RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 A0A1B0GU69 56 aa3.22□□□□□ -1.89
SCN3A-203ENST00000409101 ANKRD17O75179 2603 aaKnown RBP3.22□□□□□ -1.89
SCN3A-203ENST00000409101 M0R2T5 61 aa3.22□□□□□ -1.89
SCN3A-203ENST00000409101 ABCA12Q86UK0 2595 aa3.21□□□□□ -1.89
SCN3A-203ENST00000409101 LITAFQ99732 161 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 CCDC179H3BU77 68 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.2□□□□□ -1.9
SCN3A-203ENST00000409101 BAHCC1Q9P281 2608 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 MYO18BQ8IUG5 2567 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0C4DFX4 3053 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 KRTAP21-3Q3LHN1 58 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 F8P00451 2351 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 TNRC18O15417 2968 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-203ENST00000409101 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
SCN3A-203ENST00000409101 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 PCNTO95613 3336 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 K7EQZ3 153 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 Q8N377 158 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 CD164Q04900 197 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 UNC79Q9P2D8 2635 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 FAM229BQ4G0N7 80 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 PRR15Q8IV56 129 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 ZFYVE26Q68DK2 2539 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 PSPHP1O15172 72 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 C2CD3Q4AC94 2353 aa3.16□□□□□ -1.9
SCN3A-203ENST00000409101 FN1P02751 2386 aaKnown RBP3.15□□□□□ -1.91
SCN3A-203ENST00000409101 OXTP01178 125 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
SCN3A-203ENST00000409101 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 USP9XQ93008 2570 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-203ENST00000409101 CR1P17927 2039 aa3.13□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP10-2P60368 255 aa3.13□□□□□ -1.91
SCN3A-203ENST00000409101 SMCPP49901 116 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-203ENST00000409101 POLQO75417 2590 aa3.12□□□□□ -1.91
SCN3A-203ENST00000409101 MAST4O15021 2626 aa3.12□□□□□ -1.91
SCN3A-203ENST00000409101 HECTD1Q9ULT8 2610 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 MYO9AB2RTY4 2548 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 IGLV5-48A0A075B6I7 105 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 EIF4EBP3O60516 100 aaPredicted RBP3.11□□□□□ -1.91
SCN3A-203ENST00000409101 CHD6Q8TD26 2715 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 Q8N1X5 172 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 COA5Q86WW8 74 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 ACANP16112 2415 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 TLN2Q9Y4G6 2542 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 MUC4Q99102 2169 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 A0A1W2PNM2 257 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 Q6ZR54 194 aa3.08□□□□□ -1.92
SCN3A-203ENST00000409101 TRANK1O15050 2925 aa3.08□□□□□ -1.92
SCN3A-203ENST00000409101 USP9YO00507 2555 aaPredicted RBP3.07□□□□□ -1.92
SCN3A-203ENST00000409101 WDR87Q6ZQQ6 2873 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 MTORP42345 2549 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 FP248Q71RG6 208 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 S4R3F8 94 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 RANBP2P49792 3224 aaKnown RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 HRES1P13985 223 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 A0A0D9SG42 100 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 UQCR11O14957 56 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 CENPFP49454 3210 aa3.04□□□□□ -1.92
SCN3A-203ENST00000409101 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
SCN3A-203ENST00000409101 USP24Q9UPU5 2620 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 A8MUN3 132 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 SPRR1AP35321 89 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.93
SCN3A-203ENST00000409101 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.93
SCN3A-203ENST00000409101 HELZ2Q9BYK8 2649 aaKnown RBP3.02□□□□□ -1.93
SCN3A-203ENST00000409101 SPRR1BP22528 89 aa3.02□□□□□ -1.93
SCN3A-203ENST00000409101 C4orf26Q17RF5 130 aa3.01□□□□□ -1.93
SCN3A-203ENST00000409101 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
SCN3A-203ENST00000409101 SETXQ7Z333 2677 aaKnown RBP3□□□□□ -1.93
SCN3A-203ENST00000409101 SETD2Q9BYW2 2564 aaPredicted RBP2.99□□□□□ -1.93
SCN3A-203ENST00000409101 SPINK7P58062 85 aa2.99□□□□□ -1.93
SCN3A-203ENST00000409101 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
SCN3A-203ENST00000409101 GCN1Q92616 2671 aaKnown RBP2.99□□□□□ -1.93
SCN3A-203ENST00000409101 PANO1I0J062 215 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 COL6A3P12111 3177 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 ZNF292O60281 2723 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 KMT2BQ9UMN6 2715 aaPredicted RBP2.98□□□□□ -1.93
SCN3A-203ENST00000409101 Q8NDZ9 215 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms