RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 F8WEM9 126 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 IGLC2P0DOY2 106 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 IGLC3P0DOY3 106 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 ETDBQ3ZM63 59 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 COL5A1-AS1Q5SY13 56 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 ZNF720Q7Z2F6 126 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 MUSTN1Q8IVN3 82 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 CLIP1P30622 1438 aa-0.73□□□□□ -2.53
ATG3-204ENST00000467275 NBASA2RRP1 2371 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 QSER1Q2KHR3 1735 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 PKD1L3Q7Z443 1732 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 UQCRHLA0A096LP55 91 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 LEPROTL1O95214 131 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 FAUP35544 74 aaKnown RBP-0.74□□□□□ -2.53
ATG3-204ENST00000467275 CDKN2A-AS1Q9UH64 79 aa-0.74□□□□□ -2.53
ATG3-204ENST00000467275 DEFB112Q30KQ8 113 aa-0.75□□□□□ -2.53
ATG3-204ENST00000467275 NCMAPQ5T1S8 102 aa-0.75□□□□□ -2.53
ATG3-204ENST00000467275 HIGD1BQ9P298 99 aa-0.75□□□□□ -2.53
ATG3-204ENST00000467275 NIPBLQ6KC79 2804 aaeCLIP-0.75□□□□□ -2.53
ATG3-204ENST00000467275 ANK3Q12955 4377 aaKnown RBP-0.76□□□□□ -2.53
ATG3-204ENST00000467275 HEPN1Q6WQI6 88 aa-0.76□□□□□ -2.53
ATG3-204ENST00000467275 WFDC13Q8IUB5 93 aa-0.76□□□□□ -2.53
ATG3-204ENST00000467275 EPRSP07814 1512 aaKnown RBP-0.76□□□□□ -2.53
ATG3-204ENST00000467275 VPS13BQ7Z7G8 4022 aa-0.76□□□□□ -2.53
ATG3-204ENST00000467275 DNAH7Q8WXX0 4024 aa-0.76□□□□□ -2.53
ATG3-204ENST00000467275 CUBNO60494 3623 aa-0.77□□□□□ -2.53
ATG3-204ENST00000467275 USP9XQ93008 2570 aaPredicted RBP-0.77□□□□□ -2.53
ATG3-204ENST00000467275 PTPN23Q9H3S7 1636 aa-0.77□□□□□ -2.53
ATG3-204ENST00000467275 ANKRD26Q9UPS8 1709 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 ADAMTS12P58397 1594 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 M0R143 59 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 SPRR2FQ96RM1 72 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 UBE2D4Q9Y2X8 147 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 TACC2O95359 2948 aa-0.78□□□□□ -2.53
ATG3-204ENST00000467275 FANCAO15360 1455 aa-0.79□□□□□ -2.54
ATG3-204ENST00000467275 CMYA5Q8N3K9 4069 aa-0.79□□□□□ -2.54
ATG3-204ENST00000467275 LAMA3Q16787 3333 aa-0.79□□□□□ -2.54
ATG3-204ENST00000467275 ABCA13Q86UQ4 5058 aa-0.79□□□□□ -2.54
ATG3-204ENST00000467275 DYNC1H1Q14204 4646 aaKnown RBP-0.79□□□□□ -2.54
ATG3-204ENST00000467275 MAGI2Q86UL8 1455 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 CICQ96RK0 1608 aaPredicted RBP-0.8□□□□□ -2.54
ATG3-204ENST00000467275 ALKQ9UM73 1620 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 SPTBN4Q9H254 2564 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 DNAH11Q96DT5 4516 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 ABCC10Q5T3U5 1492 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 AKAP12Q02952 1782 aa-0.8□□□□□ -2.54
ATG3-204ENST00000467275 PDE4DIPQ5VU43 2346 aa-0.81□□□□□ -2.54
ATG3-204ENST00000467275 TRANK1O15050 2925 aa-0.81□□□□□ -2.54
ATG3-204ENST00000467275 COX7BP24311 80 aa-0.81□□□□□ -2.54
ATG3-204ENST00000467275 NMSQ5H8A3 153 aa-0.81□□□□□ -2.54
ATG3-204ENST00000467275 DSPP15924 2871 aaKnown RBP-0.81□□□□□ -2.54
ATG3-204ENST00000467275 ATP10BO94823 1461 aa-0.81□□□□□ -2.54
ATG3-204ENST00000467275 PRRC2CQ9Y520 2896 aaKnown RBP-0.82□□□□□ -2.54
ATG3-204ENST00000467275 RGPD8O14715 1765 aaPredicted RBP-0.82□□□□□ -2.54
ATG3-204ENST00000467275 RGPD5Q99666 1765 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 RGPD1P0DJD0 1748 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 UBR1Q8IWV7 1749 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 LAMA1P25391 3075 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 PREX1Q8TCU6 1659 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 APOBP04114 4563 aaKnown RBP-0.82□□□□□ -2.54
ATG3-204ENST00000467275 TEX15Q9BXT5 2789 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 VPS8Q8N3P4 1428 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 HTTP42858 3142 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 WDR87Q6ZQQ6 2873 aa-0.82□□□□□ -2.54
ATG3-204ENST00000467275 AKAP13Q12802 2813 aa-0.83□□□□□ -2.54
ATG3-204ENST00000467275 SPG11Q96JI7 2443 aa-0.83□□□□□ -2.54
ATG3-204ENST00000467275 SACSQ9NZJ4 4579 aa-0.83□□□□□ -2.54
ATG3-204ENST00000467275 DNAH1Q9P2D7 4330 aa-0.83□□□□□ -2.54
ATG3-204ENST00000467275 HMGN2P05204 90 aaKnown RBP-0.84□□□□□ -2.54
ATG3-204ENST00000467275 SNHG12Q9BXW3 62 aa-0.84□□□□□ -2.54
ATG3-204ENST00000467275 CELSR3Q9NYQ7 3312 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 RGPD4Q7Z3J3 1758 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 ANKRD11Q6UB99 2663 aaPredicted RBP-0.85□□□□□ -2.55
ATG3-204ENST00000467275 GYPAP02724 150 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 MT1AP04731 61 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 COX6B2Q6YFQ2 88 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 C20orf78Q9BR46 151 aa-0.85□□□□□ -2.55
ATG3-204ENST00000467275 A0A1B0GUT8 65 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 H0YGG7 62 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 SMIM11AP58511 58 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 RGPD3A6NKT7 1758 aaPredicted RBP-0.86□□□□□ -2.55
ATG3-204ENST00000467275 MYO3AQ8NEV4 1616 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 C4AP0C0L4 1744 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 C4BP0C0L5 1744 aa-0.86□□□□□ -2.55
ATG3-204ENST00000467275 SUPT6HQ7KZ85 1726 aaKnown RBP-0.86□□□□□ -2.55
ATG3-204ENST00000467275 LRRC7Q96NW7 1537 aa-0.87□□□□□ -2.55
ATG3-204ENST00000467275 NDUFA3O95167 84 aa-0.87□□□□□ -2.55
ATG3-204ENST00000467275 TIAM2Q8IVF5 1701 aa-0.87□□□□□ -2.55
ATG3-204ENST00000467275 ATP7BP35670 1465 aa-0.87□□□□□ -2.55
ATG3-204ENST00000467275 NEXMIFQ5QGS0 1516 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 S100A8P05109 93 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 PKIAP61925 76 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 PEA15Q15121 130 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 PLGLAQ15195 96 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 LRRC9Q6ZRR7 1453 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.88□□□□□ -2.55
ATG3-204ENST00000467275 COL12A1Q99715 3063 aa-0.88□□□□□ -2.55
ATG3-204ENST00000467275 TROQ12816 1431 aaPredicted RBP-0.89□□□□□ -2.55
ATG3-204ENST00000467275 DEFA5Q01523 94 aa-0.89□□□□□ -2.55
ATG3-204ENST00000467275 GAFA1Q96PS6 74 aa-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms