnown RBP1.12□□□□□ -2.23
CTSS-203ENST00000472977 SPRR1AP35321 89 aa1.12□□□□□ -2.23
CTSS-203ENST00000472977 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
CTSS-203ENST00000472977 CEP350Q5VT06 3117 aa1.12□□□□□ -2.23
CTSS-203ENST00000472977 ABCA10Q8WWZ4 1543 aa1.11□□□□□ -2.23
CTSS-203ENST00000472977 USP9XQ93008 2570 aaPredicted RBP1.11□□□□□ -2.23
CTSS-203ENST00000472977 UGGT1Q9NYU2 1555 aa1.11□□□□□ -2.23
CTSS-203ENST00000472977 GOLGA4Q13439 2230 aaKnown RBP1.11□□□□□ -2.23
CTSS-203ENST00000472977 DOPEY1Q5JWR5 2465 aa1.1□□□□□ -2.23
CTSS-203ENST00000472977 LY75O60449 1722 aa1.1□□□□□ -2.23
CTSS-203ENST00000472977 UBL5Q9BZL1 73 aa1.1□□□□□ -2.23
CTSS-203ENST00000472977 APLNQ9ULZ1 77 aa1.1□□□□□ -2.23
CTSS-203ENST00000472977 RNF17Q9BXT8 1623 aaKnown RBP1.1□□□□□ -2.23
CTSS-203ENST00000472977 C4AP0C0L4 1744 aa1.09□□□□□ -2.23
CTSS-203ENST00000472977 C4BP0C0L5 1744 aa1.09□□□□□ -2.23
CTSS-203ENST00000472977 NDUFA3O95167 84 aa1.09□□□□□ -2.23
CTSS-203ENST00000472977 COX6B1P14854 86 aa1.09□□□□□ -2.23
CTSS-203ENST00000472977 CROCC2H7BZ55 1655 aa1.09□□□□□ -2.24
CTSS-203ENST00000472977 CPS1P31327 1500 aa1.09□□□□□ -2.24
CTSS-203ENST00000472977 TEP1Q99973 2627 aaKnown RBP1.08□□□□□ -2.24
CTSS-203ENST00000472977 C3P01024 1663 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 PLCE1Q9P212 2302 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 SPRR1BP22528 89 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 FCER1GP30273 86 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 KLK9Q2XQG4 91 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 USF3Q68DE3 2245 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 SETXQ7Z333 2677 aaKnown RBP1.08□□□□□ -2.24
CTSS-203ENST00000472977 PTPN13Q12923 2485 aa1.08□□□□□ -2.24
CTSS-203ENST00000472977 FASNP49327 2511 aaKnown RBP1.07□□□□□ -2.24
CTSS-203ENST00000472977 H1FX-AS1Q4G0G2 97 aa1.07□□□□□ -2.24
CTSS-203ENST00000472977 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
CTSS-203ENST00000472977 DOPEY2Q9Y3R5 2298 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 TRANK1O15050 2925 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
CTSS-203ENST00000472977 MAST1Q9Y2H9 1570 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 PIEZO1Q92508 2521 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 FXYD6Q9H0Q3 95 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 EPG5Q9HCE0 2579 aa1.06□□□□□ -2.24
CTSS-203ENST00000472977 HECTD1Q9ULT8 2610 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 C2CD3Q4AC94 2353 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 PIEZO2Q9H5I5 2752 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
CTSS-203ENST00000472977 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 CRIP1P50238 77 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 Q5VSD8 79 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.05□□□□□ -2.24
CTSS-203ENST00000472977 SYCP2Q9BX26 1530 aa1.05□□□□□ -2.24
CTSS-203ENST00000472977 ABCA12Q86UK0 2595 aa1.04□□□□□ -2.24
CTSS-203ENST00000472977 BDP1A6H8Y1 2624 aa1.04□□□□□ -2.24
CTSS-203ENST00000472977 FLNBO75369 2602 aaKnown RBP1.04□□□□□ -2.24
CTSS-203ENST00000472977 MYO18BQ8IUG5 2567 aa1.04□□□□□ -2.24
CTSS-203ENST00000472977 ITPR3Q14573 2671 aa1.04□□□□□ -2.24
CTSS-203ENST00000472977 ANKRD11Q6UB99 2663 aaPredicted RBP1.03□□□□□ -2.24
CTSS-203ENST00000472977 ETDCA0A1B0GVM5 59 aa1.03□□□□□ -2.24
CTSS-203ENST00000472977 PRO3102Q9H379 93 aa1.03□□□□□ -2.24
CTSS-203ENST00000472977 CLASP1Q7Z460 1538 aa1.03□□□□□ -2.24
CTSS-203ENST00000472977 M0R1W7 72 aa1.02□□□□□ -2.25
CTSS-203ENST00000472977 CCL22O00626 93 aa1.02□□□□□ -2.25
CTSS-203ENST00000472977 CACNA1HO95180 2353 aa1.02□□□□□ -2.25
CTSS-203ENST00000472977 SETD2Q9BYW2 2564 aaPredicted RBP1.02□□□□□ -2.25
CTSS-203ENST00000472977 TNCP24821 2201 aa1.01□□□□□ -2.25
CTSS-203ENST00000472977 LOC730098B7Z3J9 87 aa1.01□□□□□ -2.25
CTSS-203ENST00000472977 CDKN2A-AS1Q9UH64 79 aa1.01□□□□□ -2.25
CTSS-203ENST00000472977 ANKRD36CQ5JPF3 1778 aa1.01□□□□□ -2.25
CTSS-203ENST00000472977 DEFB131BA0A096LNP1 70 aa1□□□□□ -2.25
CTSS-203ENST00000472977 H0YAA0 97 aa1□□□□□ -2.25
CTSS-203ENST00000472977 WFDC13Q8IUB5 93 aa1□□□□□ -2.25
CTSS-203ENST00000472977 TTC28Q96AY4 2481 aa1□□□□□ -2.25
CTSS-203ENST00000472977 PTPRQQ9UMZ3 2332 aa1□□□□□ -2.25
CTSS-203ENST00000472977 FANCD2Q9BXW9 1451 aa0.99□□□□□ -2.25
CTSS-203ENST00000472977 PCNTO95613 3336 aa0.99□□□□□ -2.25
CTSS-203ENST00000472977 COL6A3P12111 3177 aa0.99□□□□□ -2.25
CTSS-203ENST00000472977 CCDC168Q8NDH2 2452 aa0.99□□□□□ -2.25
CTSS-203ENST00000472977 UBR4Q5T4S7 5183 aa0.99□□□□□ -2.25
CTSS-203ENST00000472977 ANKHD1Q8IWZ3 2542 aaKnown RBP0.98□□□□□ -2.25
CTSS-203ENST00000472977 SPG11Q96JI7 2443 aa0.98□□□□□ -2.25
CTSS-203ENST00000472977 PTPRZ1P23471 2315 aaPredicted RBP0.98□□□□□ -2.25
CTSS-203ENST00000472977 LINC00158P58513 81 aa0.98□□□□□ -2.25
CTSS-203ENST00000472977 CHD6Q8TD26 2715 aa0.98□□□□□ -2.25
CTSS-203ENST00000472977 NCOR1O75376 2440 aa0.97□□□□□ -2.25
CTSS-203ENST00000472977 GCN1Q92616 2671 aaKnown RBP0.97□□□□□ -2.25
CTSS-203ENST00000472977 DEFB114Q30KQ6 69 aa0.97□□□□□ -2.25
CTSS-203ENST00000472977 NCBP2-AS2Q69YL0 99 aa0.97□□□□□ -2.25
CTSS-203ENST00000472977 COX6B2Q6YFQ2 88 aa0.97□□□□□ -2.25
CTSS-203ENST00000472977 TOGARAM1Q9Y4F4 1720 aa0.97□□□□□ -2.25
CTSS-203ENST00000472977 MYO9AB2RTY4 2548 aa0.96□□□□□ -2.26
CTSS-203ENST00000472977 SPTBN4Q9H254 2564 aa0.96□□□□□ -2.26
CTSS-203ENST00000472977 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
CTSS-203ENST00000472977 KIF21BO75037 1637 aa0.96□□□□□ -2.26
CTSS-203ENST00000472977 CEP250Q9BV73 2442 aa0.96□□□□□ -2.26
CTSS-203ENST00000472977 TPRP12270 2363 aaKnown RBP0.96□□□□□ -2.26
CTSS-203ENST00000472977 CNOT1A5YKK6 2376 aaKnown RBP0.95□□□□□ -2.26
CTSS-203ENST00000472977 MRPL33O75394 65 aaKnown RBP0.95□□□□□ -2.26
CTSS-203ENST00000472977 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms