RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 IGHV3OR16-9A0A0B4J2B5 98 aa4.95□□□□□ -1.62
SMC1A-201ENST00000322213 LY6G6DO95868 133 aa4.95□□□□□ -1.62
SMC1A-201ENST00000322213 Q1T7F1 81 aa4.95□□□□□ -1.62
SMC1A-201ENST00000322213 C11orf72Q8NBR9 251 aa4.94□□□□□ -1.62
SMC1A-201ENST00000322213 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
SMC1A-201ENST00000322213 DCHS2Q6V1P9 2916 aa4.94□□□□□ -1.62
SMC1A-201ENST00000322213 C6orf223Q8N319 242 aa4.93□□□□□ -1.62
SMC1A-201ENST00000322213 ZNF702PQ9H963 129 aa4.93□□□□□ -1.62
SMC1A-201ENST00000322213 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
SMC1A-201ENST00000322213 ELOF1P60002 83 aaKnown RBP4.93□□□□□ -1.62
SMC1A-201ENST00000322213 Q9UF83 564 aa4.93□□□□□ -1.62
SMC1A-201ENST00000322213 C10orf99Q6UWK7 81 aa4.93□□□□□ -1.62
SMC1A-201ENST00000322213 FBN2P35556 2912 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 H3BS24 57 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 IGHV4-31P0DP07 118 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 C11orf45Q8TAV5 145 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
SMC1A-201ENST00000322213 MDFIQ99750 246 aa4.91□□□□□ -1.62
SMC1A-201ENST00000322213 IGLV6-57P01721 117 aa4.91□□□□□ -1.62
SMC1A-201ENST00000322213 Q6ZTC4 211 aa4.9□□□□□ -1.62
SMC1A-201ENST00000322213 FP248Q71RG6 208 aaPredicted RBP4.9□□□□□ -1.62
SMC1A-201ENST00000322213 LAMA5O15230 3695 aa4.9□□□□□ -1.62
SMC1A-201ENST00000322213 Q9BRP9 147 aa4.9□□□□□ -1.62
SMC1A-201ENST00000322213 ACYP2P14621 99 aa4.9□□□□□ -1.63
SMC1A-201ENST00000322213 LCA10Q71F78 164 aa4.9□□□□□ -1.63
SMC1A-201ENST00000322213 OBSCN-AS1Q96MR7 158 aa4.9□□□□□ -1.63
SMC1A-201ENST00000322213 A0A1B0GU69 56 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 TRBV7-4A0A0J9YYF1 115 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 ASPMQ8IZT6 3477 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 LINC01006Q8NI28 216 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 MXRA5Q9NR99 2828 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 PCOTHQ58A44 107 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 A0A096LNI7 61 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
SMC1A-201ENST00000322213 DEFB131BA0A096LNP1 70 aa4.88□□□□□ -1.63
SMC1A-201ENST00000322213 ODF3L2Q3SX64 289 aa4.88□□□□□ -1.63
SMC1A-201ENST00000322213 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
SMC1A-201ENST00000322213 A0A087WSZ3 146 aa4.88□□□□□ -1.63
SMC1A-201ENST00000322213 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
SMC1A-201ENST00000322213 C6orf48Q9UBA6 75 aa4.87□□□□□ -1.63
SMC1A-201ENST00000322213 KIAA0087Q14695 138 aa4.87□□□□□ -1.63
SMC1A-201ENST00000322213 LINC00167Q96N53 147 aa4.87□□□□□ -1.63
SMC1A-201ENST00000322213 Q8NBF4 154 aa4.87□□□□□ -1.63
SMC1A-201ENST00000322213 OXTP01178 125 aa4.87□□□□□ -1.63
SMC1A-201ENST00000322213 CFAP47Q6ZTR5 3102 aa4.86□□□□□ -1.63
SMC1A-201ENST00000322213 DEFB116Q30KQ4 102 aa4.86□□□□□ -1.63
SMC1A-201ENST00000322213 Q6ZRX8 168 aa4.86□□□□□ -1.63
SMC1A-201ENST00000322213 LYPD5Q6UWN5 251 aa4.86□□□□□ -1.63
SMC1A-201ENST00000322213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.85□□□□□ -1.63
SMC1A-201ENST00000322213 A8MUN3 132 aa4.85□□□□□ -1.63
SMC1A-201ENST00000322213 SPINK6Q6UWN8 80 aa4.85□□□□□ -1.63
SMC1A-201ENST00000322213 COA5Q86WW8 74 aa4.85□□□□□ -1.63
SMC1A-201ENST00000322213 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
SMC1A-201ENST00000322213 HRNRQ86YZ3 2850 aaPredicted RBP4.85□□□□□ -1.63
SMC1A-201ENST00000322213 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
SMC1A-201ENST00000322213 SPENQ96T58 3664 aaKnown RBP4.84□□□□□ -1.63
SMC1A-201ENST00000322213 KLK9Q2XQG4 91 aa4.84□□□□□ -1.63
SMC1A-201ENST00000322213 EIF4EBP3O60516 100 aaPredicted RBP4.84□□□□□ -1.63
SMC1A-201ENST00000322213 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
SMC1A-201ENST00000322213 IGLV1-51P01701 117 aa4.83□□□□□ -1.64
SMC1A-201ENST00000322213 FSHBP01225 129 aa4.82□□□□□ -1.64
SMC1A-201ENST00000322213 CDC42SE1Q9NRR8 79 aa4.82□□□□□ -1.64
SMC1A-201ENST00000322213 SPEGQ15772 3267 aa4.82□□□□□ -1.64
SMC1A-201ENST00000322213 GVQW2A0A096LPI5 108 aaPredicted RBP4.82□□□□□ -1.64
SMC1A-201ENST00000322213 MOBPQ13875 183 aa4.82□□□□□ -1.64
SMC1A-201ENST00000322213 K7EQZ3 153 aa4.81□□□□□ -1.64
SMC1A-201ENST00000322213 A8MWP4 228 aa4.81□□□□□ -1.64
SMC1A-201ENST00000322213 C19orf84I3L1E1 186 aa4.81□□□□□ -1.64
SMC1A-201ENST00000322213 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
SMC1A-201ENST00000322213 PRLHP81277 87 aa4.8□□□□□ -1.64
SMC1A-201ENST00000322213 LINC00476Q8WZB0 136 aa4.79□□□□□ -1.64
SMC1A-201ENST00000322213 C16orf95Q9H693 158 aa4.79□□□□□ -1.64
SMC1A-201ENST00000322213 FAM229BQ4G0N7 80 aa4.78□□□□□ -1.64
SMC1A-201ENST00000322213 Q6ZRP5 223 aa4.78□□□□□ -1.64
SMC1A-201ENST00000322213 OCR1Q9BZK8 76 aa4.78□□□□□ -1.64
SMC1A-201ENST00000322213 CIRBP-AS1Q8TBR5 109 aa4.78□□□□□ -1.64
SMC1A-201ENST00000322213 TENM3Q9P273 2699 aa4.78□□□□□ -1.64
SMC1A-201ENST00000322213 UQCR11O14957 56 aa4.77□□□□□ -1.65
SMC1A-201ENST00000322213 Q75L30 129 aa4.77□□□□□ -1.65
SMC1A-201ENST00000322213 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
SMC1A-201ENST00000322213 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
SMC1A-201ENST00000322213 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
SMC1A-201ENST00000322213 C22orf24Q9Y442 160 aa4.75□□□□□ -1.65
SMC1A-201ENST00000322213 LINC00588Q9Y4M8 146 aa4.75□□□□□ -1.65
SMC1A-201ENST00000322213 AVPP01185 164 aa4.75□□□□□ -1.65
SMC1A-201ENST00000322213 KCNQ1DNQ9H478 68 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 LINC00528Q8N1L1 170 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 LINC01556Q5JQF7 62 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 EPM2AB3EWF7 344 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 ZNF575Q86XF7 245 aa4.74□□□□□ -1.65
SMC1A-201ENST00000322213 ZFHX4Q86UP3 3567 aa4.73□□□□□ -1.65
SMC1A-201ENST00000322213 SPINK1P00995 79 aa4.73□□□□□ -1.65
SMC1A-201ENST00000322213 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
SMC1A-201ENST00000322213 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
SMC1A-201ENST00000322213 IGKV2D-30A0A075B6S6 120 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms