RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PRR4Q16378 134 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 CHCHD10Q8WYQ3 142 aaPredicted RBP5.85□□□□□ -1.47
NECAP1-227ENST00000640648 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 FLNBO75369 2602 aaKnown RBP5.85□□□□□ -1.47
NECAP1-227ENST00000640648 Q8N2B8 174 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 H3BS24 57 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 C1orf137Q5JT78 98 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 C1orf64Q8NEQ6 169 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
NECAP1-227ENST00000640648 UNC80Q8N2C7 3258 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 A0A1W2PPR1 153 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 Q6YL49 198 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 Q9BRP9 147 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 AVPP01185 164 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 REG3AQ06141 175 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 J3QKU1 62 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 LINC00315P59091 139 aa5.84□□□□□ -1.47
NECAP1-227ENST00000640648 COL6A3P12111 3177 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 EGFEM1PQ0D2K5 195 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 WFDC13Q8IUB5 93 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 IGLV1-40P01703 118 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 IGHV4-31P0DP07 118 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 A0A1B0GUV1 79 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 ACYP2P14621 99 aa5.83□□□□□ -1.48
NECAP1-227ENST00000640648 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
NECAP1-227ENST00000640648 SMIM29Q86T20 159 aa5.82□□□□□ -1.48
NECAP1-227ENST00000640648 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
NECAP1-227ENST00000640648 Q75L30 129 aa5.82□□□□□ -1.48
NECAP1-227ENST00000640648 XAGE1AQ9HD64 81 aa5.82□□□□□ -1.48
NECAP1-227ENST00000640648 CHD9Q3L8U1 2897 aa5.82□□□□□ -1.48
NECAP1-227ENST00000640648 SYCNQ0VAF6 134 aa5.81□□□□□ -1.48
NECAP1-227ENST00000640648 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
NECAP1-227ENST00000640648 ZNF702PQ9H963 129 aa5.81□□□□□ -1.48
NECAP1-227ENST00000640648 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
NECAP1-227ENST00000640648 A0A1B0GU69 56 aa5.8□□□□□ -1.48
NECAP1-227ENST00000640648 KLK9Q2XQG4 91 aa5.8□□□□□ -1.48
NECAP1-227ENST00000640648 KPRPQ5T749 579 aaPredicted RBP5.8□□□□□ -1.48
NECAP1-227ENST00000640648 ANKRD17O75179 2603 aaKnown RBP5.8□□□□□ -1.48
NECAP1-227ENST00000640648 COX6A2Q02221 97 aa5.8□□□□□ -1.48
NECAP1-227ENST00000640648 EPG5Q9HCE0 2579 aa5.8□□□□□ -1.48
NECAP1-227ENST00000640648 EYSQ5T1H1 3165 aa5.79□□□□□ -1.48
NECAP1-227ENST00000640648 VCANP13611 3396 aa5.79□□□□□ -1.48
NECAP1-227ENST00000640648 EPM2AB3EWF7 344 aa5.79□□□□□ -1.48
NECAP1-227ENST00000640648 BBC3Q96PG8 261 aaPredicted RBP5.79□□□□□ -1.48
NECAP1-227ENST00000640648 MDFIQ99750 246 aa5.79□□□□□ -1.48
NECAP1-227ENST00000640648 MUC4Q99102 2169 aa5.78□□□□□ -1.48
NECAP1-227ENST00000640648 Q6ZTC4 211 aa5.78□□□□□ -1.48
NECAP1-227ENST00000640648 LINC00588Q9Y4M8 146 aa5.78□□□□□ -1.48
NECAP1-227ENST00000640648 UQCR11O14957 56 aa5.77□□□□□ -1.49
NECAP1-227ENST00000640648 ZNF706Q9Y5V0 76 aaPredicted RBP5.77□□□□□ -1.49
NECAP1-227ENST00000640648 XIRP2A4UGR9 3374 aa5.77□□□□□ -1.49
NECAP1-227ENST00000640648 A0A087X002 238 aa5.77□□□□□ -1.49
NECAP1-227ENST00000640648 ODF3L2Q3SX64 289 aa5.77□□□□□ -1.49
NECAP1-227ENST00000640648 C14orf177Q52M58 125 aa5.76□□□□□ -1.49
NECAP1-227ENST00000640648 Q6ZSN1 163 aa5.76□□□□□ -1.49
NECAP1-227ENST00000640648 COA5Q86WW8 74 aa5.76□□□□□ -1.49
NECAP1-227ENST00000640648 CENPEQ02224 2701 aa5.76□□□□□ -1.49
NECAP1-227ENST00000640648 Q8NBF4 154 aa5.76□□□□□ -1.49
NECAP1-227ENST00000640648 COL4A2P08572 1712 aa5.75□□□□□ -1.49
NECAP1-227ENST00000640648 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
NECAP1-227ENST00000640648 IGKV2-24A0A0C4DH68 120 aa5.74□□□□□ -1.49
NECAP1-227ENST00000640648 LINC01006Q8NI28 216 aa5.74□□□□□ -1.49
NECAP1-227ENST00000640648 IGKV2-28A0A075B6P5 120 aa5.74□□□□□ -1.49
NECAP1-227ENST00000640648 IGKV2D-28P01615 120 aa5.74□□□□□ -1.49
NECAP1-227ENST00000640648 PRR3P79522 188 aaKnown RBP5.74□□□□□ -1.49
NECAP1-227ENST00000640648 LELP1Q5T871 98 aa5.73□□□□□ -1.49
NECAP1-227ENST00000640648 TRANK1O15050 2925 aa5.73□□□□□ -1.49
NECAP1-227ENST00000640648 IGLV4-60A0A075B6I1 120 aa5.73□□□□□ -1.49
NECAP1-227ENST00000640648 TRIOO75962 3097 aa5.73□□□□□ -1.49
NECAP1-227ENST00000640648 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
NECAP1-227ENST00000640648 A0A096LNI7 61 aa5.72□□□□□ -1.49
NECAP1-227ENST00000640648 WDFY4Q6ZS81 3184 aa5.72□□□□□ -1.49
NECAP1-227ENST00000640648 KRTAP10-9P60411 292 aa5.72□□□□□ -1.49
NECAP1-227ENST00000640648 CYSRT1A8MQ03 144 aa5.71□□□□□ -1.49
NECAP1-227ENST00000640648 USP24Q9UPU5 2620 aa5.71□□□□□ -1.5
NECAP1-227ENST00000640648 GVQW2A0A096LPI5 108 aaPredicted RBP5.7□□□□□ -1.5
NECAP1-227ENST00000640648 MOBPQ13875 183 aa5.7□□□□□ -1.5
NECAP1-227ENST00000640648 OXTP01178 125 aa5.7□□□□□ -1.5
NECAP1-227ENST00000640648 PLA2G2AP14555 144 aa5.7□□□□□ -1.5
NECAP1-227ENST00000640648 UNQ6190/PRO20217Q6UXQ8 127 aa5.7□□□□□ -1.5
NECAP1-227ENST00000640648 INAFM1C9JVW0 142 aa5.7□□□□□ -1.5
NECAP1-227ENST00000640648 SPTBN5Q9NRC6 3674 aaKnown RBP5.69□□□□□ -1.5
NECAP1-227ENST00000640648 VPS13AQ96RL7 3174 aa5.69□□□□□ -1.5
NECAP1-227ENST00000640648 C11orf45Q8TAV5 145 aa5.69□□□□□ -1.5
NECAP1-227ENST00000640648 PCSK5Q92824 1860 aa5.69□□□□□ -1.5
NECAP1-227ENST00000640648 F8P00451 2351 aa5.69□□□□□ -1.5
NECAP1-227ENST00000640648 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
NECAP1-227ENST00000640648 IGLV6-57P01721 117 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.68□□□□□ -1.5
NECAP1-227ENST00000640648 C16orf95Q9H693 158 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
NECAP1-227ENST00000640648 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
NECAP1-227ENST00000640648 A0A0J9YWU9 116 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 IGHV4-30-4P0DP06 118 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 MGAQ8IWI9 3026 aa5.68□□□□□ -1.5
NECAP1-227ENST00000640648 MAP1AP78559 2803 aaPredicted RBP5.67□□□□□ -1.5
NECAP1-227ENST00000640648 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
NECAP1-227ENST00000640648 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms