RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 CYB5AP00167 134 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 PRKDCP78527 4128 aaKnown RBP-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 KIAA1109Q2LD37 5005 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 GAFA1Q96PS6 74 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 C20orf78Q9BR46 151 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 EPPK1P58107 5090 aaKnown RBP-0.34□□□□□ -2.46
HDAC9-205ENST00000411993 MYO3AQ8NEV4 1616 aa-0.35□□□□□ -2.46
HDAC9-205ENST00000411993 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.46
HDAC9-205ENST00000411993 LRRC9Q6ZRR7 1453 aa-0.35□□□□□ -2.46
HDAC9-205ENST00000411993 ADAMTS12P58397 1594 aa-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 SPRR2EP22531 72 aa-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 CICQ96RK0 1608 aaPredicted RBP-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 TGP01266 2768 aa-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 NBASA2RRP1 2371 aa-0.35□□□□□ -2.47
HDAC9-205ENST00000411993 HYDINQ4G0P3 5121 aa-0.36□□□□□ -2.47
HDAC9-205ENST00000411993 NDUFA3O95167 84 aa-0.36□□□□□ -2.47
HDAC9-205ENST00000411993 COX6B2Q6YFQ2 88 aa-0.36□□□□□ -2.47
HDAC9-205ENST00000411993 ATP7BP35670 1465 aa-0.36□□□□□ -2.47
HDAC9-205ENST00000411993 RGPD8O14715 1765 aaPredicted RBP-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 RGPD5Q99666 1765 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 CEP162Q5TB80 1403 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 NEXMIFQ5QGS0 1516 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 FAT3Q8TDW7 4589 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 RGPD1P0DJD0 1748 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 UBR1Q8IWV7 1749 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 WFDC9Q8NEX5 89 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 Q9H521 79 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 NF1P21359 2839 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 SVEP1Q4LDE5 3571 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 PKHD1P08F94 4074 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 PDE4DIPQ5VU43 2346 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 RGPD4Q7Z3J3 1758 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 AKAP13Q12802 2813 aa-0.37□□□□□ -2.47
HDAC9-205ENST00000411993 C4AP0C0L4 1744 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 C4BP0C0L5 1744 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 HECTD1Q9ULT8 2610 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 MXRA5Q9NR99 2828 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 HERC1Q15751 4861 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 TRAV21A0A0B4J279 112 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 MYMXA0A1B0GTQ4 84 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 KRTAP20-1Q3LI63 56 aa-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 SUPT6HQ7KZ85 1726 aaKnown RBP-0.38□□□□□ -2.47
HDAC9-205ENST00000411993 RGPD3A6NKT7 1758 aaPredicted RBP-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 SONP18583 2426 aaKnown RBP-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 PYY3Q5JQD4 70 aa-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 TROQ12816 1431 aaPredicted RBP-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 SPG11Q96JI7 2443 aa-0.39□□□□□ -2.47
HDAC9-205ENST00000411993 EPG5Q9HCE0 2579 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 TRANK1O15050 2925 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 STARD9Q9P2P6 4700 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 CCNB3Q8WWL7 1395 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 TIAM2Q8IVF5 1701 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 SNRPFP62306 86 aaKnown RBP-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 S100A16Q96FQ6 103 aaKnown RBP-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 V9GYS6 101 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 FAT1Q14517 4588 aa-0.4□□□□□ -2.47
HDAC9-205ENST00000411993 POLR1AO95602 1720 aaPredicted RBP-0.41□□□□□ -2.47
HDAC9-205ENST00000411993 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.41□□□□□ -2.47
HDAC9-205ENST00000411993 LTN1O94822 1766 aa-0.41□□□□□ -2.47
HDAC9-205ENST00000411993 CEBPZOSA8MTT3 80 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 H3BNG1 76 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 K7EP34 96 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 NDUFB1O75438 58 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 LINC00643Q86TS7 51 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 PRO3102Q9H379 93 aa-0.41□□□□□ -2.48
HDAC9-205ENST00000411993 PLIN4Q96Q06 1357 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 C3orf79P0CE67 100 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 MT4P47944 62 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 LINC00158P58513 81 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 RABAC1Q9UI14 185 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 NWD1Q149M9 1564 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 HIVEP1P15822 2718 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 TMEM131LA2VDJ0 1609 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 USP32Q8NFA0 1604 aa-0.42□□□□□ -2.48
HDAC9-205ENST00000411993 PRRC2CQ9Y520 2896 aaKnown RBP-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 ABCC3O15438 1527 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 PVALEFA0A1B0GWK0 134 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 ACYP1P07311 99 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 KRTAP20-2Q3LI61 65 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 SPRR2FQ96RM1 72 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 NESP48681 1621 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 REV3LO60673 3130 aa-0.43□□□□□ -2.48
HDAC9-205ENST00000411993 DOT1LQ8TEK3 1739 aa-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 TNRC18O15417 2968 aaPredicted RBP-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 TTC37Q6PGP7 1564 aa-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 FASNP49327 2511 aaKnown RBP-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 KIF14Q15058 1648 aa-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 NCOA2Q15596 1464 aa-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 URB2Q14146 1524 aaKnown RBP-0.44□□□□□ -2.48
HDAC9-205ENST00000411993 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 SCN11AQ9UI33 1791 aa-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 C9orf92A6NGG3 77 aa-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 MT1AP04731 61 aa-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 IFI27P40305 119 aaPredicted RBP-0.45□□□□□ -2.48
HDAC9-205ENST00000411993 DEFA5Q01523 94 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms