RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Trav19A0A0B4J1K4 119 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm17324Q8C6J8 137 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Hyls1Q9CXX0 307 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ssbp2Q9CYZ8 361 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tnrc6aQ3UHK8 1896 aaKnown RBP9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Bcl6bO88282 474 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Rpp25lQ99JH1 163 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Rpl36-ps4A0A140T8U4 117 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 ColqO35348 457 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 CrxO54751 299 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P04940 107 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P04941 107 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Timp3P39876 211 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 COA4Q8BT51 87 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tmem210Q9D2F0 147 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Q8CF25 301 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gtf2h5Q8K2X8 71 aa9.49□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tmem177Q8BPE4 311 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm9913Q8BQQ2 135 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Zfp407G3UVV3 2246 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Csn3P06796 181 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Fgf4P11403 202 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm10447Q3UQ92 135 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tusc5Q8C838 173 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr1402Q8VET1 320 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ypel3P61237 119 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Olfr433Q7TRV9 314 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 PifoQ9D9W1 207 aa9.48□□□□□ -0.89
Pcif1-201ENSMUST00000041643 H2al2bA9Z055 111 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm5105Q8C6Y9 112 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Il1f10Q8R459 152 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ighv1-39A0A075B5V5 117 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm7075D3Z497 112 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 GalmQ8K157 342 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 CklfQ9DAS1 152 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Srsf9Q9D0B0 222 aaKnown RBP9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Gm17430F6RSK3 157 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Foxh1O88621 401 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P01741 114 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P0C1Z5 52 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Tctex1d4Q8CDY7 219 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Adamts20P59511 1906 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 AgrnA2ASQ1 1950 aa9.47□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Zic4Q61467 341 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Cacna1gQ5SUF7 2381 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Ighv1-19A0A0A6YWX0 117 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Rpl35aO55142 110 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P01727 129 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 P01792 123 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Igkv20-101-2A0A0G2JDU3 113 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Immp2lQ8BPT6 175 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Crybb3Q9JJU9 211 aa9.46□□□□□ -0.89
Pcif1-201ENSMUST00000041643 Trbv30A0A0B4J1P1 111 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Umad1E0CX23 159 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm21994F6T2D2 329 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm21874J3QNZ6 232 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Mllt11P97783 90 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 SeleQ00690 612 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Cotl1Q9CQI6 142 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tm4sf19E9Q9H8 206 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Fxyd7P59648 80 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Lypd1Q8BLC3 141 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Psmg3Q9CZH3 122 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Q9D8L0 127 aa9.46□□□□□ -0.9
Pcif1-201ENSMUST00000041643 SpxD3Z752 116 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Defa13P50711 93 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 MymxQ2Q5T5 84 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Vps25Q9CQ80 176 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Pcnx1Q9QYC1 2344 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr1381Q7TQT4 311 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 4933414I15RikQ9D4D5 133 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 VsirQ9D659 308 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ros1Q78DX7 2340 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Esp4A8R0T8 117 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm16442D3YZG3 307 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Atp5iQ06185 71 aaKnown RBP9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Tbx19Q99ME7 446 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Lyrm7Q9DA03 104 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Supt4h1bQ9Z199 117 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr523Q8VFE7 317 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 St6galnac6Q9JM95 333 aa9.45□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm15127B1AVZ5 449 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 P03980 138 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Mbd6Q3TY92 1003 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm4744D3Z3S5 154 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Adam8Q05910 826 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Prr12E9PYL2 2035 aaKnown RBP9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ighv3-8A0A075B5T0 131 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ighv1-62-3P01754 117 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Hoxa5P09021 270 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gata4Q08369 441 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Olfr982Q8VGB3 321 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Znf672Q99LH4 468 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Spata25Q9DA57 226 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ighv1-4A0A075B5T4 117 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Nat8f4G5E8L3 226 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Psmg4P0C7N9 123 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Gm9961Q8BNV2 113 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 9130230L23RikQ8CC80 163 aa9.44□□□□□ -0.9
Pcif1-201ENSMUST00000041643 Ighv1-9A0A0A6YW37 117 aa9.44□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms