RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
MSH6-204ENST00000445503 MGAM2Q2M2H8 2515 aa7.95□□□□□ -1.14
MSH6-204ENST00000445503 LRCOL1A6NCL2 159 aa7.95□□□□□ -1.14
MSH6-204ENST00000445503 ESRGQ1W209 222 aa7.95□□□□□ -1.14
MSH6-204ENST00000445503 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
MSH6-204ENST00000445503 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
MSH6-204ENST00000445503 PSCAO43653 123 aa7.94□□□□□ -1.14
MSH6-204ENST00000445503 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
MSH6-204ENST00000445503 TM2D3Q9BRN9 247 aa7.93□□□□□ -1.14
MSH6-204ENST00000445503 LINC00336Q6ZUF6 198 aa7.92□□□□□ -1.14
MSH6-204ENST00000445503 ELOF1P60002 83 aaKnown RBP7.92□□□□□ -1.14
MSH6-204ENST00000445503 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
MSH6-204ENST00000445503 Q6ZRP5 223 aa7.91□□□□□ -1.14
MSH6-204ENST00000445503 FAM30AQ9NZY2 134 aa7.9□□□□□ -1.14
MSH6-204ENST00000445503 RPS28P62857 69 aaKnown RBP7.9□□□□□ -1.14
MSH6-204ENST00000445503 H3BS24 57 aa7.9□□□□□ -1.15
MSH6-204ENST00000445503 VWFP04275 2813 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 HIGD2AQ9BW72 106 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 STAB1Q9NY15 2570 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 CXCL6P80162 114 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 C7orf33Q8WU49 177 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 UBE2DNLQ8IWF7 75 aa7.89□□□□□ -1.15
MSH6-204ENST00000445503 NBEAL1Q6ZS30 2694 aa7.88□□□□□ -1.15
MSH6-204ENST00000445503 GVQW2A0A096LPI5 108 aaPredicted RBP7.88□□□□□ -1.15
MSH6-204ENST00000445503 A0A096LNI7 61 aa7.87□□□□□ -1.15
MSH6-204ENST00000445503 PRR4Q16378 134 aa7.87□□□□□ -1.15
MSH6-204ENST00000445503 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
MSH6-204ENST00000445503 TMEM254Q8TBM7 123 aa7.86□□□□□ -1.15
MSH6-204ENST00000445503 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
MSH6-204ENST00000445503 DEFB116Q30KQ4 102 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 C15orf56Q8N910 161 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
MSH6-204ENST00000445503 PSPHP1O15172 72 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 BAHCC1Q9P281 2608 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 ST20-AS1Q8NBB2 130 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 WIPF1O43516 503 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
MSH6-204ENST00000445503 TRBV7-4A0A0J9YYF1 115 aa7.84□□□□□ -1.15
MSH6-204ENST00000445503 MDFIQ99750 246 aa7.84□□□□□ -1.15
MSH6-204ENST00000445503 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.15
MSH6-204ENST00000445503 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 H7BZZ5 65 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 WFDC13Q8IUB5 93 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 NBPF19A0A087WUL8 3843 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 A6NED7 52 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 COL6A5A8TX70 2615 aa7.82□□□□□ -1.16
MSH6-204ENST00000445503 NDUFC1O43677 76 aa7.81□□□□□ -1.16
MSH6-204ENST00000445503 NSD1Q96L73 2696 aaPredicted RBP7.81□□□□□ -1.16
MSH6-204ENST00000445503 LINC01556Q5JQF7 62 aa7.81□□□□□ -1.16
MSH6-204ENST00000445503 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
MSH6-204ENST00000445503 TRBV7-6A0A0J9YX20 115 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 OXTP01178 125 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 PRYO14603 147 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 KRTAP10-11P60412 298 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 SMIM29Q86T20 159 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 A0A0G2JQZ4 141 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 A0A1W2PNN7 141 aa7.8□□□□□ -1.16
MSH6-204ENST00000445503 TENM4Q6N022 2769 aa7.79□□□□□ -1.16
MSH6-204ENST00000445503 CD164Q04900 197 aa7.79□□□□□ -1.16
MSH6-204ENST00000445503 Q8N377 158 aa7.79□□□□□ -1.16
MSH6-204ENST00000445503 PRLHP81277 87 aa7.78□□□□□ -1.16
MSH6-204ENST00000445503 CASC10Q5T4H9 136 aa7.78□□□□□ -1.16
MSH6-204ENST00000445503 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.17
MSH6-204ENST00000445503 BCE1O60756 84 aa7.77□□□□□ -1.17
MSH6-204ENST00000445503 UBE2AP49459 152 aa7.77□□□□□ -1.17
MSH6-204ENST00000445503 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
MSH6-204ENST00000445503 Q6ZRX8 168 aa7.76□□□□□ -1.17
MSH6-204ENST00000445503 H3BNG1 76 aa7.75□□□□□ -1.17
MSH6-204ENST00000445503 ZNF469Q96JG9 3925 aaPredicted RBP7.75□□□□□ -1.17
MSH6-204ENST00000445503 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
MSH6-204ENST00000445503 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
MSH6-204ENST00000445503 KCNQ1DNQ9H478 68 aa7.74□□□□□ -1.17
MSH6-204ENST00000445503 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
MSH6-204ENST00000445503 A0A087WSZ3 146 aa7.74□□□□□ -1.17
MSH6-204ENST00000445503 MP68P56378 58 aa7.73□□□□□ -1.17
MSH6-204ENST00000445503 ERC2-IT1O76042 136 aa7.72□□□□□ -1.17
MSH6-204ENST00000445503 H0Y9J4 135 aa7.72□□□□□ -1.17
MSH6-204ENST00000445503 PDZD2O15018 2839 aa7.72□□□□□ -1.17
MSH6-204ENST00000445503 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
MSH6-204ENST00000445503 Q8NBF4 154 aa7.71□□□□□ -1.17
MSH6-204ENST00000445503 A0A1W2PNM2 257 aa7.7□□□□□ -1.18
MSH6-204ENST00000445503 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
MSH6-204ENST00000445503 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
MSH6-204ENST00000445503 IGLV1-50A0A075B6I6 118 aa7.7□□□□□ -1.18
MSH6-204ENST00000445503 K7EQZ3 153 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 LINC00476Q8WZB0 136 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 Q9BRP9 147 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 Q5XG85 94 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 PKD1L1Q8TDX9 2849 aa7.69□□□□□ -1.18
MSH6-204ENST00000445503 TENM3Q9P273 2699 aa7.68□□□□□ -1.18
MSH6-204ENST00000445503 LINC00208Q96KT6 92 aa7.68□□□□□ -1.18
MSH6-204ENST00000445503 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
MSH6-204ENST00000445503 NDUFS5O43920 106 aa7.67□□□□□ -1.18
MSH6-204ENST00000445503 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
MSH6-204ENST00000445503 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
MSH6-204ENST00000445503 CDK2AP2O75956 126 aa7.63□□□□□ -1.19
MSH6-204ENST00000445503 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms