RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
CD46-201ENST00000322875 A0A1W2PNM2 257 aa5.1□□□□□ -1.59
CD46-201ENST00000322875 DSCR10P59022 87 aa5.1□□□□□ -1.59
CD46-201ENST00000322875 KPRPQ5T749 579 aaPredicted RBP5.1□□□□□ -1.59
CD46-201ENST00000322875 FBN2P35556 2912 aa5.1□□□□□ -1.59
CD46-201ENST00000322875 ETDCA0A1B0GVM5 59 aa5.1□□□□□ -1.59
CD46-201ENST00000322875 LYRM9A8MSI8 78 aa5.1□□□□□ -1.59
CD46-201ENST00000322875 NIPBLQ6KC79 2804 aaeCLIP5.1□□□□□ -1.596e-8■■■■■ 30.6
CD46-201ENST00000322875 SPRR4Q96PI1 79 aa5.09□□□□□ -1.59
CD46-201ENST00000322875 ANK3Q12955 4377 aaKnown RBP5.09□□□□□ -1.59
CD46-201ENST00000322875 KRTAP26-1Q6PEX3 210 aa5.09□□□□□ -1.59
CD46-201ENST00000322875 PSPHP1O15172 72 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 CD164Q04900 197 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 EGFEM1PQ0D2K5 195 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 SYCNQ0VAF6 134 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 LELP1Q5T871 98 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 KCNQ1DNQ9H478 68 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 NOTCH2Q04721 2471 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 Q5VV11 94 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 DNAJC9-AS1A6NH13 148 aa5.08□□□□□ -1.6
CD46-201ENST00000322875 ST20-AS1Q8NBB2 130 aa5.07□□□□□ -1.6
CD46-201ENST00000322875 A8MU10 97 aa5.07□□□□□ -1.6
CD46-201ENST00000322875 A8MUN3 132 aa5.06□□□□□ -1.6
CD46-201ENST00000322875 KRTAP4-16G5E9R7 235 aaPredicted RBP5.06□□□□□ -1.6
CD46-201ENST00000322875 K7EQZ3 153 aa5.06□□□□□ -1.6
CD46-201ENST00000322875 Q8NBF4 154 aa5.06□□□□□ -1.6
CD46-201ENST00000322875 ZNF469Q96JG9 3925 aaPredicted RBP5.06□□□□□ -1.6
CD46-201ENST00000322875 KRTAP1-3Q8IUG1 177 aa5.05□□□□□ -1.6
CD46-201ENST00000322875 C15orf56Q8N910 161 aa5.05□□□□□ -1.6
CD46-201ENST00000322875 NDUFB1O75438 58 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 LINC00588Q9Y4M8 146 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 OTOGQ6ZRI0 2925 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 CAMK2N2Q96S95 79 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 JMJD1CQ15652 2540 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 TLN2Q9Y4G6 2542 aa5.04□□□□□ -1.6
CD46-201ENST00000322875 F8P00451 2351 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 C1orf137Q5JT78 98 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 Q9BRP9 147 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 HCG22E2RYF7 251 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 Q8N9P0 234 aaPredicted RBP5.03□□□□□ -1.6
CD46-201ENST00000322875 SPRR1AP35321 89 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 SPANXA2-OT1Q8N9U9 137 aa5.03□□□□□ -1.6
CD46-201ENST00000322875 Q6ZRX8 168 aa5.02□□□□□ -1.61
CD46-201ENST00000322875 DEFB105AQ8NG35 78 aa5.02□□□□□ -1.61
CD46-201ENST00000322875 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
CD46-201ENST00000322875 POLQO75417 2590 aa5.02□□□□□ -1.61
CD46-201ENST00000322875 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
CD46-201ENST00000322875 UBE2BP63146 152 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 C7orf33Q8WU49 177 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 B9D2Q9BPU9 175 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 SERTAD4-AS1Q5TG53 156 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 Q8NAQ8 132 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 HIVEP1P15822 2718 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
CD46-201ENST00000322875 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
CD46-201ENST00000322875 DEFB4AO15263 64 aa5□□□□□ -1.61
CD46-201ENST00000322875 PRR4Q16378 134 aa5□□□□□ -1.61
CD46-201ENST00000322875 LIMD2Q9BT23 127 aa5□□□□□ -1.61
CD46-201ENST00000322875 UBE2AP49459 152 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 CCDC168Q8NDH2 2452 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 LCA10Q71F78 164 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 Q75L30 129 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 ITPR3Q14573 2671 aa4.99□□□□□ -1.61
CD46-201ENST00000322875 NF1P21359 2839 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 IGKV2D-24A0A075B6R9 120 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 A6NN06 94 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 H3BPC8 53 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 PHF5AQ7RTV0 110 aaKnown RBP4.98□□□□□ -1.61
CD46-201ENST00000322875 C9orf163Q8N9P6 203 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 DEFB135Q30KP9 77 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
CD46-201ENST00000322875 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
CD46-201ENST00000322875 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
CD46-201ENST00000322875 RBM12B-AS1Q9P1G2 102 aa4.97□□□□□ -1.61
CD46-201ENST00000322875 NBEAL2Q6ZNJ1 2754 aa4.97□□□□□ -1.61
CD46-201ENST00000322875 WFDC10BQ8IUB3 73 aa4.96□□□□□ -1.61
CD46-201ENST00000322875 MP68P56378 58 aa4.96□□□□□ -1.62
CD46-201ENST00000322875 KRTAP10-3P60369 221 aa4.96□□□□□ -1.62
CD46-201ENST00000322875 KRTAP1-1Q07627 177 aa4.96□□□□□ -1.62
CD46-201ENST00000322875 NKAPP1Q8N9T2 125 aa4.96□□□□□ -1.62
CD46-201ENST00000322875 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
CD46-201ENST00000322875 SPART-AS1P0CW21 52 aa4.95□□□□□ -1.62
CD46-201ENST00000322875 PLAC8Q9NZF1 115 aa4.95□□□□□ -1.62
CD46-201ENST00000322875 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
CD46-201ENST00000322875 LINC00476Q8WZB0 136 aa4.95□□□□□ -1.62
CD46-201ENST00000322875 RETNQ9HD89 108 aa4.95□□□□□ -1.62
CD46-201ENST00000322875 FN1P02751 2386 aaKnown RBP4.94□□□□□ -1.62
CD46-201ENST00000322875 H3BNG1 76 aa4.94□□□□□ -1.62
CD46-201ENST00000322875 APOC4P55056 127 aa4.94□□□□□ -1.62
CD46-201ENST00000322875 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
CD46-201ENST00000322875 MRPL55Q7Z7F7 128 aaKnown RBP4.94□□□□□ -1.62
CD46-201ENST00000322875 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
CD46-201ENST00000322875 NDUFS5O43920 106 aa4.93□□□□□ -1.62
CD46-201ENST00000322875 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
CD46-201ENST00000322875 RPL37AP8A6NKH3 93 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms