RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Gkn1Q9CR36 201 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Alpk2Q91ZB0 2144 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Dock6Q8VDR9 2080 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 NdpP48744 131 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm10881P01642 115 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Tmem190Q9D2E9 166 aa18.88■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Samd13D3YUG0 102 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 9130213A22RikQ3V3T2 120 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Ube2wQ8VDW4 151 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 8030423J24RikQ9CX45 142 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Klf13Q9JJZ6 289 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Trav6d-7A0A075B6B0 112 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Tpsab1Q02844 273 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 P18532 116 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Lsm4Q9QXA5 137 aaKnown RBP18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Heatr5bQ8C547 2070 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 RhohQ9D3G9 191 aa18.87■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm10020E9QAZ2 204 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Cdkn1aP39689 159 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Rpl15Q9CZM2 204 aaKnown RBP18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Polr2aP08775 1970 aaKnown RBP18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm16381A0A1Y7VKT9 73 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Ly86O88188 162 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Mrpl55Q9CZ83 127 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Brca1P48754 1812 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm6871L7N248 545 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Klf14Q19A41 325 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Usmg5Q78IK2 58 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Card19Q9D1I2 183 aa18.86■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Egr1P08046 533 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Ighv14-1A0A075B5R4 117 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 PolP10400 120 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Defb33Q30KN3 62 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Ighv8-6A0A0A6YXA3 118 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Igkv13-84A0A140T8N3 115 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Xcl1P47993 114 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Mbd6Q3TY92 1003 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 C330021F23RikQ8C7T0 141 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm29666A0A087WQ99 126 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Cd33Q63994 403 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Arid2E9Q7E2 1828 aa18.85■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Tal2Q62282 108 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 MrapQ9D159 127 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Pradc1Q9D9N8 188 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Q8BG31 207 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Tmem219Q9D123 240 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Ighv1-34A0A075B5V2 117 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Myo16Q5DU14 1919 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm11020F6ZGD5 61 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 P0C1Z5 52 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Rpl36aP83882 106 aaKnown RBP18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Frem3Q5H8B9 2123 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm33815A0A087WNV3 176 aa18.84■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 COA4Q8BT51 87 aa18.83■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 4931428L18RikQ9D4S9 127 aa18.83■□□□□ 0.61
Sh3rf1-201ENSMUST00000034060 Gm12169F2Z474 250 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Ttc9cQ810A3 171 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Gm16503Q8C6M9 103 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Atp6v0bQ91V37 205 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 PifoQ9D9W1 207 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Tmem200bD3Z0P8 284 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Ear14F6YUX7 155 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Sigmar1O55242 223 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Foxs1Q61574 329 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Scn2aA0A0J9YTW6 2006 aa18.83■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Gm26727M0QWT1 121 aa18.82■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Trav7-1A0A0G2JEV5 112 aa18.82■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Mrps21P58059 87 aa18.82■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Rpl32-psP17932 135 aa18.82■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Ifi27l2aQ8R412 90 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Csrp2P97314 193 aaKnown RBP18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Znrf2Q71FD5 238 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 HampQ9EQ21 83 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Kiaa0100Q5SYL3 2234 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Pglyrp4Q0VB07 374 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Tex26Q0VB26 296 aa18.81■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Igkv4-80A0A075B5L7 116 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Tmem92B7ZWI3 162 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 PmvkQ9D1G2 192 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Ccl3P10855 92 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Gm43517E9PYS1 339 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 P01811 117 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Cxcl13O55038 109 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 AdmP97297 184 aa18.8■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Trav3-4A0A075B654 114 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Igkv4-70A0A0B4J1I5 116 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Ighv1-26A0A075B5V0 117 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Vdac2Q60930 295 aaKnown RBP18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Znf260Q62513 407 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 4930442H23RikQ9D5G7 103 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Pgpep1lQ9CWB5 130 aa18.79■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 OtosQ8R448 89 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Gm10604Q3V0X7 143 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Spata46Q4FZF2 204 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Pygo1Q9D0P5 417 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Tcf24V9GWT9 166 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Trbv31A0A075B5J5 111 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 C1qtnf5Q8K479 243 aa18.78■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Trav6-4A0A075B6B4 115 aa18.77■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Igkv14-111A0A140T8P9 117 aa18.77■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms