RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 HERC1Q15751 4861 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 C3orf79P0CE67 100 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 MT4P47944 62 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 GAFA1Q96PS6 74 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 TIAM2Q8IVF5 1701 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 SPG11Q96JI7 2443 aa-0.67□□□□□ -2.52
CDC40-204ENST00000431461 PCLOQ9Y6V0 5065 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 NBASA2RRP1 2371 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 KMT2CQ8NEZ4 4911 aaKnown RBP-0.68□□□□□ -2.52
CDC40-204ENST00000431461 M0R143 59 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 NDUFB1O75438 58 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 KRTAP20-2Q3LI61 65 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 ATP7BP35670 1465 aa-0.68□□□□□ -2.52
CDC40-204ENST00000431461 VPS8Q8N3P4 1428 aa-0.69□□□□□ -2.52
CDC40-204ENST00000431461 NCMAPQ5T1S8 102 aa-0.69□□□□□ -2.52
CDC40-204ENST00000431461 LELP1Q5T871 98 aa-0.69□□□□□ -2.52
CDC40-204ENST00000431461 IQCF6A8MYZ5 107 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 H3BNG1 76 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 PDE4DIPQ5VU43 2346 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.7□□□□□ -2.52
CDC40-204ENST00000431461 LRRC7Q96NW7 1537 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 EPG5Q9HCE0 2579 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 PEG3Q9GZU2 1588 aa-0.7□□□□□ -2.52
CDC40-204ENST00000431461 NDUFA3O95167 84 aa-0.71□□□□□ -2.52
CDC40-204ENST00000431461 S100A8P05109 93 aa-0.71□□□□□ -2.52
CDC40-204ENST00000431461 HIVEP1P15822 2718 aa-0.71□□□□□ -2.52
CDC40-204ENST00000431461 MYO3AQ8NEV4 1616 aa-0.71□□□□□ -2.52
CDC40-204ENST00000431461 ANKRD50Q9ULJ7 1429 aa-0.72□□□□□ -2.52
CDC40-204ENST00000431461 HMGA1P17096 107 aaKnown RBP-0.72□□□□□ -2.52
CDC40-204ENST00000431461 PRO3102Q9H379 93 aa-0.72□□□□□ -2.52
CDC40-204ENST00000431461 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.72□□□□□ -2.53
CDC40-204ENST00000431461 TEP1Q99973 2627 aaKnown RBP-0.73□□□□□ -2.53
CDC40-204ENST00000431461 C4AP0C0L4 1744 aa-0.73□□□□□ -2.53
CDC40-204ENST00000431461 C4BP0C0L5 1744 aa-0.73□□□□□ -2.53
CDC40-204ENST00000431461 CEP162Q5TB80 1403 aa-0.73□□□□□ -2.53
CDC40-204ENST00000431461 PYY3Q5JQD4 70 aa-0.74□□□□□ -2.53
CDC40-204ENST00000431461 PLXNC1O60486 1568 aa-0.74□□□□□ -2.53
CDC40-204ENST00000431461 TRANK1O15050 2925 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 SUPT6HQ7KZ85 1726 aaKnown RBP-0.75□□□□□ -2.53
CDC40-204ENST00000431461 REV3LO60673 3130 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 FAT1Q14517 4588 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 MYMXA0A1B0GTQ4 84 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 PKIAP61925 76 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 SNRPFP62306 86 aaKnown RBP-0.75□□□□□ -2.53
CDC40-204ENST00000431461 WFDC9Q8NEX5 89 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 RABAC1Q9UI14 185 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 CCNB3Q8WWL7 1395 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 DEPDC5O75140 1603 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 AKAP13Q12802 2813 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 ANKRD26Q9UPS8 1709 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 TACC2O95359 2948 aa-0.75□□□□□ -2.53
CDC40-204ENST00000431461 TRAV21A0A0B4J279 112 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 ACYP1P07311 99 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 LINC00158P58513 81 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 PLIN4Q96Q06 1357 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 CCDC88BA6NC98 1476 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 NWD1Q149M9 1564 aa-0.76□□□□□ -2.53
CDC40-204ENST00000431461 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.76□□□□□ -2.53
CDC40-204ENST00000431461 HECTD1Q9ULT8 2610 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 LTN1O94822 1766 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 RGPD1P0DJD0 1748 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 WIZO95785 1651 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 ABCC10Q5T3U5 1492 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 LINC00643Q86TS7 51 aa-0.77□□□□□ -2.53
CDC40-204ENST00000431461 POLR1AO95602 1720 aaPredicted RBP-0.78□□□□□ -2.53
CDC40-204ENST00000431461 NESP48681 1621 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 URB2Q14146 1524 aaKnown RBP-0.78□□□□□ -2.53
CDC40-204ENST00000431461 NEXMIFQ5QGS0 1516 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 MAGI3Q5TCQ9 1506 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 CEBPZOSA8MTT3 80 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 PRLHP81277 87 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 C20orf78Q9BR46 151 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 RGPD3A6NKT7 1758 aaPredicted RBP-0.78□□□□□ -2.53
CDC40-204ENST00000431461 RGPD4Q7Z3J3 1758 aa-0.78□□□□□ -2.53
CDC40-204ENST00000431461 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.79□□□□□ -2.54
CDC40-204ENST00000431461 PKD1P98161 4303 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 HTTP42858 3142 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 TNRC18O15417 2968 aaPredicted RBP-0.79□□□□□ -2.54
CDC40-204ENST00000431461 LCE6AA0A183 80 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 PVALEFA0A1B0GWK0 134 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 IFI27P40305 119 aaPredicted RBP-0.79□□□□□ -2.54
CDC40-204ENST00000431461 SNHG12Q9BXW3 62 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 Q9H521 79 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 AKAP12Q02952 1782 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 DNAH6Q9C0G6 4158 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 ABCC3O15438 1527 aa-0.79□□□□□ -2.54
CDC40-204ENST00000431461 NEBP20929 6669 aa-0.8□□□□□ -2.54
CDC40-204ENST00000431461 LYNX1G3V0Z9 82 aa-0.8□□□□□ -2.54
CDC40-204ENST00000431461 THOC2Q8NI27 1593 aaKnown RBP-0.8□□□□□ -2.54
CDC40-204ENST00000431461 PRRC2CQ9Y520 2896 aaKnown RBP-0.8□□□□□ -2.54
CDC40-204ENST00000431461 NBPF19A0A087WUL8 3843 aa-0.8□□□□□ -2.54
CDC40-204ENST00000431461 USP32Q8NFA0 1604 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 LAMA1P25391 3075 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 V9GYS6 101 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 ANKRD11Q6UB99 2663 aaPredicted RBP-0.81□□□□□ -2.54
CDC40-204ENST00000431461 MAP3K1Q13233 1512 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 FAT3Q8TDW7 4589 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 MTORP42345 2549 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 HERC2O95714 4834 aa-0.81□□□□□ -2.54
CDC40-204ENST00000431461 ITPR3Q14573 2671 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms