RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 TMEM126AQ9H061 195 aa13.72□□□□□ -0.21
C9orf3-209ENST00000460573 PRYO14603 147 aa13.71□□□□□ -0.21
C9orf3-209ENST00000460573 ZNF861PO60384 105 aa13.71□□□□□ -0.21
C9orf3-209ENST00000460573 S100A7L2Q5SY68 101 aa13.71□□□□□ -0.21
C9orf3-209ENST00000460573 KCNQ1DNQ9H478 68 aa13.71□□□□□ -0.21
C9orf3-209ENST00000460573 TRBV10-3A0A0K0K1G6 114 aa13.7□□□□□ -0.22
C9orf3-209ENST00000460573 MUSTN1Q8IVN3 82 aa13.7□□□□□ -0.22
C9orf3-209ENST00000460573 DIRC1Q969H9 104 aa13.7□□□□□ -0.22
C9orf3-209ENST00000460573 RPL28P46779 137 aaKnown RBP13.69□□□□□ -0.22
C9orf3-209ENST00000460573 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
C9orf3-209ENST00000460573 A6NDN8 102 aa13.68□□□□□ -0.22
C9orf3-209ENST00000460573 A6NJY4 79 aa13.68□□□□□ -0.22
C9orf3-209ENST00000460573 COL5A1-AS1Q5SY13 56 aa13.68□□□□□ -0.22
C9orf3-209ENST00000460573 CBY1Q9Y3M2 126 aa13.68□□□□□ -0.22
C9orf3-209ENST00000460573 IGLV6-57P01721 117 aa13.67□□□□□ -0.22
C9orf3-209ENST00000460573 BATFQ16520 125 aa13.67□□□□□ -0.22
C9orf3-209ENST00000460573 UBE2AP49459 152 aa13.66□□□□□ -0.22
C9orf3-209ENST00000460573 FAM19A1Q7Z5A9 133 aa13.65□□□□□ -0.22
C9orf3-209ENST00000460573 H0Y9J4 135 aa13.64□□□□□ -0.23
C9orf3-209ENST00000460573 SPRR1AP35321 89 aa13.64□□□□□ -0.23
C9orf3-209ENST00000460573 KRTAP13-1Q8IUC0 172 aa13.63□□□□□ -0.23
C9orf3-209ENST00000460573 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
C9orf3-209ENST00000460573 OR13C6PQ8NH95 151 aa13.63□□□□□ -0.23
C9orf3-209ENST00000460573 FXYD2P54710 66 aa13.61□□□□□ -0.23
C9orf3-209ENST00000460573 TRAV23DV6A0A075B6W5 121 aa13.6□□□□□ -0.23
C9orf3-209ENST00000460573 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
C9orf3-209ENST00000460573 LRP1Q07954 4544 aaKnown RBP13.59□□□□□ -0.23
C9orf3-209ENST00000460573 A0A1B0GWB2 263 aa13.58□□□□□ -0.24
C9orf3-209ENST00000460573 KRTAP4-16G5E9R7 235 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-209ENST00000460573 PRLHP81277 87 aa13.58□□□□□ -0.24
C9orf3-209ENST00000460573 PKHD1L1Q86WI1 4243 aa13.58□□□□□ -0.24
C9orf3-209ENST00000460573 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
C9orf3-209ENST00000460573 ZNF73O43830 326 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-209ENST00000460573 A4D1N5 150 aa13.55□□□□□ -0.24
C9orf3-209ENST00000460573 LINC01600Q96MT4 127 aa13.55□□□□□ -0.24
C9orf3-209ENST00000460573 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
C9orf3-209ENST00000460573 FAT3Q8TDW7 4589 aa13.55□□□□□ -0.24
C9orf3-209ENST00000460573 B5MCH6 92 aa13.52□□□□□ -0.25
C9orf3-209ENST00000460573 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
C9orf3-209ENST00000460573 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
C9orf3-209ENST00000460573 CFC1P0CG37 223 aa13.5□□□□□ -0.25
C9orf3-209ENST00000460573 Q6ZRX8 168 aa13.5□□□□□ -0.25
C9orf3-209ENST00000460573 HIGD2AQ9BW72 106 aa13.5□□□□□ -0.25
C9orf3-209ENST00000460573 TAX1BP3O14907 124 aa13.49□□□□□ -0.25
C9orf3-209ENST00000460573 KRTAP1-4P0C5Y4 121 aa13.48□□□□□ -0.25
C9orf3-209ENST00000460573 RAB37Q96AX2 223 aa13.48□□□□□ -0.25
C9orf3-209ENST00000460573 PRO1854Q9UHT4 67 aa13.48□□□□□ -0.25
C9orf3-209ENST00000460573 MT1HL1P0DM35 61 aa13.46□□□□□ -0.25
C9orf3-209ENST00000460573 TRBV7-6A0A0J9YX20 115 aa13.45□□□□□ -0.26
C9orf3-209ENST00000460573 C9orf118A6NHY6 69 aa13.45□□□□□ -0.26
C9orf3-209ENST00000460573 SMCR5Q8TEV8 140 aa13.45□□□□□ -0.26
C9orf3-209ENST00000460573 C6orf99Q4VX62 202 aa13.44□□□□□ -0.26
C9orf3-209ENST00000460573 ZNF706Q9Y5V0 76 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-209ENST00000460573 K7ERJ3 54 aa13.42□□□□□ -0.26
C9orf3-209ENST00000460573 COX7BP24311 80 aa13.42□□□□□ -0.26
C9orf3-209ENST00000460573 Q9BRP9 147 aa13.42□□□□□ -0.26
C9orf3-209ENST00000460573 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
C9orf3-209ENST00000460573 KRTAP10-8P60410 259 aa13.41□□□□□ -0.26
C9orf3-209ENST00000460573 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
C9orf3-209ENST00000460573 RPL13AP40429 203 aaKnown RBP13.4□□□□□ -0.26
C9orf3-209ENST00000460573 DHRS4-AS1Q9P1J3 65 aa13.4□□□□□ -0.26
C9orf3-209ENST00000460573 FAM229BQ4G0N7 80 aa13.39□□□□□ -0.27
C9orf3-209ENST00000460573 PRR26Q8N8Z3 221 aa13.38□□□□□ -0.27
C9orf3-209ENST00000460573 SPRR4Q96PI1 79 aa13.38□□□□□ -0.27
C9orf3-209ENST00000460573 CRYGAP11844 174 aa13.37□□□□□ -0.27
C9orf3-209ENST00000460573 H3BUT2 72 aa13.36□□□□□ -0.27
C9orf3-209ENST00000460573 VAMP3Q15836 100 aa13.36□□□□□ -0.27
C9orf3-209ENST00000460573 HMCN2Q8NDA2 5059 aa13.35□□□□□ -0.27
C9orf3-209ENST00000460573 ERC2-IT1O76042 136 aa13.35□□□□□ -0.27
C9orf3-209ENST00000460573 A0A1B0GV90 55 aa13.34□□□□□ -0.27
C9orf3-209ENST00000460573 TSPAN13O95857 204 aa13.34□□□□□ -0.27
C9orf3-209ENST00000460573 LYRM7Q5U5X0 104 aa13.34□□□□□ -0.27
C9orf3-209ENST00000460573 A0A1W2PPM0 123 aa13.33□□□□□ -0.28
C9orf3-209ENST00000460573 FABP2P12104 132 aa13.33□□□□□ -0.28
C9orf3-209ENST00000460573 ANAPC11Q9NYG5 84 aa13.32□□□□□ -0.28
C9orf3-209ENST00000460573 A0A087X002 238 aa13.31□□□□□ -0.28
C9orf3-209ENST00000460573 Q1RN00 199 aa13.31□□□□□ -0.28
C9orf3-209ENST00000460573 COX6CP09669 75 aa13.29□□□□□ -0.28
C9orf3-209ENST00000460573 LINC00483Q53H64 154 aa13.29□□□□□ -0.28
C9orf3-209ENST00000460573 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
C9orf3-209ENST00000460573 H7C2G1 150 aa13.27□□□□□ -0.29
C9orf3-209ENST00000460573 PSMB2P49721 201 aa13.27□□□□□ -0.29
C9orf3-209ENST00000460573 TYMSOSQ8TAI1 123 aa13.27□□□□□ -0.29
C9orf3-209ENST00000460573 SLC25A20O43772 301 aa13.26□□□□□ -0.29
C9orf3-209ENST00000460573 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
C9orf3-209ENST00000460573 KRTAP13-2Q52LG2 175 aa13.25□□□□□ -0.29
C9orf3-209ENST00000460573 NAA38Q9BRA0 125 aaKnown RBP13.25□□□□□ -0.29
C9orf3-209ENST00000460573 TRBV20-1A0A075B6N2 111 aa13.24□□□□□ -0.29
C9orf3-209ENST00000460573 SCGB1C2P0DMR2 95 aa13.24□□□□□ -0.29
C9orf3-209ENST00000460573 ST20-AS1Q8NBB2 130 aa13.24□□□□□ -0.29
C9orf3-209ENST00000460573 LINC00575Q6W349 94 aa13.23□□□□□ -0.29
C9orf3-209ENST00000460573 SPCS1Q9Y6A9 102 aa13.22□□□□□ -0.29
C9orf3-209ENST00000460573 H0YGX0 51 aa13.21□□□□□ -0.29
C9orf3-209ENST00000460573 K7EP34 96 aa13.21□□□□□ -0.29
C9orf3-209ENST00000460573 SPRR1BP22528 89 aa13.21□□□□□ -0.29
C9orf3-209ENST00000460573 TRIAP1O43715 76 aa13.2□□□□□ -0.3
C9orf3-209ENST00000460573 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
C9orf3-209ENST00000460573 TNXBP22105 4242 aa13.19□□□□□ -0.3
C9orf3-209ENST00000460573 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
C9orf3-209ENST00000460573 C3orf22Q8N5N4 141 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms