RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ADGRG4Q8IZF6 3080 aa11□□□□□ -0.65
TCOF1-206ENST00000445265 IGLV1-50A0A075B6I6 118 aa11□□□□□ -0.65
TCOF1-206ENST00000445265 C16orf90A8MZG2 172 aa10.99□□□□□ -0.65
TCOF1-206ENST00000445265 A6NED7 52 aa10.98□□□□□ -0.65
TCOF1-206ENST00000445265 BOD1L1Q8NFC6 3051 aa10.98□□□□□ -0.65
TCOF1-206ENST00000445265 C1orf195Q5TG92 126 aa10.98□□□□□ -0.65
TCOF1-206ENST00000445265 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
TCOF1-206ENST00000445265 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
TCOF1-206ENST00000445265 PRO0628Q9UI54 55 aa10.96□□□□□ -0.65
TCOF1-206ENST00000445265 FAM168BA1KXE4 195 aa10.96□□□□□ -0.65
TCOF1-206ENST00000445265 Q8N377 158 aa10.95□□□□□ -0.66
TCOF1-206ENST00000445265 TLX1NBP0CAT3 122 aa10.94□□□□□ -0.66
TCOF1-206ENST00000445265 USP24Q9UPU5 2620 aa10.94□□□□□ -0.66
TCOF1-206ENST00000445265 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
TCOF1-206ENST00000445265 C1orf64Q8NEQ6 169 aa10.94□□□□□ -0.66
TCOF1-206ENST00000445265 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
TCOF1-206ENST00000445265 PSPHP1O15172 72 aa10.93□□□□□ -0.66
TCOF1-206ENST00000445265 KALRNO60229 2985 aa10.92□□□□□ -0.66
TCOF1-206ENST00000445265 HELZ2Q9BYK8 2649 aaKnown RBP10.92□□□□□ -0.66
TCOF1-206ENST00000445265 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
TCOF1-206ENST00000445265 IGLV5-52A0A0A0MRZ9 124 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 LY6G6CO95867 125 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
TCOF1-206ENST00000445265 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 H3BPC8 53 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 H7BZZ5 65 aa10.91□□□□□ -0.66
TCOF1-206ENST00000445265 SEC61GP60059 68 aa10.9□□□□□ -0.66
TCOF1-206ENST00000445265 CHD6Q8TD26 2715 aa10.9□□□□□ -0.66
TCOF1-206ENST00000445265 CIRBP-AS1Q8TBR5 109 aa10.9□□□□□ -0.66
TCOF1-206ENST00000445265 COL6A3P12111 3177 aa10.89□□□□□ -0.67
TCOF1-206ENST00000445265 K7EQZ3 153 aa10.88□□□□□ -0.67
TCOF1-206ENST00000445265 IGSF10Q6WRI0 2623 aa10.88□□□□□ -0.67
TCOF1-206ENST00000445265 MDFIQ99750 246 aa10.88□□□□□ -0.67
TCOF1-206ENST00000445265 TP53AIP1Q9HCN2 124 aa10.88□□□□□ -0.67
TCOF1-206ENST00000445265 EYSQ5T1H1 3165 aa10.87□□□□□ -0.67
TCOF1-206ENST00000445265 FREM2Q5SZK8 3169 aa10.84□□□□□ -0.67
TCOF1-206ENST00000445265 ATMQ13315 3056 aa10.84□□□□□ -0.67
TCOF1-206ENST00000445265 C1orf134Q5TEV5 83 aa10.83□□□□□ -0.68
TCOF1-206ENST00000445265 NBDYA0A0U1RRE5 68 aa10.83□□□□□ -0.68
TCOF1-206ENST00000445265 CHTF8P0CG12 524 aa10.83□□□□□ -0.68
TCOF1-206ENST00000445265 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
TCOF1-206ENST00000445265 IGFL1Q6UW32 110 aa10.83□□□□□ -0.68
TCOF1-206ENST00000445265 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
TCOF1-206ENST00000445265 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
TCOF1-206ENST00000445265 LRBAP50851 2863 aa10.82□□□□□ -0.68
TCOF1-206ENST00000445265 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
TCOF1-206ENST00000445265 RPL37AP61513 92 aaKnown RBP10.81□□□□□ -0.68
TCOF1-206ENST00000445265 TEX15Q9BXT5 2789 aa10.81□□□□□ -0.68
TCOF1-206ENST00000445265 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
TCOF1-206ENST00000445265 DMXL2Q8TDJ6 3036 aa10.81□□□□□ -0.68
TCOF1-206ENST00000445265 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
TCOF1-206ENST00000445265 MOBPQ13875 183 aa10.8□□□□□ -0.68
TCOF1-206ENST00000445265 A0A1W2PNM2 257 aa10.8□□□□□ -0.68
TCOF1-206ENST00000445265 A8MWP4 228 aa10.8□□□□□ -0.68
TCOF1-206ENST00000445265 Q8NDZ9 215 aa10.79□□□□□ -0.68
TCOF1-206ENST00000445265 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-206ENST00000445265 WIPF1O43516 503 aa10.79□□□□□ -0.68
TCOF1-206ENST00000445265 FLNCQ14315 2725 aa10.78□□□□□ -0.68
TCOF1-206ENST00000445265 IGLV5-37A0A075B6J1 123 aa10.78□□□□□ -0.68
TCOF1-206ENST00000445265 K7EIL1 84 aa10.77□□□□□ -0.69
TCOF1-206ENST00000445265 MAST4O15021 2626 aa10.76□□□□□ -0.69
TCOF1-206ENST00000445265 TACC2O95359 2948 aa10.76□□□□□ -0.69
TCOF1-206ENST00000445265 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
TCOF1-206ENST00000445265 PRR15Q8IV56 129 aa10.73□□□□□ -0.69
TCOF1-206ENST00000445265 RTL8CO15255 209 aa10.7□□□□□ -0.7
TCOF1-206ENST00000445265 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
TCOF1-206ENST00000445265 C9orf163Q8N9P6 203 aa10.69□□□□□ -0.7
TCOF1-206ENST00000445265 USP34Q70CQ2 3546 aa10.69□□□□□ -0.7
TCOF1-206ENST00000445265 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
TCOF1-206ENST00000445265 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
TCOF1-206ENST00000445265 A0A1W2PNN7 141 aa10.68□□□□□ -0.7
TCOF1-206ENST00000445265 SETXQ7Z333 2677 aaKnown RBP10.68□□□□□ -0.7
TCOF1-206ENST00000445265 UNC79Q9P2D8 2635 aa10.67□□□□□ -0.7
TCOF1-206ENST00000445265 NBEAL2Q6ZNJ1 2754 aa10.67□□□□□ -0.7
TCOF1-206ENST00000445265 COL12A1Q99715 3063 aa10.67□□□□□ -0.7
TCOF1-206ENST00000445265 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
TCOF1-206ENST00000445265 LOC400499M0QZD8 3231 aa10.65□□□□□ -0.7
TCOF1-206ENST00000445265 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
TCOF1-206ENST00000445265 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
TCOF1-206ENST00000445265 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
TCOF1-206ENST00000445265 MYO15AQ9UKN7 3530 aa10.63□□□□□ -0.71
TCOF1-206ENST00000445265 CYSTM1Q9H1C7 97 aa10.63□□□□□ -0.71
TCOF1-206ENST00000445265 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
TCOF1-206ENST00000445265 ACYP2P14621 99 aa10.61□□□□□ -0.71
TCOF1-206ENST00000445265 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
TCOF1-206ENST00000445265 ZZEF1O43149 2961 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 SPRR1AP35321 89 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 DSCR10P59022 87 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 C8orf17Q9NRJ1 99 aa10.59□□□□□ -0.71
TCOF1-206ENST00000445265 A8MUN3 132 aa10.57□□□□□ -0.72
TCOF1-206ENST00000445265 K7ERS5 55 aa10.57□□□□□ -0.72
TCOF1-206ENST00000445265 KRTAP26-1Q6PEX3 210 aa10.57□□□□□ -0.72
TCOF1-206ENST00000445265 APLNQ9ULZ1 77 aa10.56□□□□□ -0.72
TCOF1-206ENST00000445265 CFAP47Q6ZTR5 3102 aa10.56□□□□□ -0.72
TCOF1-206ENST00000445265 COA5Q86WW8 74 aa10.56□□□□□ -0.72
TCOF1-206ENST00000445265 C8orf87E5RJ46 101 aa10.54□□□□□ -0.72
TCOF1-206ENST00000445265 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms