RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-201ENST00000320081 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
CLIP4-201ENST00000320081 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
CLIP4-201ENST00000320081 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
CLIP4-201ENST00000320081 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
CLIP4-201ENST00000320081 LINC00167Q96N53 147 aa11.16□□□□□ -0.62
CLIP4-201ENST00000320081 TRAV7A0A075B6U4 112 aa11.15□□□□□ -0.62
CLIP4-201ENST00000320081 ST20-AS1Q8NBB2 130 aa11.15□□□□□ -0.62
CLIP4-201ENST00000320081 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
CLIP4-201ENST00000320081 Q9BRP9 147 aa11.15□□□□□ -0.62
CLIP4-201ENST00000320081 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.63
CLIP4-201ENST00000320081 CHTF8P0CG12 524 aa11.14□□□□□ -0.63
CLIP4-201ENST00000320081 FAM168BA1KXE4 195 aa11.14□□□□□ -0.63
CLIP4-201ENST00000320081 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-201ENST00000320081 CIRBP-AS1Q8TBR5 109 aa11.13□□□□□ -0.63
CLIP4-201ENST00000320081 CR1P17927 2039 aa11.13□□□□□ -0.63
CLIP4-201ENST00000320081 APCP25054 2843 aa11.13□□□□□ -0.63
CLIP4-201ENST00000320081 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
CLIP4-201ENST00000320081 C2orf48Q96LS8 159 aa11.12□□□□□ -0.63
CLIP4-201ENST00000320081 Q6ZRP5 223 aa11.12□□□□□ -0.63
CLIP4-201ENST00000320081 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
CLIP4-201ENST00000320081 A0A1W2PNN7 141 aa11.11□□□□□ -0.63
CLIP4-201ENST00000320081 KRTAP1-3Q8IUG1 177 aa11.1□□□□□ -0.63
CLIP4-201ENST00000320081 IGHV6-1A0A0B4J1U7 121 aa11.1□□□□□ -0.63
CLIP4-201ENST00000320081 TMEM254Q8TBM7 123 aa11.09□□□□□ -0.63
CLIP4-201ENST00000320081 C4orf26Q17RF5 130 aa11.08□□□□□ -0.64
CLIP4-201ENST00000320081 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
CLIP4-201ENST00000320081 CSMD1Q96PZ7 3565 aa11.06□□□□□ -0.64
CLIP4-201ENST00000320081 IL17DQ8TAD2 202 aa11.06□□□□□ -0.64
CLIP4-201ENST00000320081 PSPHP1O15172 72 aa11.06□□□□□ -0.64
CLIP4-201ENST00000320081 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
CLIP4-201ENST00000320081 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
CLIP4-201ENST00000320081 CRYGAP11844 174 aa11.04□□□□□ -0.64
CLIP4-201ENST00000320081 SERTAD4-AS1Q5TG53 156 aa11.04□□□□□ -0.64
CLIP4-201ENST00000320081 TM2D3Q9BRN9 247 aa11.04□□□□□ -0.64
CLIP4-201ENST00000320081 Q6ZQT0 140 aa11.04□□□□□ -0.64
CLIP4-201ENST00000320081 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
CLIP4-201ENST00000320081 PRYO14603 147 aa11.03□□□□□ -0.64
CLIP4-201ENST00000320081 KRTAP10-11P60412 298 aa11.02□□□□□ -0.64
CLIP4-201ENST00000320081 CASC2Q6XLA1 102 aa11.01□□□□□ -0.65
CLIP4-201ENST00000320081 FAM104AQ969W3 186 aa11.01□□□□□ -0.65
CLIP4-201ENST00000320081 KRTAP1-1Q07627 177 aa11.01□□□□□ -0.65
CLIP4-201ENST00000320081 MDFIQ99750 246 aa11.01□□□□□ -0.65
CLIP4-201ENST00000320081 NDUFC1O43677 76 aa11.01□□□□□ -0.65
CLIP4-201ENST00000320081 ELOF1P60002 83 aaKnown RBP11.01□□□□□ -0.65
CLIP4-201ENST00000320081 SPENQ96T58 3664 aaKnown RBP11□□□□□ -0.65
CLIP4-201ENST00000320081 MXRA5Q9NR99 2828 aa11□□□□□ -0.65
CLIP4-201ENST00000320081 VPREB1P12018 145 aa11□□□□□ -0.65
CLIP4-201ENST00000320081 IGLV5-52A0A0A0MRZ9 124 aa11□□□□□ -0.65
CLIP4-201ENST00000320081 RPL37AP61513 92 aaKnown RBP11□□□□□ -0.65
CLIP4-201ENST00000320081 SVEP1Q4LDE5 3571 aa10.99□□□□□ -0.65
CLIP4-201ENST00000320081 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
CLIP4-201ENST00000320081 TENM4Q6N022 2769 aa10.97□□□□□ -0.65
CLIP4-201ENST00000320081 SMIM26A0A096LP01 95 aa10.96□□□□□ -0.65
CLIP4-201ENST00000320081 A6NED7 52 aa10.96□□□□□ -0.65
CLIP4-201ENST00000320081 DNAH10OSP0CZ25 163 aa10.95□□□□□ -0.66
CLIP4-201ENST00000320081 NUPR2A6NF83 97 aa10.95□□□□□ -0.66
CLIP4-201ENST00000320081 LINC00474Q9P2X8 69 aa10.95□□□□□ -0.66
CLIP4-201ENST00000320081 Q6ZRX8 168 aa10.94□□□□□ -0.66
CLIP4-201ENST00000320081 LINC00476Q8WZB0 136 aa10.94□□□□□ -0.66
CLIP4-201ENST00000320081 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
CLIP4-201ENST00000320081 HCG22E2RYF7 251 aa10.92□□□□□ -0.66
CLIP4-201ENST00000320081 SERP1Q9Y6X1 66 aa10.92□□□□□ -0.66
CLIP4-201ENST00000320081 H0Y9P7 68 aa10.92□□□□□ -0.66
CLIP4-201ENST00000320081 MOBPQ13875 183 aa10.91□□□□□ -0.66
CLIP4-201ENST00000320081 TRBV7-6A0A0J9YX20 115 aa10.91□□□□□ -0.66
CLIP4-201ENST00000320081 CXCL6P80162 114 aa10.91□□□□□ -0.66
CLIP4-201ENST00000320081 C15orf56Q8N910 161 aa10.91□□□□□ -0.66
CLIP4-201ENST00000320081 EPM2AB3EWF7 344 aa10.89□□□□□ -0.67
CLIP4-201ENST00000320081 PRR34Q9NV39 138 aa10.89□□□□□ -0.67
CLIP4-201ENST00000320081 ZNF706Q9Y5V0 76 aaPredicted RBP10.89□□□□□ -0.67
CLIP4-201ENST00000320081 SPINK1P00995 79 aa10.88□□□□□ -0.67
CLIP4-201ENST00000320081 RPS28P62857 69 aaKnown RBP10.88□□□□□ -0.67
CLIP4-201ENST00000320081 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
CLIP4-201ENST00000320081 Q8NBF4 154 aa10.88□□□□□ -0.67
CLIP4-201ENST00000320081 K7EIL1 84 aa10.87□□□□□ -0.67
CLIP4-201ENST00000320081 PRR15LQ9BU68 103 aa10.87□□□□□ -0.67
CLIP4-201ENST00000320081 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-201ENST00000320081 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
CLIP4-201ENST00000320081 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
CLIP4-201ENST00000320081 H3BNG1 76 aa10.84□□□□□ -0.67
CLIP4-201ENST00000320081 K7EQZ3 153 aa10.84□□□□□ -0.67
CLIP4-201ENST00000320081 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
CLIP4-201ENST00000320081 C1orf64Q8NEQ6 169 aa10.83□□□□□ -0.68
CLIP4-201ENST00000320081 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
CLIP4-201ENST00000320081 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
CLIP4-201ENST00000320081 CYSTM1Q9H1C7 97 aa10.83□□□□□ -0.68
CLIP4-201ENST00000320081 LOC110117498A0A087WWA1 95 aa10.82□□□□□ -0.68
CLIP4-201ENST00000320081 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
CLIP4-201ENST00000320081 DMBT1Q9UGM3 2413 aaPredicted RBP10.81□□□□□ -0.68
CLIP4-201ENST00000320081 Q8N377 158 aa10.81□□□□□ -0.68
CLIP4-201ENST00000320081 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
CLIP4-201ENST00000320081 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
CLIP4-201ENST00000320081 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
CLIP4-201ENST00000320081 NBDYA0A0U1RRE5 68 aa10.79□□□□□ -0.68
CLIP4-201ENST00000320081 Q8NDZ9 215 aa10.79□□□□□ -0.68
CLIP4-201ENST00000320081 V9GYY9 64 aa10.78□□□□□ -0.68
CLIP4-201ENST00000320081 SEC61GP60059 68 aa10.78□□□□□ -0.68
CLIP4-201ENST00000320081 C16orf90A8MZG2 172 aa10.77□□□□□ -0.69
CLIP4-201ENST00000320081 IGKV2D-30A0A075B6S6 120 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms