RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.21
FN1-211ENST00000443816 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.21
FN1-211ENST00000443816 KRTAP10-3P60369 221 aa7.46□□□□□ -1.21
FN1-211ENST00000443816 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
FN1-211ENST00000443816 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
FN1-211ENST00000443816 AKAP13Q12802 2813 aa7.45□□□□□ -1.22
FN1-211ENST00000443816 FAM218AQ96MZ4 157 aa7.45□□□□□ -1.22
FN1-211ENST00000443816 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
FN1-211ENST00000443816 KMT2BQ9UMN6 2715 aaPredicted RBP7.44□□□□□ -1.22
FN1-211ENST00000443816 PLA2G2DQ9UNK4 145 aa7.44□□□□□ -1.22
FN1-211ENST00000443816 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
FN1-211ENST00000443816 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
FN1-211ENST00000443816 MAST4O15021 2626 aa7.43□□□□□ -1.22
FN1-211ENST00000443816 TLX1NBP0CAT3 122 aa7.42□□□□□ -1.22
FN1-211ENST00000443816 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
FN1-211ENST00000443816 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
FN1-211ENST00000443816 C9orf163Q8N9P6 203 aa7.42□□□□□ -1.22
FN1-211ENST00000443816 ATRQ13535 2644 aa7.42□□□□□ -1.22
FN1-211ENST00000443816 CHD7Q9P2D1 2997 aa7.42□□□□□ -1.22
FN1-211ENST00000443816 KRTAP1-3Q8IUG1 177 aa7.41□□□□□ -1.22
FN1-211ENST00000443816 MKI67P46013 3256 aaKnown RBP7.4□□□□□ -1.23
FN1-211ENST00000443816 IGLV7-43P04211 117 aa7.39□□□□□ -1.23
FN1-211ENST00000443816 APLNQ9ULZ1 77 aa7.39□□□□□ -1.23
FN1-211ENST00000443816 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
FN1-211ENST00000443816 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
FN1-211ENST00000443816 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
FN1-211ENST00000443816 ZNF575Q86XF7 245 aa7.38□□□□□ -1.23
FN1-211ENST00000443816 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
FN1-211ENST00000443816 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
FN1-211ENST00000443816 CFAP54Q96N23 3096 aa7.37□□□□□ -1.23
FN1-211ENST00000443816 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
FN1-211ENST00000443816 LINC00528Q8N1L1 170 aa7.36□□□□□ -1.23
FN1-211ENST00000443816 CENPEQ02224 2701 aa7.36□□□□□ -1.23
FN1-211ENST00000443816 IGFL1Q6UW32 110 aa7.35□□□□□ -1.23
FN1-211ENST00000443816 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
FN1-211ENST00000443816 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
FN1-211ENST00000443816 DSCR10P59022 87 aa7.34□□□□□ -1.23
FN1-211ENST00000443816 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
FN1-211ENST00000443816 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.24
FN1-211ENST00000443816 TEX15Q9BXT5 2789 aa7.33□□□□□ -1.24
FN1-211ENST00000443816 K7EQZ3 153 aa7.33□□□□□ -1.24
FN1-211ENST00000443816 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
FN1-211ENST00000443816 IGLV5-37A0A075B6J1 123 aa7.32□□□□□ -1.24
FN1-211ENST00000443816 PRR15Q8IV56 129 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 XIRP2A4UGR9 3374 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 TRANK1O15050 2925 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 LITAFQ99732 161 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 C8orf17Q9NRJ1 99 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 CASC10Q5T4H9 136 aa7.31□□□□□ -1.24
FN1-211ENST00000443816 Q8N377 158 aa7.3□□□□□ -1.24
FN1-211ENST00000443816 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
FN1-211ENST00000443816 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
FN1-211ENST00000443816 SPRR4Q96PI1 79 aa7.28□□□□□ -1.24
FN1-211ENST00000443816 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
FN1-211ENST00000443816 PRUNE2Q8WUY3 3088 aa7.27□□□□□ -1.25
FN1-211ENST00000443816 PRO0461Q9UI25 63 aa7.26□□□□□ -1.25
FN1-211ENST00000443816 CHD6Q8TD26 2715 aa7.25□□□□□ -1.25
FN1-211ENST00000443816 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
FN1-211ENST00000443816 MGAQ8IWI9 3026 aa7.25□□□□□ -1.25
FN1-211ENST00000443816 ANAPC11Q9NYG5 84 aa7.24□□□□□ -1.25
FN1-211ENST00000443816 UQCR11O14957 56 aa7.23□□□□□ -1.25
FN1-211ENST00000443816 COA5Q86WW8 74 aa7.23□□□□□ -1.25
FN1-211ENST00000443816 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
FN1-211ENST00000443816 LAMA3Q16787 3333 aa7.22□□□□□ -1.25
FN1-211ENST00000443816 TNP2Q05952 138 aa7.22□□□□□ -1.25
FN1-211ENST00000443816 Q6ZSA8 131 aa7.21□□□□□ -1.26
FN1-211ENST00000443816 CD164Q04900 197 aa7.21□□□□□ -1.26
FN1-211ENST00000443816 ITPR2Q14571 2701 aa7.21□□□□□ -1.26
FN1-211ENST00000443816 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
FN1-211ENST00000443816 BRCA2P51587 3418 aa7.19□□□□□ -1.26
FN1-211ENST00000443816 BAHCC1Q9P281 2608 aa7.19□□□□□ -1.26
FN1-211ENST00000443816 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
FN1-211ENST00000443816 WIPF1O43516 503 aa7.19□□□□□ -1.26
FN1-211ENST00000443816 STAB1Q9NY15 2570 aa7.18□□□□□ -1.26
FN1-211ENST00000443816 RANBP2P49792 3224 aaKnown RBP7.18□□□□□ -1.26
FN1-211ENST00000443816 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
FN1-211ENST00000443816 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
FN1-211ENST00000443816 HTTP42858 3142 aa7.17□□□□□ -1.26
FN1-211ENST00000443816 M0R2T5 61 aa7.16□□□□□ -1.26
FN1-211ENST00000443816 VPS13AQ96RL7 3174 aa7.16□□□□□ -1.26
FN1-211ENST00000443816 PRO0628Q9UI54 55 aa7.16□□□□□ -1.26
FN1-211ENST00000443816 UNC79Q9P2D8 2635 aa7.15□□□□□ -1.26
FN1-211ENST00000443816 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
FN1-211ENST00000443816 ZNF292O60281 2723 aa7.13□□□□□ -1.27
FN1-211ENST00000443816 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
FN1-211ENST00000443816 TRIOO75962 3097 aa7.13□□□□□ -1.27
FN1-211ENST00000443816 TEP1Q99973 2627 aaKnown RBP7.13□□□□□ -1.27
FN1-211ENST00000443816 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
FN1-211ENST00000443816 A0A0C4DFX4 3053 aa7.13□□□□□ -1.27
FN1-211ENST00000443816 CELSR3Q9NYQ7 3312 aa7.11□□□□□ -1.27
FN1-211ENST00000443816 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
FN1-211ENST00000443816 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
FN1-211ENST00000443816 CHD9Q3L8U1 2897 aa7.1□□□□□ -1.27
FN1-211ENST00000443816 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
FN1-211ENST00000443816 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
FN1-211ENST00000443816 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
FN1-211ENST00000443816 PRR26Q8N8Z3 221 aa7.08□□□□□ -1.28
FN1-211ENST00000443816 FAM104AQ969W3 186 aa7.07□□□□□ -1.28
FN1-211ENST00000443816 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
FN1-211ENST00000443816 A8MUN3 132 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms