RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 UBE2WQ96B02 151 aa2.36□□□□□ -2.03
UBA3-204ENST00000461522 IGKV3-7A0A075B6H7 116 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 TRAV21A0A0B4J279 112 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 A0A1B0GVX0 72 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 hDV103S1A0JD37 113 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 A8MWP4 228 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 F2Z2F3 143 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 M0R3E3 92 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 LECT2O14960 151 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 SH2D1AO60880 128 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 IGKV2D-28P01615 120 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 ZNF56Q15929 161 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 Q1T7F1 81 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 DEFB121Q5J5C9 76 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 GDF5OSQ5U4N7 250 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 LINC00643Q86TS7 51 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 SMCR5Q8TEV8 140 aa2.35□□□□□ -2.03
UBA3-204ENST00000461522 MRPL35Q9NZE8 188 aaKnown RBP2.35□□□□□ -2.03
UBA3-204ENST00000461522 LOC107984156A0A0G2JMH3 177 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 LRCOL1A6NCL2 159 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 INSP01308 110 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 ADM2Q7Z4H4 148 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 ARL17AQ8IVW1 177 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 FAM19A2Q8N3H0 131 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 IFI27L1Q96BM0 104 aa2.34□□□□□ -2.03
UBA3-204ENST00000461522 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
UBA3-204ENST00000461522 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.04
UBA3-204ENST00000461522 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
UBA3-204ENST00000461522 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
UBA3-204ENST00000461522 MYMXA0A1B0GTQ4 84 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 C19orf71A6NCJ1 209 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 GNRH2O43555 120 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
UBA3-204ENST00000461522 SPART-AS1P0CW21 52 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 CRIP1P50238 77 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 ATXN8Q156A1 80 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 ESRGQ1W209 222 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 Q86TA4 180 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 LINC00269Q8N2A0 174 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 Q8NAQ8 132 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 TMEM263Q8WUH6 116 aaKnown RBP2.33□□□□□ -2.04
UBA3-204ENST00000461522 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 LINC01600Q96MT4 127 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 WFDC10AQ9H1F0 79 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 NDUFA12Q9UI09 145 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 TIMM8BQ9Y5J9 83 aaPredicted RBP2.33□□□□□ -2.04
UBA3-204ENST00000461522 U3KQK5 164 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 NBEAL2Q6ZNJ1 2754 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
UBA3-204ENST00000461522 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 H3BNG1 76 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 BCE1O60756 84 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
UBA3-204ENST00000461522 XCL1P47992 114 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 FXYD2P54710 66 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 SPINK13Q1W4C9 94 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 Q8N814 137 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 CNFNQ9BYD5 112 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 LINC00474Q9P2X8 69 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 ICOSQ9Y6W8 199 aa2.32□□□□□ -2.04
UBA3-204ENST00000461522 TMSB15BA0A087X1C1 80 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 TRAV13-2A0A0B4J235 113 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 TRAV12-3A0A0B4J271 114 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 TMEM223A0PJW6 202 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 SPINK4O60575 86 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 FCER1GP30273 86 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 DEFB1P60022 68 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 UBE2D3P61077 147 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 UBE2D2P62837 147 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 DEFB135Q30KP9 77 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 NTM-AS1Q6ZSK4 140 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 Q8TAT8 98 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 CIRBP-AS1Q8TBR5 109 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
UBA3-204ENST00000461522 A0A0B4J2C4 111 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 TRBV10-3A0A0K0K1G6 114 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 TRBV10-2A0A0K0K1G8 114 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 SMIM27A0A1W2PRY6 76 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 CRPP02741 224 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 COX6CP09669 75 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 RNASE3P12724 160 aaKnown RBP2.3□□□□□ -2.04
UBA3-204ENST00000461522 PRR9Q5T870 116 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 Q8NDZ9 215 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 CYP4F30PQ9H0H9 118 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 CYSTM1Q9H1C7 97 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 TENM3Q9P273 2699 aa2.3□□□□□ -2.04
UBA3-204ENST00000461522 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.29□□□□□ -2.04
UBA3-204ENST00000461522 TRBV25-1A0A075B6N4 114 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 TRAV7A0A075B6U4 112 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 TRAV10A0A0B4J240 114 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 TRBV6-4A0A1B0GX49 114 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 NUPR2A6NF83 97 aa2.29□□□□□ -2.04
UBA3-204ENST00000461522 H7BZZ5 65 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms