RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 A0A087WTM6 91 aa3.7□□□□□ -1.82
GAPVD1-206ENST00000394104 KLKP1Q107X0 134 aa3.7□□□□□ -1.82
GAPVD1-206ENST00000394104 EIF4EBP3O60516 100 aaPredicted RBP3.7□□□□□ -1.82
GAPVD1-206ENST00000394104 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
GAPVD1-206ENST00000394104 HIVEP3Q5T1R4 2406 aa3.69□□□□□ -1.82
GAPVD1-206ENST00000394104 XIRP2A4UGR9 3374 aa3.69□□□□□ -1.82
GAPVD1-206ENST00000394104 PRR26Q8N8Z3 221 aa3.69□□□□□ -1.82
GAPVD1-206ENST00000394104 PSORS1C2Q9UIG4 136 aa3.69□□□□□ -1.82
GAPVD1-206ENST00000394104 K7EIL1 84 aa3.68□□□□□ -1.82
GAPVD1-206ENST00000394104 M0R2T5 61 aa3.68□□□□□ -1.82
GAPVD1-206ENST00000394104 Q1T7F1 81 aa3.68□□□□□ -1.82
GAPVD1-206ENST00000394104 SPG11Q96JI7 2443 aa3.68□□□□□ -1.82
GAPVD1-206ENST00000394104 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
GAPVD1-206ENST00000394104 Q6ZSA8 131 aa3.67□□□□□ -1.82
GAPVD1-206ENST00000394104 SPRR4Q96PI1 79 aa3.67□□□□□ -1.82
GAPVD1-206ENST00000394104 CASC10Q5T4H9 136 aa3.66□□□□□ -1.82
GAPVD1-206ENST00000394104 PLA2G2DQ9UNK4 145 aa3.66□□□□□ -1.82
GAPVD1-206ENST00000394104 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
GAPVD1-206ENST00000394104 PTPN13Q12923 2485 aa3.66□□□□□ -1.82
GAPVD1-206ENST00000394104 WDFY3Q8IZQ1 3526 aa3.65□□□□□ -1.83
GAPVD1-206ENST00000394104 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
GAPVD1-206ENST00000394104 KRTAP10-3P60369 221 aa3.65□□□□□ -1.83
GAPVD1-206ENST00000394104 DNAH14Q0VDD8 3507 aa3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 PRR34Q9NV39 138 aa3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 ANKHD1Q8IWZ3 2542 aaKnown RBP3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 A0A1B0GU33 70 aa3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 A0A1W2PNM2 257 aa3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 DNAH12Q6ZR08 3092 aa3.64□□□□□ -1.83
GAPVD1-206ENST00000394104 C19orf73Q9NVV2 129 aa3.63□□□□□ -1.83
GAPVD1-206ENST00000394104 EYSQ5T1H1 3165 aa3.63□□□□□ -1.83
GAPVD1-206ENST00000394104 S4R3F8 94 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 SZT2Q5T011 3432 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 LINC00612Q8N6U2 182 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 H3BS24 57 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 ABCA2Q9BZC7 2435 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 GIG44P09565 113 aaPredicted RBP3.62□□□□□ -1.83
GAPVD1-206ENST00000394104 CEP350Q5VT06 3117 aa3.61□□□□□ -1.83
GAPVD1-206ENST00000394104 MKI67P46013 3256 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-206ENST00000394104 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
GAPVD1-206ENST00000394104 HRES1P13985 223 aa3.6□□□□□ -1.83
GAPVD1-206ENST00000394104 SONP18583 2426 aaKnown RBP3.6□□□□□ -1.83
GAPVD1-206ENST00000394104 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
GAPVD1-206ENST00000394104 BDP1A6H8Y1 2624 aa3.6□□□□□ -1.83
GAPVD1-206ENST00000394104 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
GAPVD1-206ENST00000394104 ACACBO00763 2458 aa3.59□□□□□ -1.83
GAPVD1-206ENST00000394104 ATRXP46100 2492 aa3.59□□□□□ -1.84
GAPVD1-206ENST00000394104 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-206ENST00000394104 Q75L30 129 aa3.59□□□□□ -1.84
GAPVD1-206ENST00000394104 CSAG1Q6PB30 78 aa3.58□□□□□ -1.84
GAPVD1-206ENST00000394104 SPEGQ15772 3267 aa3.58□□□□□ -1.84
GAPVD1-206ENST00000394104 SPINK7P58062 85 aa3.58□□□□□ -1.84
GAPVD1-206ENST00000394104 DMAC1Q96GE9 116 aa3.58□□□□□ -1.84
GAPVD1-206ENST00000394104 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
GAPVD1-206ENST00000394104 RANBP2P49792 3224 aaKnown RBP3.57□□□□□ -1.84
GAPVD1-206ENST00000394104 TNP2Q05952 138 aa3.57□□□□□ -1.84
GAPVD1-206ENST00000394104 KLK9Q2XQG4 91 aa3.56□□□□□ -1.84
GAPVD1-206ENST00000394104 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
GAPVD1-206ENST00000394104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.55□□□□□ -1.84
GAPVD1-206ENST00000394104 CR1P17927 2039 aa3.55□□□□□ -1.84
GAPVD1-206ENST00000394104 SPTBN5Q9NRC6 3674 aaKnown RBP3.55□□□□□ -1.84
GAPVD1-206ENST00000394104 Q8N9P0 234 aaPredicted RBP3.54□□□□□ -1.84
GAPVD1-206ENST00000394104 UNC80Q8N2C7 3258 aa3.54□□□□□ -1.84
GAPVD1-206ENST00000394104 NCOR2Q9Y618 2525 aa3.54□□□□□ -1.84
GAPVD1-206ENST00000394104 R4GN34 69 aa3.53□□□□□ -1.84
GAPVD1-206ENST00000394104 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
GAPVD1-206ENST00000394104 LRRK2Q5S007 2527 aa3.52□□□□□ -1.85
GAPVD1-206ENST00000394104 C2CD3Q4AC94 2353 aa3.52□□□□□ -1.85
GAPVD1-206ENST00000394104 H1FX-AS1Q4G0G2 97 aa3.52□□□□□ -1.85
GAPVD1-206ENST00000394104 NOTCH2Q04721 2471 aa3.51□□□□□ -1.85
GAPVD1-206ENST00000394104 MMP24-AS1A0A0U1RRL7 71 aa3.51□□□□□ -1.85
GAPVD1-206ENST00000394104 Q5W150 140 aa3.51□□□□□ -1.85
GAPVD1-206ENST00000394104 ROMO1P60602 79 aa3.5□□□□□ -1.85
GAPVD1-206ENST00000394104 Q5XG85 94 aa3.5□□□□□ -1.85
GAPVD1-206ENST00000394104 Q5VV11 94 aa3.5□□□□□ -1.85
GAPVD1-206ENST00000394104 DMDP11532 3685 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 MYO9AB2RTY4 2548 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 IGF2RP11717 2491 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 A0A096LNT2 108 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 PIEZO2Q9H5I5 2752 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 CEP295Q9C0D2 2601 aa3.49□□□□□ -1.85
GAPVD1-206ENST00000394104 NAV2Q8IVL1 2488 aa3.48□□□□□ -1.85
GAPVD1-206ENST00000394104 M0QZ58 72 aa3.48□□□□□ -1.85
GAPVD1-206ENST00000394104 CYSTM1Q9H1C7 97 aa3.47□□□□□ -1.85
GAPVD1-206ENST00000394104 CHD8Q9HCK8 2581 aa3.47□□□□□ -1.85
GAPVD1-206ENST00000394104 FP248Q71RG6 208 aaPredicted RBP3.47□□□□□ -1.85
GAPVD1-206ENST00000394104 REV3LO60673 3130 aa3.46□□□□□ -1.85
GAPVD1-206ENST00000394104 PLAC4Q8WY50 150 aa3.46□□□□□ -1.85
GAPVD1-206ENST00000394104 TLN1Q9Y490 2541 aaKnown RBP3.46□□□□□ -1.85
GAPVD1-206ENST00000394104 BPTFQ12830 3046 aa3.46□□□□□ -1.86
GAPVD1-206ENST00000394104 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
GAPVD1-206ENST00000394104 RPL37P61927 97 aaKnown RBP3.46□□□□□ -1.86
GAPVD1-206ENST00000394104 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
GAPVD1-206ENST00000394104 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
GAPVD1-206ENST00000394104 FN1P02751 2386 aaKnown RBP3.45□□□□□ -1.86
GAPVD1-206ENST00000394104 SEC61BP60468 96 aaKnown RBP3.44□□□□□ -1.86
GAPVD1-206ENST00000394104 CCDC168Q8NDH2 2452 aa3.44□□□□□ -1.86
GAPVD1-206ENST00000394104 KRTAP1-3Q8IUG1 177 aa3.44□□□□□ -1.86
GAPVD1-206ENST00000394104 Q5VSD8 79 aa3.44□□□□□ -1.86
GAPVD1-206ENST00000394104 Q8NDZ9 215 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms