RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
CASC3-202ENST00000394114 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
CASC3-202ENST00000394114 DYNC2H1Q8NCM8 4307 aaKnown RBP3.88□□□□□ -1.79
CASC3-202ENST00000394114 SMIM29Q86T20 159 aa3.88□□□□□ -1.79
CASC3-202ENST00000394114 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
CASC3-202ENST00000394114 Q8N1X5 172 aa3.88□□□□□ -1.79
CASC3-202ENST00000394114 NKAPP1Q8N9T2 125 aa3.88□□□□□ -1.79
CASC3-202ENST00000394114 DNAH1Q9P2D7 4330 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 KRTAP26-1Q6PEX3 210 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.87□□□□□ -1.79
CASC3-202ENST00000394114 IBA57-AS1B1ANH7 110 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 PSMB2P49721 201 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 CASC10Q5T4H9 136 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
CASC3-202ENST00000394114 LECT2O14960 151 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
CASC3-202ENST00000394114 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 C15orf56Q8N910 161 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
CASC3-202ENST00000394114 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 PRR4Q16378 134 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 LINC00474Q9P2X8 69 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 H0Y9J4 135 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 CXCL5P42830 114 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 C6orf48Q9UBA6 75 aa3.85□□□□□ -1.79
CASC3-202ENST00000394114 A0A087X002 238 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 NUPR2A6NF83 97 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.79
CASC3-202ENST00000394114 LINC00337Q8N6G1 96 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 UPK3BQ9BT76 320 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 XAGE1AQ9HD64 81 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
CASC3-202ENST00000394114 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.8
CASC3-202ENST00000394114 IGKV2D-28P01615 120 aa3.84□□□□□ -1.8
CASC3-202ENST00000394114 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.8
CASC3-202ENST00000394114 COPS9Q8WXC6 57 aa3.84□□□□□ -1.8
CASC3-202ENST00000394114 Q8NDZ9 215 aa3.83□□□□□ -1.8
CASC3-202ENST00000394114 Q8NBF4 154 aa3.83□□□□□ -1.8
CASC3-202ENST00000394114 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
CASC3-202ENST00000394114 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
CASC3-202ENST00000394114 NDUFC2-KCTD14E9PQ53 114 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 M0R2N4 97 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 COX17Q14061 63 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 VPS13DQ5THJ4 4388 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 EPM2AB3EWF7 344 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 M0R378 163 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 NCR3O14931 201 aa3.82□□□□□ -1.8
CASC3-202ENST00000394114 GVQW2A0A096LPI5 108 aaPredicted RBP3.81□□□□□ -1.8
CASC3-202ENST00000394114 PSCAO43653 123 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 ZNF73O43830 326 aaPredicted RBP3.81□□□□□ -1.8
CASC3-202ENST00000394114 SLPIP03973 132 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 SYCNQ0VAF6 134 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 A8MUN3 132 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 RMI2Q96E14 147 aa3.81□□□□□ -1.8
CASC3-202ENST00000394114 TRAV13-2A0A0B4J235 113 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 ATOX1O00244 68 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 HYDINQ4G0P3 5121 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 KMT2CQ8NEZ4 4911 aaKnown RBP3.8□□□□□ -1.8
CASC3-202ENST00000394114 SMIM11BQ8TCY0 68 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.8□□□□□ -1.8
CASC3-202ENST00000394114 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 NBDYA0A0U1RRE5 68 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 COX6CP09669 75 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 LAMTOR3Q9UHA4 124 aa3.8□□□□□ -1.8
CASC3-202ENST00000394114 RYR3Q15413 4870 aa3.79□□□□□ -1.8
CASC3-202ENST00000394114 LST1O00453 97 aa3.79□□□□□ -1.8
CASC3-202ENST00000394114 MUC7Q8TAX7 377 aa3.79□□□□□ -1.8
CASC3-202ENST00000394114 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 SLC25A20O43772 301 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 NDUFS5O43920 106 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 CXCL6P80162 114 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 ATXN8Q156A1 80 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 DNAH2Q9P225 4427 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
CASC3-202ENST00000394114 ZNF706Q9Y5V0 76 aaPredicted RBP3.78□□□□□ -1.8
CASC3-202ENST00000394114 IGLV8-61A0A075B6I0 122 aa3.77□□□□□ -1.81
CASC3-202ENST00000394114 PSPHP1O15172 72 aa3.77□□□□□ -1.81
CASC3-202ENST00000394114 RPL28P46779 137 aaKnown RBP3.77□□□□□ -1.81
CASC3-202ENST00000394114 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
CASC3-202ENST00000394114 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
CASC3-202ENST00000394114 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
CASC3-202ENST00000394114 FAM168BA1KXE4 195 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 KRTAP4-16G5E9R7 235 aaPredicted RBP3.76□□□□□ -1.81
CASC3-202ENST00000394114 LY6G6CO95867 125 aa3.76□□□□□ -1.81
CASC3-202ENST00000394114 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
CASC3-202ENST00000394114 A0A087WYN8 130 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms