RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 TNP2Q05952 138 aa4.21□□□□□ -1.74
CPEB4-202ENST00000334035 H3BS24 57 aa4.21□□□□□ -1.74
CPEB4-202ENST00000334035 WWC2-AS2Q96NR7 200 aa4.21□□□□□ -1.74
CPEB4-202ENST00000334035 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
CPEB4-202ENST00000334035 DMAC1Q96GE9 116 aa4.19□□□□□ -1.74
CPEB4-202ENST00000334035 APLNQ9ULZ1 77 aa4.19□□□□□ -1.74
CPEB4-202ENST00000334035 Q8NDZ9 215 aa4.19□□□□□ -1.74
CPEB4-202ENST00000334035 FAM208BQ5VWN6 2430 aa4.19□□□□□ -1.74
CPEB4-202ENST00000334035 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
CPEB4-202ENST00000334035 IGLV7-43P04211 117 aa4.18□□□□□ -1.74
CPEB4-202ENST00000334035 Q6ZR54 194 aa4.18□□□□□ -1.74
CPEB4-202ENST00000334035 SORL1Q92673 2214 aa4.18□□□□□ -1.74
CPEB4-202ENST00000334035 A6NN06 94 aa4.17□□□□□ -1.74
CPEB4-202ENST00000334035 SPINK7P58062 85 aa4.16□□□□□ -1.74
CPEB4-202ENST00000334035 KRTAP29-1A8MX34 341 aaPredicted RBP4.16□□□□□ -1.74
CPEB4-202ENST00000334035 KRTAP10-11P60412 298 aa4.16□□□□□ -1.74
CPEB4-202ENST00000334035 A0A1B0GU33 70 aa4.15□□□□□ -1.74
CPEB4-202ENST00000334035 KRTAP10-3P60369 221 aa4.15□□□□□ -1.74
CPEB4-202ENST00000334035 PLA2G1BP04054 148 aaKnown RBP4.15□□□□□ -1.75
CPEB4-202ENST00000334035 WNK1Q9H4A3 2382 aa4.14□□□□□ -1.75
CPEB4-202ENST00000334035 NBASA2RRP1 2371 aa4.14□□□□□ -1.75
CPEB4-202ENST00000334035 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
CPEB4-202ENST00000334035 A0A087WTM6 91 aa4.14□□□□□ -1.75
CPEB4-202ENST00000334035 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
CPEB4-202ENST00000334035 PSORS1C2Q9UIG4 136 aa4.13□□□□□ -1.75
CPEB4-202ENST00000334035 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
CPEB4-202ENST00000334035 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
CPEB4-202ENST00000334035 KRTAP26-1Q6PEX3 210 aa4.12□□□□□ -1.75
CPEB4-202ENST00000334035 Q8N1X5 172 aa4.12□□□□□ -1.75
CPEB4-202ENST00000334035 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
CPEB4-202ENST00000334035 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
CPEB4-202ENST00000334035 ANAPC11Q9NYG5 84 aa4.11□□□□□ -1.75
CPEB4-202ENST00000334035 C2CD3Q4AC94 2353 aa4.11□□□□□ -1.75
CPEB4-202ENST00000334035 CUL9Q8IWT3 2517 aa4.11□□□□□ -1.75
CPEB4-202ENST00000334035 Q5W150 140 aa4.1□□□□□ -1.75
CPEB4-202ENST00000334035 CSPG4Q6UVK1 2322 aa4.1□□□□□ -1.75
CPEB4-202ENST00000334035 NAV2Q8IVL1 2488 aa4.1□□□□□ -1.75
CPEB4-202ENST00000334035 LINC00483Q53H64 154 aa4.1□□□□□ -1.75
CPEB4-202ENST00000334035 C9orf92A6NGG3 77 aa4.1□□□□□ -1.75
CPEB4-202ENST00000334035 KRTAP1-3Q8IUG1 177 aa4.09□□□□□ -1.75
CPEB4-202ENST00000334035 A0A0D9SG42 100 aa4.08□□□□□ -1.76
CPEB4-202ENST00000334035 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
CPEB4-202ENST00000334035 K7EIL1 84 aa4.07□□□□□ -1.76
CPEB4-202ENST00000334035 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
CPEB4-202ENST00000334035 PTPN13Q12923 2485 aa4.07□□□□□ -1.76
CPEB4-202ENST00000334035 PLAC8Q9NZF1 115 aa4.07□□□□□ -1.76
CPEB4-202ENST00000334035 KRTAP1-1Q07627 177 aa4.06□□□□□ -1.76
CPEB4-202ENST00000334035 ATRXP46100 2492 aa4.05□□□□□ -1.76
CPEB4-202ENST00000334035 NOTCH2Q04721 2471 aa4.05□□□□□ -1.76
CPEB4-202ENST00000334035 ROMO1P60602 79 aa4.05□□□□□ -1.76
CPEB4-202ENST00000334035 ACACBO00763 2458 aa4.05□□□□□ -1.76
CPEB4-202ENST00000334035 TTC28Q96AY4 2481 aa4.04□□□□□ -1.76
CPEB4-202ENST00000334035 BPTFQ12830 3046 aa4.04□□□□□ -1.76
CPEB4-202ENST00000334035 SPG11Q96JI7 2443 aa4.04□□□□□ -1.76
CPEB4-202ENST00000334035 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
CPEB4-202ENST00000334035 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.76
CPEB4-202ENST00000334035 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
CPEB4-202ENST00000334035 EP400Q96L91 3159 aa4.01□□□□□ -1.77
CPEB4-202ENST00000334035 HIVEP3Q5T1R4 2406 aa4.01□□□□□ -1.77
CPEB4-202ENST00000334035 RPL37P61927 97 aaKnown RBP4□□□□□ -1.77
CPEB4-202ENST00000334035 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
CPEB4-202ENST00000334035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.99□□□□□ -1.77
CPEB4-202ENST00000334035 NCOR2Q9Y618 2525 aa3.99□□□□□ -1.77
CPEB4-202ENST00000334035 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
CPEB4-202ENST00000334035 TLN1Q9Y490 2541 aaKnown RBP3.98□□□□□ -1.77
CPEB4-202ENST00000334035 SRCAPQ6ZRS2 3230 aa3.98□□□□□ -1.77
CPEB4-202ENST00000334035 S4R3F8 94 aa3.95□□□□□ -1.78
CPEB4-202ENST00000334035 SONP18583 2426 aaKnown RBP3.93□□□□□ -1.78
CPEB4-202ENST00000334035 PIEZO2Q9H5I5 2752 aa3.93□□□□□ -1.78
CPEB4-202ENST00000334035 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
CPEB4-202ENST00000334035 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
CPEB4-202ENST00000334035 IGF2RP11717 2491 aa3.93□□□□□ -1.78
CPEB4-202ENST00000334035 PIEZO1Q92508 2521 aa3.92□□□□□ -1.78
CPEB4-202ENST00000334035 CR1P17927 2039 aa3.92□□□□□ -1.78
CPEB4-202ENST00000334035 MYO9AB2RTY4 2548 aa3.92□□□□□ -1.78
CPEB4-202ENST00000334035 PANO1I0J062 215 aa3.92□□□□□ -1.78
CPEB4-202ENST00000334035 ABCA2Q9BZC7 2435 aa3.91□□□□□ -1.78
CPEB4-202ENST00000334035 DOPEY1Q5JWR5 2465 aa3.91□□□□□ -1.78
CPEB4-202ENST00000334035 CCDC168Q8NDH2 2452 aa3.89□□□□□ -1.79
CPEB4-202ENST00000334035 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
CPEB4-202ENST00000334035 CACNA1AO00555 2505 aa3.88□□□□□ -1.79
CPEB4-202ENST00000334035 Q6ZSA8 131 aa3.88□□□□□ -1.79
CPEB4-202ENST00000334035 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
CPEB4-202ENST00000334035 FN1P02751 2386 aaKnown RBP3.86□□□□□ -1.79
CPEB4-202ENST00000334035 KRTAP1-5Q9BYS1 174 aa3.86□□□□□ -1.79
CPEB4-202ENST00000334035 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
CPEB4-202ENST00000334035 A8MU10 97 aa3.85□□□□□ -1.79
CPEB4-202ENST00000334035 M0R2T5 61 aa3.85□□□□□ -1.79
CPEB4-202ENST00000334035 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
CPEB4-202ENST00000334035 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.8
CPEB4-202ENST00000334035 TLN2Q9Y4G6 2542 aa3.84□□□□□ -1.8
CPEB4-202ENST00000334035 USP9XQ93008 2570 aaPredicted RBP3.83□□□□□ -1.8
CPEB4-202ENST00000334035 WDR87Q6ZQQ6 2873 aa3.83□□□□□ -1.8
CPEB4-202ENST00000334035 ANKRD17O75179 2603 aaKnown RBP3.82□□□□□ -1.8
CPEB4-202ENST00000334035 LRRK2Q5S007 2527 aa3.81□□□□□ -1.8
CPEB4-202ENST00000334035 M0QZ58 72 aa3.8□□□□□ -1.8
CPEB4-202ENST00000334035 R4GN34 69 aa3.8□□□□□ -1.8
CPEB4-202ENST00000334035 KRTAP11-1Q8IUC1 163 aa3.8□□□□□ -1.8
CPEB4-202ENST00000334035 ABCA12Q86UK0 2595 aa3.79□□□□□ -1.8
CPEB4-202ENST00000334035 A8MUU9 505 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms