RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 CACFD1Q9UGQ2 172 aa-3.48□□□□□ -2.97
SNORA40.4-201ENST00000390971 NBEAL2Q6ZNJ1 2754 aa-3.49□□□□□ -2.97
SNORA40.4-201ENST00000390971 TRBV25-1A0A075B6N4 114 aa-3.49□□□□□ -2.97
SNORA40.4-201ENST00000390971 PMCHL1Q16048 86 aa-3.49□□□□□ -2.97
SNORA40.4-201ENST00000390971 EYSQ5T1H1 3165 aa-3.5□□□□□ -2.97
SNORA40.4-201ENST00000390971 MON2Q7Z3U7 1717 aa-3.5□□□□□ -2.97
SNORA40.4-201ENST00000390971 PSENENQ9NZ42 101 aa-3.51□□□□□ -2.97
SNORA40.4-201ENST00000390971 SAMD9Q5K651 1589 aa-3.51□□□□□ -2.97
SNORA40.4-201ENST00000390971 C5orf42Q9H799 3197 aa-3.52□□□□□ -2.97
SNORA40.4-201ENST00000390971 SRCAPQ6ZRS2 3230 aa-3.52□□□□□ -2.97
SNORA40.4-201ENST00000390971 PZPP20742 1482 aa-3.53□□□□□ -2.97
SNORA40.4-201ENST00000390971 CORTO00230 105 aa-3.53□□□□□ -2.97
SNORA40.4-201ENST00000390971 C5P01031 1676 aa-3.53□□□□□ -2.97
SNORA40.4-201ENST00000390971 H0YAA0 97 aa-3.54□□□□□ -2.98
SNORA40.4-201ENST00000390971 NDUFC1O43677 76 aa-3.54□□□□□ -2.98
SNORA40.4-201ENST00000390971 EIF4G3O43432 1585 aaKnown RBP-3.55□□□□□ -2.98
SNORA40.4-201ENST00000390971 C9orf92A6NGG3 77 aa-3.57□□□□□ -2.98
SNORA40.4-201ENST00000390971 DLEU1O43261 78 aa-3.57□□□□□ -2.98
SNORA40.4-201ENST00000390971 RGPD2P0DJD1 1756 aa-3.57□□□□□ -2.98
SNORA40.4-201ENST00000390971 AP4S1Q9Y587 144 aa-3.57□□□□□ -2.98
SNORA40.4-201ENST00000390971 CSMD1Q96PZ7 3565 aa-3.57□□□□□ -2.98
SNORA40.4-201ENST00000390971 MLH3Q9UHC1 1453 aa-3.58□□□□□ -2.98
SNORA40.4-201ENST00000390971 S100A1P23297 94 aa-3.58□□□□□ -2.98
SNORA40.4-201ENST00000390971 NMSQ5H8A3 153 aa-3.58□□□□□ -2.98
SNORA40.4-201ENST00000390971 ABCC5O15440 1437 aa-3.59□□□□□ -2.98
SNORA40.4-201ENST00000390971 MT1XP80297 61 aa-3.59□□□□□ -2.98
SNORA40.4-201ENST00000390971 ABCC2Q92887 1545 aa-3.6□□□□□ -2.98
SNORA40.4-201ENST00000390971 CFAP46Q8IYW2 2715 aa-3.6□□□□□ -2.99
SNORA40.4-201ENST00000390971 KIF20BQ96Q89 1820 aa-3.61□□□□□ -2.99
SNORA40.4-201ENST00000390971 UQCRHP07919 91 aa-3.62□□□□□ -2.99
SNORA40.4-201ENST00000390971 MT1HL1P0DM35 61 aa-3.62□□□□□ -2.99
SNORA40.4-201ENST00000390971 ABCA3Q99758 1704 aa-3.63□□□□□ -2.99
SNORA40.4-201ENST00000390971 DEFB1P60022 68 aa-3.63□□□□□ -2.99
SNORA40.4-201ENST00000390971 ANKRD50Q9ULJ7 1429 aa-3.63□□□□□ -2.99
SNORA40.4-201ENST00000390971 A0A1B0GV90 55 aa-3.64□□□□□ -2.99
SNORA40.4-201ENST00000390971 MPC2O95563 127 aa-3.64□□□□□ -2.99
SNORA40.4-201ENST00000390971 TRGV9Q99603 122 aa-3.65□□□□□ -2.99
SNORA40.4-201ENST00000390971 H7BZZ5 65 aa-3.66□□□□□ -3
SNORA40.4-201ENST00000390971 GTF2H5Q6ZYL4 71 aa-3.66□□□□□ -3
SNORA40.4-201ENST00000390971 PREX1Q8TCU6 1659 aa-3.66□□□□□ -3
SNORA40.4-201ENST00000390971 SMG1Q96Q15 3661 aaKnown RBP-3.66□□□□□ -3
SNORA40.4-201ENST00000390971 RAPGEF2Q9Y4G8 1499 aa-3.67□□□□□ -3
SNORA40.4-201ENST00000390971 FAM186AA6NE01 2351 aa-3.67□□□□□ -3
SNORA40.4-201ENST00000390971 COX6B2Q6YFQ2 88 aa-3.68□□□□□ -3
SNORA40.4-201ENST00000390971 EFCAB10A6NFE3 127 aa-3.69□□□□□ -3
SNORA40.4-201ENST00000390971 DNAH8Q96JB1 4490 aa-3.69□□□□□ -3
SNORA40.4-201ENST00000390971 IGLC2P0DOY2 106 aa-3.7□□□□□ -3
SNORA40.4-201ENST00000390971 IGLC3P0DOY3 106 aa-3.7□□□□□ -3
SNORA40.4-201ENST00000390971 ITPR2Q14571 2701 aa-3.71□□□□□ -3
SNORA40.4-201ENST00000390971 GNGT2O14610 69 aa-3.71□□□□□ -3
SNORA40.4-201ENST00000390971 GNG8Q9UK08 70 aa-3.71□□□□□ -3
SNORA40.4-201ENST00000390971 PRDM15P57071 1507 aaPredicted RBP-3.71□□□□□ -3
SNORA40.4-201ENST00000390971 FAM135AQ9P2D6 1515 aa-3.71□□□□□ -3
SNORA40.4-201ENST00000390971 MAGI2Q86UL8 1455 aa-3.72□□□□□ -3
SNORA40.4-201ENST00000390971 CEP290O15078 2479 aa-3.72□□□□□ -3
SNORA40.4-201ENST00000390971 TMEM218A2RU14 115 aa-3.72□□□□□ -3
SNORA40.4-201ENST00000390971 MRPS10P82664 201 aaKnown RBP-3.72□□□□□ -3
SNORA40.4-201ENST00000390971 QSER1Q2KHR3 1735 aa-3.73□□□□□ -3.01
SNORA40.4-201ENST00000390971 K7EP34 96 aa-3.73□□□□□ -3.01
SNORA40.4-201ENST00000390971 ACACBO00763 2458 aa-3.75□□□□□ -3.01
SNORA40.4-201ENST00000390971 HMGN3Q15651 99 aa-3.75□□□□□ -3.01
SNORA40.4-201ENST00000390971 RANBP2P49792 3224 aaKnown RBP-3.76□□□□□ -3.01
SNORA40.4-201ENST00000390971 ALKAL2Q6UX46 152 aa-3.76□□□□□ -3.01
SNORA40.4-201ENST00000390971 LRBAP50851 2863 aa-3.76□□□□□ -3.01
SNORA40.4-201ENST00000390971 C4AP0C0L4 1744 aa-3.76□□□□□ -3.01
SNORA40.4-201ENST00000390971 C4BP0C0L5 1744 aa-3.76□□□□□ -3.01
SNORA40.4-201ENST00000390971 MYO9AB2RTY4 2548 aa-3.77□□□□□ -3.01
SNORA40.4-201ENST00000390971 NRXN1Q9ULB1 1477 aa-3.77□□□□□ -3.01
SNORA40.4-201ENST00000390971 NDUFA3O95167 84 aa-3.77□□□□□ -3.01
SNORA40.4-201ENST00000390971 KRTAP19-5Q3LI72 72 aa-3.77□□□□□ -3.01
SNORA40.4-201ENST00000390971 TMEM203Q969S6 136 aa-3.77□□□□□ -3.01
SNORA40.4-201ENST00000390971 D6R8Y8 96 aa-3.79□□□□□ -3.02
SNORA40.4-201ENST00000390971 MUSTN1Q8IVN3 82 aa-3.79□□□□□ -3.02
SNORA40.4-201ENST00000390971 RGPD8O14715 1765 aaPredicted RBP-3.8□□□□□ -3.02
SNORA40.4-201ENST00000390971 RGPD5Q99666 1765 aa-3.8□□□□□ -3.02
SNORA40.4-201ENST00000390971 COX7BP24311 80 aa-3.8□□□□□ -3.02
SNORA40.4-201ENST00000390971 ETDBQ3ZM63 59 aa-3.8□□□□□ -3.02
SNORA40.4-201ENST00000390971 CRYBG1Q9Y4K1 1723 aa-3.81□□□□□ -3.02
SNORA40.4-201ENST00000390971 UBR3Q6ZT12 1888 aa-3.81□□□□□ -3.02
SNORA40.4-201ENST00000390971 PMCHL2Q9BQD1 86 aa-3.82□□□□□ -3.02
SNORA40.4-201ENST00000390971 PKD1L3Q7Z443 1732 aa-3.82□□□□□ -3.02
SNORA40.4-201ENST00000390971 LEPROTL1O95214 131 aa-3.83□□□□□ -3.02
SNORA40.4-201ENST00000390971 RPL38P63173 70 aaKnown RBP-3.83□□□□□ -3.02
SNORA40.4-201ENST00000390971 C2orf88Q9BSF0 95 aa-3.83□□□□□ -3.02
SNORA40.4-201ENST00000390971 LRRC9Q6ZRR7 1453 aa-3.84□□□□□ -3.02
SNORA40.4-201ENST00000390971 ATOX1O00244 68 aa-3.84□□□□□ -3.02
SNORA40.4-201ENST00000390971 KRTAP20-1Q3LI63 56 aa-3.84□□□□□ -3.02
SNORA40.4-201ENST00000390971 SERP2Q8N6R1 65 aa-3.84□□□□□ -3.02
SNORA40.4-201ENST00000390971 ZNF720Q7Z2F6 126 aa-3.85□□□□□ -3.03
SNORA40.4-201ENST00000390971 BPTFQ12830 3046 aa-3.85□□□□□ -3.03
SNORA40.4-201ENST00000390971 DMXL2Q8TDJ6 3036 aa-3.87□□□□□ -3.03
SNORA40.4-201ENST00000390971 ANKRD36BQ8N2N9 1353 aa-3.88□□□□□ -3.03
SNORA40.4-201ENST00000390971 TRRAPQ9Y4A5 3859 aa-3.88□□□□□ -3.03
SNORA40.4-201ENST00000390971 ZFYVE16Q7Z3T8 1539 aa-3.9□□□□□ -3.03
SNORA40.4-201ENST00000390971 F8WEM9 126 aa-3.9□□□□□ -3.03
SNORA40.4-201ENST00000390971 DEFB110Q30KQ9 67 aa-3.9□□□□□ -3.03
SNORA40.4-201ENST00000390971 UBE2D4Q9Y2X8 147 aa-3.9□□□□□ -3.03
SNORA40.4-201ENST00000390971 ALKQ9UM73 1620 aa-3.91□□□□□ -3.03
SNORA40.4-201ENST00000390971 MT1GP13640 62 aa-3.91□□□□□ -3.04
SNORA40.4-201ENST00000390971 DNAH5Q8TE73 4624 aa-3.91□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms