RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 FAM168BA1KXE4 195 aa5.59□□□□□ -1.51
SF3A1-206ENST00000471037 Q8NDZ9 215 aa5.59□□□□□ -1.51
SF3A1-206ENST00000471037 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 TRAV13-2A0A0B4J235 113 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 A0A1B0GWB2 263 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 A6NDN8 102 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 M0R378 163 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 NCR3O14931 201 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 CFC1BP0CG36 223 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 CFC1P0CG37 223 aa5.58□□□□□ -1.52
SF3A1-206ENST00000471037 FAM19A5Q7Z5A7 132 aaPredicted RBP5.58□□□□□ -1.52
SF3A1-206ENST00000471037 NHP2Q9NX24 153 aaKnown RBP5.58□□□□□ -1.52
SF3A1-206ENST00000471037 M0QXV9 152 aa5.57□□□□□ -1.52
SF3A1-206ENST00000471037 LBHQ53QV2 105 aaPredicted RBP5.57□□□□□ -1.52
SF3A1-206ENST00000471037 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
SF3A1-206ENST00000471037 MRPL55Q7Z7F7 128 aaKnown RBP5.57□□□□□ -1.52
SF3A1-206ENST00000471037 KRTAP7-1Q8IUC3 87 aa5.57□□□□□ -1.52
SF3A1-206ENST00000471037 RAB37Q96AX2 223 aa5.57□□□□□ -1.52
SF3A1-206ENST00000471037 C22orf24Q9Y442 160 aa5.57□□□□□ -1.52
SF3A1-206ENST00000471037 BATFQ16520 125 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 S100A7L2Q5SY68 101 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 SNHG12Q9BXW3 62 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 TMEM126AQ9H061 195 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 PRO1854Q9UHT4 67 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 CBY1Q9Y3M2 126 aa5.56□□□□□ -1.52
SF3A1-206ENST00000471037 IGLV6-57P01721 117 aa5.55□□□□□ -1.52
SF3A1-206ENST00000471037 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
SF3A1-206ENST00000471037 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
SF3A1-206ENST00000471037 K7ERJ3 54 aa5.54□□□□□ -1.52
SF3A1-206ENST00000471037 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
SF3A1-206ENST00000471037 LINC00167Q96N53 147 aa5.54□□□□□ -1.52
SF3A1-206ENST00000471037 LPAP08519 4548 aa5.53□□□□□ -1.52
SF3A1-206ENST00000471037 GAGE10A6NGK3 116 aa5.53□□□□□ -1.52
SF3A1-206ENST00000471037 PHF5AQ7RTV0 110 aaKnown RBP5.53□□□□□ -1.52
SF3A1-206ENST00000471037 IGLV1-50A0A075B6I6 118 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 TRAV23DV6A0A075B6W5 121 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 PRYO14603 147 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 UBE2BP63146 152 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 COL5A1-AS1Q5SY13 56 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
SF3A1-206ENST00000471037 RPL37AP8A6NKH3 93 aa5.51□□□□□ -1.53
SF3A1-206ENST00000471037 H7C2G1 150 aa5.51□□□□□ -1.53
SF3A1-206ENST00000471037 Q1RN00 199 aa5.51□□□□□ -1.53
SF3A1-206ENST00000471037 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
SF3A1-206ENST00000471037 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
SF3A1-206ENST00000471037 TSPAN13O95857 204 aa5.5□□□□□ -1.53
SF3A1-206ENST00000471037 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
SF3A1-206ENST00000471037 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
SF3A1-206ENST00000471037 ZNF73O43830 326 aaPredicted RBP5.49□□□□□ -1.53
SF3A1-206ENST00000471037 SPRR1AP35321 89 aa5.49□□□□□ -1.53
SF3A1-206ENST00000471037 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
SF3A1-206ENST00000471037 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 TAX1BP3O14907 124 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 PSMB2P49721 201 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 VAMP3Q15836 100 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 C1orf137Q5JT78 98 aa5.48□□□□□ -1.53
SF3A1-206ENST00000471037 TRBV7-6A0A0J9YX20 115 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 ETDCA0A1B0GVM5 59 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 TRIAP1O43715 76 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 COX6CP09669 75 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 LYRM7Q5U5X0 104 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 KRTAP11-1Q8IUC1 163 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
SF3A1-206ENST00000471037 KRTAP4-16G5E9R7 235 aaPredicted RBP5.46□□□□□ -1.54
SF3A1-206ENST00000471037 H0YGX0 51 aa5.46□□□□□ -1.54
SF3A1-206ENST00000471037 H3BUT2 72 aa5.46□□□□□ -1.54
SF3A1-206ENST00000471037 BCE1O60756 84 aa5.46□□□□□ -1.54
SF3A1-206ENST00000471037 H0Y9J4 135 aa5.45□□□□□ -1.54
SF3A1-206ENST00000471037 COX7BP24311 80 aa5.45□□□□□ -1.54
SF3A1-206ENST00000471037 ELOF1P60002 83 aaKnown RBP5.45□□□□□ -1.54
SF3A1-206ENST00000471037 B5MCH6 92 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 SCGB1C2P0DMR2 95 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 Q6ZRX8 168 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 FAM19A1Q7Z5A9 133 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 NAA38Q9BRA0 125 aaKnown RBP5.44□□□□□ -1.54
SF3A1-206ENST00000471037 MUC2Q02817 5179 aa5.44□□□□□ -1.54
SF3A1-206ENST00000471037 A0A1W2PPM0 123 aa5.43□□□□□ -1.54
SF3A1-206ENST00000471037 FABP2P12104 132 aa5.43□□□□□ -1.54
SF3A1-206ENST00000471037 UBE2AP49459 152 aa5.43□□□□□ -1.54
SF3A1-206ENST00000471037 TRBV20-1A0A075B6N2 111 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 A0A1B0GX51 115 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 SLC25A20O43772 301 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 SNCGO76070 127 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 LINC00575Q6W349 94 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 KRTAP13-1Q8IUC0 172 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 DHRS4-AS1Q9P1J3 65 aa5.42□□□□□ -1.54
SF3A1-206ENST00000471037 PRLHP81277 87 aa5.41□□□□□ -1.54
SF3A1-206ENST00000471037 A0A0U1RQV1 116 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 hADV29S1A0JD25 119 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 LST1O00453 97 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 ZNF861PO60384 105 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 ATXN8Q156A1 80 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 CLEC2BQ92478 149 aa5.4□□□□□ -1.54
SF3A1-206ENST00000471037 FAM218AQ96MZ4 157 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms