RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 GIG44P09565 113 aaPredicted RBP6.29□□□□□ -1.4
COL21A1-201ENST00000244728 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 LOC110117498A0A087WWA1 95 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 KRTAP10-3P60369 221 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 PRLHP81277 87 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
COL21A1-201ENST00000244728 KRTAP1-3Q8IUG1 177 aa6.28□□□□□ -1.4
COL21A1-201ENST00000244728 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
COL21A1-201ENST00000244728 BCE1O60756 84 aa6.28□□□□□ -1.4
COL21A1-201ENST00000244728 C6orf48Q9UBA6 75 aa6.28□□□□□ -1.4
COL21A1-201ENST00000244728 C1orf137Q5JT78 98 aa6.27□□□□□ -1.41
COL21A1-201ENST00000244728 V9GYY9 64 aa6.27□□□□□ -1.41
COL21A1-201ENST00000244728 CSNK1G2-AS1Q8NCQ2 148 aa6.27□□□□□ -1.41
COL21A1-201ENST00000244728 DCHS2Q6V1P9 2916 aa6.27□□□□□ -1.41
COL21A1-201ENST00000244728 FBN2P35556 2912 aa6.27□□□□□ -1.41
COL21A1-201ENST00000244728 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
COL21A1-201ENST00000244728 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
COL21A1-201ENST00000244728 MRPL55Q7Z7F7 128 aaKnown RBP6.25□□□□□ -1.41
COL21A1-201ENST00000244728 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
COL21A1-201ENST00000244728 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
COL21A1-201ENST00000244728 KIAA0087Q14695 138 aa6.25□□□□□ -1.41
COL21A1-201ENST00000244728 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
COL21A1-201ENST00000244728 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
COL21A1-201ENST00000244728 NIPBLQ6KC79 2804 aaeCLIP6.25□□□□□ -1.41
COL21A1-201ENST00000244728 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
COL21A1-201ENST00000244728 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
COL21A1-201ENST00000244728 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
COL21A1-201ENST00000244728 H7BZZ5 65 aa6.23□□□□□ -1.41
COL21A1-201ENST00000244728 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
COL21A1-201ENST00000244728 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
COL21A1-201ENST00000244728 IGLV6-57P01721 117 aa6.23□□□□□ -1.41
COL21A1-201ENST00000244728 A0A087WSZ3 146 aa6.23□□□□□ -1.41
COL21A1-201ENST00000244728 RELNP78509 3460 aa6.23□□□□□ -1.41
COL21A1-201ENST00000244728 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
COL21A1-201ENST00000244728 KMT2BQ9UMN6 2715 aaPredicted RBP6.22□□□□□ -1.41
COL21A1-201ENST00000244728 APCP25054 2843 aa6.22□□□□□ -1.41
COL21A1-201ENST00000244728 PSPHP1O15172 72 aa6.22□□□□□ -1.41
COL21A1-201ENST00000244728 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
COL21A1-201ENST00000244728 MDFIQ99750 246 aa6.22□□□□□ -1.41
COL21A1-201ENST00000244728 KLKP1Q107X0 134 aa6.21□□□□□ -1.41
COL21A1-201ENST00000244728 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.41
COL21A1-201ENST00000244728 LINC00588Q9Y4M8 146 aa6.21□□□□□ -1.41
COL21A1-201ENST00000244728 KRTAP10-11P60412 298 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 LINC00167Q96N53 147 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 LINC00336Q6ZUF6 198 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
COL21A1-201ENST00000244728 Q9BRP9 147 aa6.2□□□□□ -1.42
COL21A1-201ENST00000244728 SMG1Q96Q15 3661 aaKnown RBP6.19□□□□□ -1.42
COL21A1-201ENST00000244728 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
COL21A1-201ENST00000244728 CR1P17927 2039 aa6.19□□□□□ -1.42
COL21A1-201ENST00000244728 C1orf134Q5TEV5 83 aa6.18□□□□□ -1.42
COL21A1-201ENST00000244728 VPREB1P12018 145 aa6.17□□□□□ -1.42
COL21A1-201ENST00000244728 Q6ZRP5 223 aa6.17□□□□□ -1.42
COL21A1-201ENST00000244728 TRBV7-4A0A0J9YYF1 115 aa6.16□□□□□ -1.42
COL21A1-201ENST00000244728 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
COL21A1-201ENST00000244728 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
COL21A1-201ENST00000244728 K7EIL1 84 aa6.16□□□□□ -1.42
COL21A1-201ENST00000244728 TENM4Q6N022 2769 aa6.15□□□□□ -1.42
COL21A1-201ENST00000244728 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
COL21A1-201ENST00000244728 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.43
COL21A1-201ENST00000244728 ST20-AS1Q8NBB2 130 aa6.15□□□□□ -1.43
COL21A1-201ENST00000244728 HRNRQ86YZ3 2850 aaPredicted RBP6.15□□□□□ -1.43
COL21A1-201ENST00000244728 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
COL21A1-201ENST00000244728 A6NED7 52 aa6.14□□□□□ -1.43
COL21A1-201ENST00000244728 H3BNG1 76 aa6.14□□□□□ -1.43
COL21A1-201ENST00000244728 LINC00528Q8N1L1 170 aa6.14□□□□□ -1.43
COL21A1-201ENST00000244728 ZNF706Q9Y5V0 76 aaPredicted RBP6.14□□□□□ -1.43
COL21A1-201ENST00000244728 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 CSMD2Q7Z408 3487 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 OXTP01178 125 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 Q8NBF4 154 aa6.13□□□□□ -1.43
COL21A1-201ENST00000244728 Q5XG85 94 aa6.12□□□□□ -1.43
COL21A1-201ENST00000244728 Q8NDZ9 215 aa6.12□□□□□ -1.43
COL21A1-201ENST00000244728 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
COL21A1-201ENST00000244728 ERC2-IT1O76042 136 aa6.12□□□□□ -1.43
COL21A1-201ENST00000244728 CASC2Q6XLA1 102 aa6.12□□□□□ -1.43
COL21A1-201ENST00000244728 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
COL21A1-201ENST00000244728 DNAH10OSP0CZ25 163 aa6.11□□□□□ -1.43
COL21A1-201ENST00000244728 SERTAD4-AS1Q5TG53 156 aa6.11□□□□□ -1.43
COL21A1-201ENST00000244728 Q6ZRX8 168 aa6.11□□□□□ -1.43
COL21A1-201ENST00000244728 H0Y9P7 68 aa6.11□□□□□ -1.43
COL21A1-201ENST00000244728 F8WDY8 70 aa6.1□□□□□ -1.43
COL21A1-201ENST00000244728 NBDYA0A0U1RRE5 68 aa6.1□□□□□ -1.43
COL21A1-201ENST00000244728 PCOTHQ58A44 107 aa6.1□□□□□ -1.43
COL21A1-201ENST00000244728 WIPF1O43516 503 aa6.09□□□□□ -1.43
COL21A1-201ENST00000244728 CASC10Q5T4H9 136 aa6.09□□□□□ -1.43
COL21A1-201ENST00000244728 K7EQZ3 153 aa6.08□□□□□ -1.44
COL21A1-201ENST00000244728 Q8N377 158 aa6.08□□□□□ -1.44
COL21A1-201ENST00000244728 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
COL21A1-201ENST00000244728 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
COL21A1-201ENST00000244728 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
COL21A1-201ENST00000244728 A0A1B0GW54 56 aa6.07□□□□□ -1.44
COL21A1-201ENST00000244728 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
COL21A1-201ENST00000244728 MOBPQ13875 183 aa6.07□□□□□ -1.44
COL21A1-201ENST00000244728 C15orf56Q8N910 161 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms