RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
BRCC3-204ENST00000369462 XGP55808 180 aa6.83□□□□□ -1.32
BRCC3-204ENST00000369462 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
BRCC3-204ENST00000369462 SMIM11BQ8TCY0 68 aa6.83□□□□□ -1.32
BRCC3-204ENST00000369462 TRAV23DV6A0A075B6W5 121 aa6.83□□□□□ -1.32
BRCC3-204ENST00000369462 TSPAN13O95857 204 aa6.82□□□□□ -1.32
BRCC3-204ENST00000369462 KCNQ1DNQ9H478 68 aa6.82□□□□□ -1.32
BRCC3-204ENST00000369462 NAA38Q9BRA0 125 aaKnown RBP6.82□□□□□ -1.32
BRCC3-204ENST00000369462 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
BRCC3-204ENST00000369462 TAX1BP3O14907 124 aa6.81□□□□□ -1.32
BRCC3-204ENST00000369462 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
BRCC3-204ENST00000369462 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
BRCC3-204ENST00000369462 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
BRCC3-204ENST00000369462 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
BRCC3-204ENST00000369462 PSMB2P49721 201 aa6.8□□□□□ -1.32
BRCC3-204ENST00000369462 CBY1Q9Y3M2 126 aa6.8□□□□□ -1.32
BRCC3-204ENST00000369462 PRYO14603 147 aa6.8□□□□□ -1.32
BRCC3-204ENST00000369462 REG3GQ6UW15 175 aa6.8□□□□□ -1.32
BRCC3-204ENST00000369462 H3BUT2 72 aa6.79□□□□□ -1.32
BRCC3-204ENST00000369462 TRIAP1O43715 76 aa6.79□□□□□ -1.32
BRCC3-204ENST00000369462 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
BRCC3-204ENST00000369462 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
BRCC3-204ENST00000369462 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-204ENST00000369462 C9orf118A6NHY6 69 aa6.77□□□□□ -1.32
BRCC3-204ENST00000369462 SPRR1AP35321 89 aa6.77□□□□□ -1.32
BRCC3-204ENST00000369462 ETDCA0A1B0GVM5 59 aa6.77□□□□□ -1.33
BRCC3-204ENST00000369462 SCGB1C2P0DMR2 95 aa6.77□□□□□ -1.33
BRCC3-204ENST00000369462 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-204ENST00000369462 COX6CP09669 75 aa6.76□□□□□ -1.33
BRCC3-204ENST00000369462 VAMP3Q15836 100 aa6.76□□□□□ -1.33
BRCC3-204ENST00000369462 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
BRCC3-204ENST00000369462 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
BRCC3-204ENST00000369462 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
BRCC3-204ENST00000369462 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
BRCC3-204ENST00000369462 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
BRCC3-204ENST00000369462 BCE1O60756 84 aa6.75□□□□□ -1.33
BRCC3-204ENST00000369462 COX7BP24311 80 aa6.75□□□□□ -1.33
BRCC3-204ENST00000369462 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
BRCC3-204ENST00000369462 FAT1Q14517 4588 aa6.74□□□□□ -1.33
BRCC3-204ENST00000369462 PRLHP81277 87 aa6.74□□□□□ -1.33
BRCC3-204ENST00000369462 B5MCH6 92 aa6.74□□□□□ -1.33
BRCC3-204ENST00000369462 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
BRCC3-204ENST00000369462 TRBV7-6A0A0J9YX20 115 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 A0A1W2PPM0 123 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 Q6ZRX8 168 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 CLEC2BQ92478 149 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 H0YGX0 51 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 UBE2AP49459 152 aa6.73□□□□□ -1.33
BRCC3-204ENST00000369462 HSPG2P98160 4391 aa6.72□□□□□ -1.33
BRCC3-204ENST00000369462 RYR1P21817 5038 aa6.72□□□□□ -1.33
BRCC3-204ENST00000369462 FABP2P12104 132 aa6.72□□□□□ -1.33
BRCC3-204ENST00000369462 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
BRCC3-204ENST00000369462 Q9BRP9 147 aa6.71□□□□□ -1.34
BRCC3-204ENST00000369462 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.34
BRCC3-204ENST00000369462 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.34
BRCC3-204ENST00000369462 LINC00575Q6W349 94 aa6.71□□□□□ -1.34
BRCC3-204ENST00000369462 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
BRCC3-204ENST00000369462 IGLV7-43P04211 117 aa6.7□□□□□ -1.34
BRCC3-204ENST00000369462 UBE2V1Q13404 147 aa6.7□□□□□ -1.34
BRCC3-204ENST00000369462 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
BRCC3-204ENST00000369462 H0Y9J4 135 aa6.69□□□□□ -1.34
BRCC3-204ENST00000369462 SLC25A20O43772 301 aa6.69□□□□□ -1.34
BRCC3-204ENST00000369462 TCL1BO95988 128 aa6.69□□□□□ -1.34
BRCC3-204ENST00000369462 ZNF861PO60384 105 aa6.69□□□□□ -1.34
BRCC3-204ENST00000369462 SMCR5Q8TEV8 140 aa6.69□□□□□ -1.34
BRCC3-204ENST00000369462 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 DHRS4-AS1Q9P1J3 65 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 ERC2-IT1O76042 136 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 SPCS1Q9Y6A9 102 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 TRBV20-1A0A075B6N2 111 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 LST1O00453 97 aa6.68□□□□□ -1.34
BRCC3-204ENST00000369462 SNCGO76070 127 aa6.67□□□□□ -1.34
BRCC3-204ENST00000369462 ATXN8Q156A1 80 aa6.67□□□□□ -1.34
BRCC3-204ENST00000369462 A0A1B0GV90 55 aa6.66□□□□□ -1.34
BRCC3-204ENST00000369462 A0A1B0GX51 115 aa6.65□□□□□ -1.34
BRCC3-204ENST00000369462 H3BMG7 143 aa6.65□□□□□ -1.34
BRCC3-204ENST00000369462 DNAL4O96015 105 aa6.65□□□□□ -1.34
BRCC3-204ENST00000369462 Q6ZQY7 126 aa6.65□□□□□ -1.34
BRCC3-204ENST00000369462 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.35
BRCC3-204ENST00000369462 Q5VSD8 79 aa6.65□□□□□ -1.35
BRCC3-204ENST00000369462 TRACP01848 142 aa6.64□□□□□ -1.35
BRCC3-204ENST00000369462 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
BRCC3-204ENST00000369462 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
BRCC3-204ENST00000369462 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
BRCC3-204ENST00000369462 BIRC6Q9NR09 4857 aa6.64□□□□□ -1.35
BRCC3-204ENST00000369462 K7EP34 96 aa6.63□□□□□ -1.35
BRCC3-204ENST00000369462 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
BRCC3-204ENST00000369462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-204ENST00000369462 Q8N1X5 172 aa6.63□□□□□ -1.35
BRCC3-204ENST00000369462 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
BRCC3-204ENST00000369462 C9JAW5 83 aa6.61□□□□□ -1.35
BRCC3-204ENST00000369462 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
BRCC3-204ENST00000369462 SEC61GP60059 68 aa6.6□□□□□ -1.35
BRCC3-204ENST00000369462 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
BRCC3-204ENST00000369462 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
BRCC3-204ENST00000369462 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
BRCC3-204ENST00000369462 LINC01547P58512 204 aaPredicted RBP6.59□□□□□ -1.35
BRCC3-204ENST00000369462 SPRR4Q96PI1 79 aa6.59□□□□□ -1.35
BRCC3-204ENST00000369462 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms