RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CHTF8P0CG12 524 aa5.62□□□□□ -1.51
PCDH9-202ENST00000377865 LY6G6CO95867 125 aa5.61□□□□□ -1.51
PCDH9-202ENST00000377865 SPRR1AP35321 89 aa5.6□□□□□ -1.51
PCDH9-202ENST00000377865 RTL8CO15255 209 aa5.6□□□□□ -1.51
PCDH9-202ENST00000377865 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
PCDH9-202ENST00000377865 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
PCDH9-202ENST00000377865 BDP1A6H8Y1 2624 aa5.59□□□□□ -1.51
PCDH9-202ENST00000377865 KRTAP24-1Q3LI83 254 aa5.59□□□□□ -1.51
PCDH9-202ENST00000377865 Q75L30 129 aa5.59□□□□□ -1.51
PCDH9-202ENST00000377865 PTPN13Q12923 2485 aa5.58□□□□□ -1.52
PCDH9-202ENST00000377865 ANKRD11Q6UB99 2663 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-202ENST00000377865 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
PCDH9-202ENST00000377865 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
PCDH9-202ENST00000377865 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
PCDH9-202ENST00000377865 SPINK1P00995 79 aa5.58□□□□□ -1.52
PCDH9-202ENST00000377865 LCA10Q71F78 164 aa5.57□□□□□ -1.52
PCDH9-202ENST00000377865 ANKRD17O75179 2603 aaKnown RBP5.56□□□□□ -1.52
PCDH9-202ENST00000377865 IGLV8-61A0A075B6I0 122 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 C9orf163Q8N9P6 203 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 CR1P17927 2039 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 UQCR11O14957 56 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 ABCA2Q9BZC7 2435 aa5.56□□□□□ -1.52
PCDH9-202ENST00000377865 DOPEY1Q5JWR5 2465 aa5.54□□□□□ -1.52
PCDH9-202ENST00000377865 NCOR2Q9Y618 2525 aa5.54□□□□□ -1.52
PCDH9-202ENST00000377865 MKI67P46013 3256 aaKnown RBP5.54□□□□□ -1.52
PCDH9-202ENST00000377865 ZNF861PO60384 105 aa5.54□□□□□ -1.52
PCDH9-202ENST00000377865 SSBP3-AS1Q7Z2R9 100 aa5.53□□□□□ -1.52
PCDH9-202ENST00000377865 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
PCDH9-202ENST00000377865 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
PCDH9-202ENST00000377865 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
PCDH9-202ENST00000377865 MYO9AB2RTY4 2548 aa5.52□□□□□ -1.53
PCDH9-202ENST00000377865 BRCA2P51587 3418 aa5.52□□□□□ -1.53
PCDH9-202ENST00000377865 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
PCDH9-202ENST00000377865 TNP2Q05952 138 aa5.52□□□□□ -1.53
PCDH9-202ENST00000377865 SONP18583 2426 aaKnown RBP5.51□□□□□ -1.53
PCDH9-202ENST00000377865 CEP295Q9C0D2 2601 aa5.51□□□□□ -1.53
PCDH9-202ENST00000377865 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
PCDH9-202ENST00000377865 SPRR1BP22528 89 aa5.51□□□□□ -1.53
PCDH9-202ENST00000377865 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
PCDH9-202ENST00000377865 Q5VV11 94 aa5.5□□□□□ -1.53
PCDH9-202ENST00000377865 K7EIL1 84 aa5.5□□□□□ -1.53
PCDH9-202ENST00000377865 CACNA1AO00555 2505 aa5.49□□□□□ -1.53
PCDH9-202ENST00000377865 USP9XQ93008 2570 aaPredicted RBP5.48□□□□□ -1.53
PCDH9-202ENST00000377865 FN1P02751 2386 aaKnown RBP5.48□□□□□ -1.53
PCDH9-202ENST00000377865 APLNQ9ULZ1 77 aa5.48□□□□□ -1.53
PCDH9-202ENST00000377865 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
PCDH9-202ENST00000377865 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
PCDH9-202ENST00000377865 CCDC168Q8NDH2 2452 aa5.47□□□□□ -1.53
PCDH9-202ENST00000377865 Q96NJ1 140 aa5.46□□□□□ -1.53
PCDH9-202ENST00000377865 A0A087WTM6 91 aa5.46□□□□□ -1.54
PCDH9-202ENST00000377865 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
PCDH9-202ENST00000377865 KRTAP4-16G5E9R7 235 aaPredicted RBP5.46□□□□□ -1.54
PCDH9-202ENST00000377865 LCE6AA0A183 80 aa5.45□□□□□ -1.54
PCDH9-202ENST00000377865 IGLV7-43P04211 117 aa5.45□□□□□ -1.54
PCDH9-202ENST00000377865 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
PCDH9-202ENST00000377865 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
PCDH9-202ENST00000377865 TLN2Q9Y4G6 2542 aa5.44□□□□□ -1.54
PCDH9-202ENST00000377865 PRRC2CQ9Y520 2896 aaKnown RBP5.44□□□□□ -1.54
PCDH9-202ENST00000377865 USP9YO00507 2555 aaPredicted RBP5.43□□□□□ -1.54
PCDH9-202ENST00000377865 ABCA12Q86UK0 2595 aa5.41□□□□□ -1.54
PCDH9-202ENST00000377865 HRES1P13985 223 aa5.41□□□□□ -1.54
PCDH9-202ENST00000377865 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
PCDH9-202ENST00000377865 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
PCDH9-202ENST00000377865 LRRK2Q5S007 2527 aa5.39□□□□□ -1.55
PCDH9-202ENST00000377865 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
PCDH9-202ENST00000377865 ZNF462Q96JM2 2506 aa5.39□□□□□ -1.55
PCDH9-202ENST00000377865 Q6ZR54 194 aa5.37□□□□□ -1.55
PCDH9-202ENST00000377865 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
PCDH9-202ENST00000377865 PKD1L2Q7Z442 2459 aa5.36□□□□□ -1.55
PCDH9-202ENST00000377865 MYO18BQ8IUG5 2567 aa5.36□□□□□ -1.55
PCDH9-202ENST00000377865 PIEZO1Q92508 2521 aa5.35□□□□□ -1.55
PCDH9-202ENST00000377865 LINC00483Q53H64 154 aa5.35□□□□□ -1.55
PCDH9-202ENST00000377865 DNAH14Q0VDD8 3507 aa5.35□□□□□ -1.55
PCDH9-202ENST00000377865 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
PCDH9-202ENST00000377865 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-202ENST00000377865 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
PCDH9-202ENST00000377865 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
PCDH9-202ENST00000377865 SPINK7P58062 85 aa5.33□□□□□ -1.56
PCDH9-202ENST00000377865 POLQO75417 2590 aa5.33□□□□□ -1.56
PCDH9-202ENST00000377865 CDH23Q9H251 3354 aa5.32□□□□□ -1.56
PCDH9-202ENST00000377865 RANBP2P49792 3224 aaKnown RBP5.32□□□□□ -1.56
PCDH9-202ENST00000377865 LAMA2P24043 3122 aaKnown RBP5.31□□□□□ -1.56
PCDH9-202ENST00000377865 Q5W150 140 aa5.31□□□□□ -1.56
PCDH9-202ENST00000377865 LAMA3Q16787 3333 aa5.3□□□□□ -1.56
PCDH9-202ENST00000377865 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
PCDH9-202ENST00000377865 CHD8Q9HCK8 2581 aa5.3□□□□□ -1.56
PCDH9-202ENST00000377865 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
PCDH9-202ENST00000377865 DMAC1Q96GE9 116 aa5.29□□□□□ -1.56
PCDH9-202ENST00000377865 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
PCDH9-202ENST00000377865 UNC80Q8N2C7 3258 aa5.29□□□□□ -1.56
PCDH9-202ENST00000377865 WWC2-AS2Q96NR7 200 aa5.29□□□□□ -1.56
PCDH9-202ENST00000377865 JMJD1CQ15652 2540 aa5.29□□□□□ -1.56
PCDH9-202ENST00000377865 SPTBN4Q9H254 2564 aa5.28□□□□□ -1.56
PCDH9-202ENST00000377865 NOTCH2Q04721 2471 aa5.27□□□□□ -1.57
PCDH9-202ENST00000377865 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
PCDH9-202ENST00000377865 Q8N1X5 172 aa5.27□□□□□ -1.57
PCDH9-202ENST00000377865 TRIOO75962 3097 aa5.27□□□□□ -1.57
PCDH9-202ENST00000377865 SETD2Q9BYW2 2564 aaPredicted RBP5.26□□□□□ -1.57
PCDH9-202ENST00000377865 A6NN06 94 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms