RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
SNRNP200-201ENST00000323853 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
SNRNP200-201ENST00000323853 NCOR2Q9Y618 2525 aa6.97□□□□□ -1.29
SNRNP200-201ENST00000323853 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
SNRNP200-201ENST00000323853 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
SNRNP200-201ENST00000323853 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
SNRNP200-201ENST00000323853 WDR87Q6ZQQ6 2873 aa6.92□□□□□ -1.3
SNRNP200-201ENST00000323853 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
SNRNP200-201ENST00000323853 BPTFQ12830 3046 aa6.9□□□□□ -1.31
SNRNP200-201ENST00000323853 TLN1Q9Y490 2541 aaKnown RBP6.89□□□□□ -1.31
SNRNP200-201ENST00000323853 SMR3BP02814 79 aaPredicted RBP6.89□□□□□ -1.31
SNRNP200-201ENST00000323853 J3QL48 77 aa6.89□□□□□ -1.31
SNRNP200-201ENST00000323853 CCDC168Q8NDH2 2452 aa6.88□□□□□ -1.31
SNRNP200-201ENST00000323853 C2CD3Q4AC94 2353 aa6.87□□□□□ -1.31
SNRNP200-201ENST00000323853 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
SNRNP200-201ENST00000323853 CD164Q04900 197 aa6.86□□□□□ -1.31
SNRNP200-201ENST00000323853 SONP18583 2426 aaKnown RBP6.86□□□□□ -1.31
SNRNP200-201ENST00000323853 NOTCH2Q04721 2471 aa6.85□□□□□ -1.31
SNRNP200-201ENST00000323853 Q1T7F1 81 aa6.85□□□□□ -1.31
SNRNP200-201ENST00000323853 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
SNRNP200-201ENST00000323853 CACNA1AO00555 2505 aa6.83□□□□□ -1.32
SNRNP200-201ENST00000323853 Q8N1X5 172 aa6.83□□□□□ -1.32
SNRNP200-201ENST00000323853 DNAH12Q6ZR08 3092 aa6.83□□□□□ -1.32
SNRNP200-201ENST00000323853 Q8NDZ9 215 aa6.83□□□□□ -1.32
SNRNP200-201ENST00000323853 CENPFP49454 3210 aa6.83□□□□□ -1.32
SNRNP200-201ENST00000323853 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
SNRNP200-201ENST00000323853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
SNRNP200-201ENST00000323853 WIPF1O43516 503 aa6.81□□□□□ -1.32
SNRNP200-201ENST00000323853 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
SNRNP200-201ENST00000323853 ABCA2Q9BZC7 2435 aa6.81□□□□□ -1.32
SNRNP200-201ENST00000323853 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
SNRNP200-201ENST00000323853 LCA10Q71F78 164 aa6.79□□□□□ -1.32
SNRNP200-201ENST00000323853 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
SNRNP200-201ENST00000323853 TNP2Q05952 138 aa6.79□□□□□ -1.32
SNRNP200-201ENST00000323853 LRRK2Q5S007 2527 aa6.79□□□□□ -1.32
SNRNP200-201ENST00000323853 ANKRD17O75179 2603 aaKnown RBP6.78□□□□□ -1.32
SNRNP200-201ENST00000323853 SPRR1AP35321 89 aa6.77□□□□□ -1.33
SNRNP200-201ENST00000323853 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
SNRNP200-201ENST00000323853 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
SNRNP200-201ENST00000323853 A0A0D9SG42 100 aa6.74□□□□□ -1.33
SNRNP200-201ENST00000323853 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
SNRNP200-201ENST00000323853 HRES1P13985 223 aa6.74□□□□□ -1.33
SNRNP200-201ENST00000323853 Q75L30 129 aa6.74□□□□□ -1.33
SNRNP200-201ENST00000323853 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
SNRNP200-201ENST00000323853 ANKRD11Q6UB99 2663 aaPredicted RBP6.73□□□□□ -1.33
SNRNP200-201ENST00000323853 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
SNRNP200-201ENST00000323853 PIEZO1Q92508 2521 aa6.73□□□□□ -1.33
SNRNP200-201ENST00000323853 Q5XG85 94 aa6.73□□□□□ -1.33
SNRNP200-201ENST00000323853 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
SNRNP200-201ENST00000323853 ABCA12Q86UK0 2595 aa6.7□□□□□ -1.34
SNRNP200-201ENST00000323853 CR1P17927 2039 aa6.69□□□□□ -1.34
SNRNP200-201ENST00000323853 FN1P02751 2386 aaKnown RBP6.69□□□□□ -1.34
SNRNP200-201ENST00000323853 SPRR1BP22528 89 aa6.69□□□□□ -1.34
SNRNP200-201ENST00000323853 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
SNRNP200-201ENST00000323853 LINC01558Q9Y6Z2 57 aa6.68□□□□□ -1.34
SNRNP200-201ENST00000323853 MYO9AB2RTY4 2548 aa6.68□□□□□ -1.34
SNRNP200-201ENST00000323853 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
SNRNP200-201ENST00000323853 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
SNRNP200-201ENST00000323853 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
SNRNP200-201ENST00000323853 ZCCHC13Q8WW36 166 aaKnown RBP6.66□□□□□ -1.34
SNRNP200-201ENST00000323853 CEP295Q9C0D2 2601 aa6.65□□□□□ -1.34
SNRNP200-201ENST00000323853 FP248Q71RG6 208 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-201ENST00000323853 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-201ENST00000323853 A0A1B0GU33 70 aa6.64□□□□□ -1.35
SNRNP200-201ENST00000323853 UTRNP46939 3433 aa6.64□□□□□ -1.35
SNRNP200-201ENST00000323853 USP9XQ93008 2570 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-201ENST00000323853 Q5W150 140 aa6.63□□□□□ -1.35
SNRNP200-201ENST00000323853 Q6ZSA8 131 aa6.63□□□□□ -1.35
SNRNP200-201ENST00000323853 KRTAP1-5Q9BYS1 174 aa6.62□□□□□ -1.35
SNRNP200-201ENST00000323853 Q5VV11 94 aa6.6□□□□□ -1.35
SNRNP200-201ENST00000323853 TLN2Q9Y4G6 2542 aa6.59□□□□□ -1.35
SNRNP200-201ENST00000323853 S4R3F8 94 aa6.58□□□□□ -1.36
SNRNP200-201ENST00000323853 LINC00483Q53H64 154 aa6.58□□□□□ -1.36
SNRNP200-201ENST00000323853 C5orf42Q9H799 3197 aa6.58□□□□□ -1.36
SNRNP200-201ENST00000323853 MYO18BQ8IUG5 2567 aa6.56□□□□□ -1.36
SNRNP200-201ENST00000323853 JMJD1CQ15652 2540 aa6.56□□□□□ -1.36
SNRNP200-201ENST00000323853 PKD1L2Q7Z442 2459 aa6.54□□□□□ -1.36
SNRNP200-201ENST00000323853 CHD7Q9P2D1 2997 aa6.54□□□□□ -1.36
SNRNP200-201ENST00000323853 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
SNRNP200-201ENST00000323853 POLQO75417 2590 aa6.54□□□□□ -1.36
SNRNP200-201ENST00000323853 OXTP01178 125 aa6.54□□□□□ -1.36
SNRNP200-201ENST00000323853 KRTAP4-16G5E9R7 235 aaPredicted RBP6.53□□□□□ -1.36
SNRNP200-201ENST00000323853 SPINK7P58062 85 aa6.53□□□□□ -1.36
SNRNP200-201ENST00000323853 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
SNRNP200-201ENST00000323853 CHD8Q9HCK8 2581 aa6.5□□□□□ -1.37
SNRNP200-201ENST00000323853 KRTAP10-1P60331 282 aa6.48□□□□□ -1.37
SNRNP200-201ENST00000323853 CHD9Q3L8U1 2897 aa6.48□□□□□ -1.37
SNRNP200-201ENST00000323853 Q6ZR54 194 aa6.48□□□□□ -1.37
SNRNP200-201ENST00000323853 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
SNRNP200-201ENST00000323853 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
SNRNP200-201ENST00000323853 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
SNRNP200-201ENST00000323853 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
SNRNP200-201ENST00000323853 SPTBN4Q9H254 2564 aa6.46□□□□□ -1.38
SNRNP200-201ENST00000323853 CEP350Q5VT06 3117 aa6.46□□□□□ -1.38
SNRNP200-201ENST00000323853 PANO1I0J062 215 aa6.45□□□□□ -1.38
SNRNP200-201ENST00000323853 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
SNRNP200-201ENST00000323853 HTTP42858 3142 aa6.45□□□□□ -1.38
SNRNP200-201ENST00000323853 ZFYVE26Q68DK2 2539 aa6.44□□□□□ -1.38
SNRNP200-201ENST00000323853 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
SNRNP200-201ENST00000323853 ACANP16112 2415 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms