RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 Q6ZRU5 148 aa10.55□□□□□ -0.72
CNOT3-204ENST00000447684 TRAV22A0A0B4J277 110 aa10.55□□□□□ -0.72
CNOT3-204ENST00000447684 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
CNOT3-204ENST00000447684 Q1T7F1 81 aa10.55□□□□□ -0.72
CNOT3-204ENST00000447684 LELP1Q5T871 98 aa10.54□□□□□ -0.72
CNOT3-204ENST00000447684 Q8N377 158 aa10.54□□□□□ -0.72
CNOT3-204ENST00000447684 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
CNOT3-204ENST00000447684 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
CNOT3-204ENST00000447684 KRTAP1-3Q8IUG1 177 aa10.53□□□□□ -0.72
CNOT3-204ENST00000447684 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
CNOT3-204ENST00000447684 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.52□□□□□ -0.73
CNOT3-204ENST00000447684 F8P00451 2351 aa10.51□□□□□ -0.73
CNOT3-204ENST00000447684 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
CNOT3-204ENST00000447684 ST20-AS1Q8NBB2 130 aa10.51□□□□□ -0.73
CNOT3-204ENST00000447684 A8MUN3 132 aa10.51□□□□□ -0.73
CNOT3-204ENST00000447684 K7EQZ3 153 aa10.5□□□□□ -0.73
CNOT3-204ENST00000447684 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
CNOT3-204ENST00000447684 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
CNOT3-204ENST00000447684 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
CNOT3-204ENST00000447684 VWFP04275 2813 aa10.49□□□□□ -0.73
CNOT3-204ENST00000447684 A8MU10 97 aa10.49□□□□□ -0.73
CNOT3-204ENST00000447684 DEFB116Q30KQ4 102 aa10.48□□□□□ -0.73
CNOT3-204ENST00000447684 RPL37AP8A6NKH3 93 aa10.47□□□□□ -0.73
CNOT3-204ENST00000447684 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
CNOT3-204ENST00000447684 DSCR10P59022 87 aa10.46□□□□□ -0.74
CNOT3-204ENST00000447684 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.74
CNOT3-204ENST00000447684 LCE6AA0A183 80 aa10.45□□□□□ -0.74
CNOT3-204ENST00000447684 PSCAO43653 123 aa10.45□□□□□ -0.74
CNOT3-204ENST00000447684 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
CNOT3-204ENST00000447684 WFDC13Q8IUB5 93 aa10.44□□□□□ -0.74
CNOT3-204ENST00000447684 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
CNOT3-204ENST00000447684 C7orf33Q8WU49 177 aa10.43□□□□□ -0.74
CNOT3-204ENST00000447684 Q8NBF4 154 aa10.43□□□□□ -0.74
CNOT3-204ENST00000447684 A0A0G2JQZ4 141 aa10.42□□□□□ -0.74
CNOT3-204ENST00000447684 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
CNOT3-204ENST00000447684 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
CNOT3-204ENST00000447684 HCG22E2RYF7 251 aa10.41□□□□□ -0.74
CNOT3-204ENST00000447684 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
CNOT3-204ENST00000447684 SYCNQ0VAF6 134 aa10.4□□□□□ -0.74
CNOT3-204ENST00000447684 KCNQ1DNQ9H478 68 aa10.4□□□□□ -0.74
CNOT3-204ENST00000447684 CHKB-CPT1BH3BT56 60 aa10.39□□□□□ -0.75
CNOT3-204ENST00000447684 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
CNOT3-204ENST00000447684 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
CNOT3-204ENST00000447684 SPTSSBQ8NFR3 76 aa10.38□□□□□ -0.75
CNOT3-204ENST00000447684 Q9BRP9 147 aa10.38□□□□□ -0.75
CNOT3-204ENST00000447684 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
CNOT3-204ENST00000447684 MP68P56378 58 aa10.37□□□□□ -0.75
CNOT3-204ENST00000447684 RETNQ9HD89 108 aa10.37□□□□□ -0.75
CNOT3-204ENST00000447684 Q8NAQ8 132 aa10.37□□□□□ -0.75
CNOT3-204ENST00000447684 DHRS4-AS1Q9P1J3 65 aa10.37□□□□□ -0.75
CNOT3-204ENST00000447684 Q6ZRX8 168 aa10.37□□□□□ -0.75
CNOT3-204ENST00000447684 NDUFB1O75438 58 aa10.36□□□□□ -0.75
CNOT3-204ENST00000447684 Q5VV11 94 aa10.36□□□□□ -0.75
CNOT3-204ENST00000447684 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
CNOT3-204ENST00000447684 APOC4P55056 127 aa10.36□□□□□ -0.75
CNOT3-204ENST00000447684 HIVEP1P15822 2718 aa10.35□□□□□ -0.75
CNOT3-204ENST00000447684 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
CNOT3-204ENST00000447684 UBE2BP63146 152 aa10.35□□□□□ -0.75
CNOT3-204ENST00000447684 ANK3Q12955 4377 aaKnown RBP10.35□□□□□ -0.75
CNOT3-204ENST00000447684 PKD1L1Q8TDX9 2849 aa10.35□□□□□ -0.75
CNOT3-204ENST00000447684 A0A1B0GW54 56 aa10.33□□□□□ -0.76
CNOT3-204ENST00000447684 PRR15LQ9BU68 103 aa10.33□□□□□ -0.76
CNOT3-204ENST00000447684 KRTAP10-3P60369 221 aa10.33□□□□□ -0.76
CNOT3-204ENST00000447684 TNP2Q05952 138 aa10.33□□□□□ -0.76
CNOT3-204ENST00000447684 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
CNOT3-204ENST00000447684 KRTAP1-1Q07627 177 aa10.32□□□□□ -0.76
CNOT3-204ENST00000447684 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
CNOT3-204ENST00000447684 CD164Q04900 197 aa10.31□□□□□ -0.76
CNOT3-204ENST00000447684 BAHCC1Q9P281 2608 aa10.31□□□□□ -0.76
CNOT3-204ENST00000447684 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
CNOT3-204ENST00000447684 UBE2AP49459 152 aa10.3□□□□□ -0.76
CNOT3-204ENST00000447684 MRPL55Q7Z7F7 128 aaKnown RBP10.29□□□□□ -0.76
CNOT3-204ENST00000447684 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
CNOT3-204ENST00000447684 UBR5O95071 2799 aaPredicted RBP10.28□□□□□ -0.76
CNOT3-204ENST00000447684 C16orf90A8MZG2 172 aa10.27□□□□□ -0.76
CNOT3-204ENST00000447684 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
CNOT3-204ENST00000447684 A0A087WSZ3 146 aa10.26□□□□□ -0.77
CNOT3-204ENST00000447684 H0Y9P7 68 aa10.26□□□□□ -0.77
CNOT3-204ENST00000447684 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
CNOT3-204ENST00000447684 A6NED7 52 aa10.25□□□□□ -0.77
CNOT3-204ENST00000447684 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
CNOT3-204ENST00000447684 KRTAP4-16G5E9R7 235 aaPredicted RBP10.24□□□□□ -0.77
CNOT3-204ENST00000447684 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
CNOT3-204ENST00000447684 LINC00588Q9Y4M8 146 aa10.22□□□□□ -0.77
CNOT3-204ENST00000447684 USP24Q9UPU5 2620 aa10.22□□□□□ -0.77
CNOT3-204ENST00000447684 IGFL1Q6UW32 110 aa10.22□□□□□ -0.77
CNOT3-204ENST00000447684 KTN1-AS1Q86SY8 53 aa10.22□□□□□ -0.77
CNOT3-204ENST00000447684 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
CNOT3-204ENST00000447684 PDZD2O15018 2839 aa10.2□□□□□ -0.78
CNOT3-204ENST00000447684 NOTCH2Q04721 2471 aa10.2□□□□□ -0.78
CNOT3-204ENST00000447684 CASC2Q6XLA1 102 aa10.2□□□□□ -0.78
CNOT3-204ENST00000447684 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
CNOT3-204ENST00000447684 ATRQ13535 2644 aa10.19□□□□□ -0.78
CNOT3-204ENST00000447684 TRRAPQ9Y4A5 3859 aa10.18□□□□□ -0.78
CNOT3-204ENST00000447684 SPRR1AP35321 89 aa10.18□□□□□ -0.78
CNOT3-204ENST00000447684 LCA10Q71F78 164 aa10.18□□□□□ -0.78
CNOT3-204ENST00000447684 ITPR2Q14571 2701 aa10.17□□□□□ -0.78
CNOT3-204ENST00000447684 H3BNG1 76 aa10.16□□□□□ -0.78
CNOT3-204ENST00000447684 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
CNOT3-204ENST00000447684 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms