RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SPRR4Q96PI1 79 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 PRLHP81277 87 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 LYPD2Q6UXB3 125 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 PTPRSQ13332 1948 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 TMEM105Q8N8V8 129 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
SYNE2-202ENST00000344113 UNC79Q9P2D8 2635 aa2.55□□□□□ -2
SYNE2-202ENST00000344113 TFF2Q03403 129 aa2.55□□□□□ -2
SYNE2-202ENST00000344113 NOTCH1P46531 2555 aa2.55□□□□□ -2
SYNE2-202ENST00000344113 CHD9Q3L8U1 2897 aa2.55□□□□□ -2
SYNE2-202ENST00000344113 MAP1AP78559 2803 aaPredicted RBP2.55□□□□□ -2
SYNE2-202ENST00000344113 COL5A1P20908 1838 aaPredicted RBP2.55□□□□□ -2
SYNE2-202ENST00000344113 RNF223E7ERA6 249 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 CEP295Q9C0D2 2601 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 DEFB124Q8NES8 71 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 MGAQ8IWI9 3026 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 LINC01006Q8NI28 216 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 SPINK1P00995 79 aa2.54□□□□□ -2
SYNE2-202ENST00000344113 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 IGKV2D-28P01615 120 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 H3BNG1 76 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 LMO4P61968 165 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 PRR9Q5T870 116 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 UBR5O95071 2799 aaPredicted RBP2.53□□□□□ -2
SYNE2-202ENST00000344113 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 C15orf56Q8N910 161 aa2.53□□□□□ -2
SYNE2-202ENST00000344113 C11orf21Q9P2W6 132 aa2.53□□□□□ -2.01
SYNE2-202ENST00000344113 LYNX1G3V0Z9 82 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 ADGRG4Q8IZF6 3080 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 BRD3OSQ6XYD6 125 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 HTTP42858 3142 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 UNQ6190/PRO20217Q6UXQ8 127 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 C9orf129Q5T035 196 aaKnown RBP2.52□□□□□ -2.01
SYNE2-202ENST00000344113 LINC00476Q8WZB0 136 aa2.52□□□□□ -2.01
SYNE2-202ENST00000344113 GOLGB1Q14789 3259 aaKnown RBP2.51□□□□□ -2.01
SYNE2-202ENST00000344113 F8W735 103 aaPredicted RBP2.51□□□□□ -2.01
SYNE2-202ENST00000344113 COX6A2Q02221 97 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 DEFB1P60022 68 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 C18orf65Q6ZTR6 163 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 IGSF10Q6WRI0 2623 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 A0A096LPF7 62 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 CFAP46Q8IYW2 2715 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 PLA2G2DQ9UNK4 145 aa2.51□□□□□ -2.01
SYNE2-202ENST00000344113 ASH1LQ9NR48 2969 aaKnown RBP2.51□□□□□ -2.01
SYNE2-202ENST00000344113 A0A1B0GVX0 72 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 PRR34Q9NV39 138 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 COL6A5A8TX70 2615 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 K7EQZ3 153 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 DMXL2Q8TDJ6 3036 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 LY6G6CO95867 125 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 C1orf229Q6ZS94 237 aaPredicted RBP2.5□□□□□ -2.01
SYNE2-202ENST00000344113 GCN1Q92616 2671 aaKnown RBP2.5□□□□□ -2.01
SYNE2-202ENST00000344113 IGKV2D-30A0A075B6S6 120 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 IGKV2-30P06310 120 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 DMXL1Q9Y485 3027 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 COL6A3P12111 3177 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 A0A1B0GU33 70 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 ROMO1P60602 79 aa2.5□□□□□ -2.01
SYNE2-202ENST00000344113 LINC00528Q8N1L1 170 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 LINC01556Q5JQF7 62 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 DEFB113Q30KQ7 82 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 SLURP1P55000 103 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 PROK1P58294 105 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 CASC10Q5T4H9 136 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 LAMA1P25391 3075 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 SPINK6Q6UWN8 80 aa2.49□□□□□ -2.01
SYNE2-202ENST00000344113 NSD1Q96L73 2696 aaPredicted RBP2.48□□□□□ -2.01
SYNE2-202ENST00000344113 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 CRYBG3Q68DQ2 2970 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 CIRBP-AS1Q8TBR5 109 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 ODF3L2Q3SX64 289 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 IGLV1-40P01703 118 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 PCNTO95613 3336 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 RTL8CO15255 209 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 PLAC8Q9NZF1 115 aa2.48□□□□□ -2.01
SYNE2-202ENST00000344113 SPINK7P58062 85 aa2.47□□□□□ -2.01
SYNE2-202ENST00000344113 APLNQ9ULZ1 77 aa2.47□□□□□ -2.01
SYNE2-202ENST00000344113 FRYQ5TBA9 3013 aa2.47□□□□□ -2.01
SYNE2-202ENST00000344113 A0A096LNI7 61 aa2.47□□□□□ -2.01
SYNE2-202ENST00000344113 NBEAQ8NFP9 2946 aa2.46□□□□□ -2.02
SYNE2-202ENST00000344113 COL12A1Q99715 3063 aa2.46□□□□□ -2.02
SYNE2-202ENST00000344113 TNRC18O15417 2968 aaPredicted RBP2.46□□□□□ -2.02
SYNE2-202ENST00000344113 DEFB135Q30KP9 77 aa2.46□□□□□ -2.02
SYNE2-202ENST00000344113 EP400Q96L91 3159 aa2.45□□□□□ -2.02
SYNE2-202ENST00000344113 Q6ZR54 194 aa2.45□□□□□ -2.02
SYNE2-202ENST00000344113 BOD1L1Q8NFC6 3051 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 VPS13AQ96RL7 3174 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 DEFB123Q8N688 67 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 CFAP47Q6ZTR5 3102 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 DNAH10OSP0CZ25 163 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
SYNE2-202ENST00000344113 A8MU10 97 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms