RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 GNG2P59768 71 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 MUSTN1Q8IVN3 82 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 UBE2D4Q9Y2X8 147 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 TENM4Q6N022 2769 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 SSPOA2VEC9 5147 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 GVINP1Q7Z2Y8 2422 aa0.18□□□□□ -2.38
ATM-228ENST00000639240 TMEM131LA2VDJ0 1609 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 K7EP34 96 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 LEPROTL1O95214 131 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 SPRR1BP22528 89 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 C9orf62Q8N4C0 152 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 CHD6Q8TD26 2715 aa0.17□□□□□ -2.38
ATM-228ENST00000639240 MED14O60244 1454 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 ATP7BP35670 1465 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 URB1O60287 2271 aaKnown RBP0.16□□□□□ -2.38
ATM-228ENST00000639240 CELSR1Q9NYQ6 3014 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 PEA15Q15121 130 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 RABAC1Q9UI14 185 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 SCRIBQ14160 1630 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 SUPT6HQ7KZ85 1726 aaKnown RBP0.16□□□□□ -2.38
ATM-228ENST00000639240 TIAM2Q8IVF5 1701 aa0.16□□□□□ -2.38
ATM-228ENST00000639240 UBR5O95071 2799 aaPredicted RBP0.15□□□□□ -2.39
ATM-228ENST00000639240 NEXMIFQ5QGS0 1516 aa0.15□□□□□ -2.39
ATM-228ENST00000639240 NMSQ5H8A3 153 aa0.15□□□□□ -2.39
ATM-228ENST00000639240 PTPN13Q12923 2485 aa0.15□□□□□ -2.39
ATM-228ENST00000639240 ABCA2Q9BZC7 2435 aa0.15□□□□□ -2.39
ATM-228ENST00000639240 RGPD2P0DJD1 1756 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 BCORQ6W2J9 1755 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 UACAQ9BZF9 1416 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 RGPD1P0DJD0 1748 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 IGLC2P0DOY2 106 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 IGLC3P0DOY3 106 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 CRIPTQ9P021 101 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 NEBP20929 6669 aa0.14□□□□□ -2.39
ATM-228ENST00000639240 SPINK4O60575 86 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 SNRPFP62306 86 aaKnown RBP0.13□□□□□ -2.39
ATM-228ENST00000639240 PLGLAQ15195 96 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 S100A16Q96FQ6 103 aaKnown RBP0.13□□□□□ -2.39
ATM-228ENST00000639240 MAGI2Q86UL8 1455 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 PREX1Q8TCU6 1659 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 PKD1L1Q8TDX9 2849 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 CACNA1AO00555 2505 aa0.13□□□□□ -2.39
ATM-228ENST00000639240 POLR1AO95602 1720 aaPredicted RBP0.13□□□□□ -2.39
ATM-228ENST00000639240 I3L3M4 83 aa0.12□□□□□ -2.39
ATM-228ENST00000639240 CYB5AP00167 134 aa0.12□□□□□ -2.39
ATM-228ENST00000639240 DEFB105AQ8NG35 78 aa0.12□□□□□ -2.39
ATM-228ENST00000639240 LRRC7Q96NW7 1537 aa0.12□□□□□ -2.39
ATM-228ENST00000639240 UBR3Q6ZT12 1888 aa0.12□□□□□ -2.39
ATM-228ENST00000639240 RGPD8O14715 1765 aaPredicted RBP0.11□□□□□ -2.39
ATM-228ENST00000639240 LTN1O94822 1766 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 RGPD5Q99666 1765 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 SPTY2D1-AS1A0A0U1RR47 76 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 IQCF6A8MYZ5 107 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 LINC00643Q86TS7 51 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 CLIP1P30622 1438 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 SPTA1P02549 2419 aa0.11□□□□□ -2.39
ATM-228ENST00000639240 ATRQ13535 2644 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 MYMXA0A1B0GTQ4 84 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 A0A1B0GUT8 65 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 CPSF4LA6NMK7 179 aaKnown RBP0.1□□□□□ -2.39
ATM-228ENST00000639240 CCL22O00626 93 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 ACYP1P07311 99 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 DMBT1Q9UGM3 2413 aaPredicted RBP0.1□□□□□ -2.39
ATM-228ENST00000639240 CEP170BQ9Y4F5 1589 aaPredicted RBP0.1□□□□□ -2.39
ATM-228ENST00000639240 CCDC18Q5T9S5 1454 aa0.1□□□□□ -2.39
ATM-228ENST00000639240 TNXBP22105 4242 aa0.09□□□□□ -2.39
ATM-228ENST00000639240 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
ATM-228ENST00000639240 MAGI3Q5TCQ9 1506 aa0.09□□□□□ -2.39
ATM-228ENST00000639240 COL7A1Q02388 2944 aa0.09□□□□□ -2.39
ATM-228ENST00000639240 HUWE1Q7Z6Z7 4374 aaKnown RBP0.09□□□□□ -2.39
ATM-228ENST00000639240 SPRR2DP22532 72 aa0.09□□□□□ -2.4
ATM-228ENST00000639240 DEFB112Q30KQ8 113 aa0.09□□□□□ -2.4
ATM-228ENST00000639240 MRPL34Q9BQ48 92 aaKnown RBP0.09□□□□□ -2.4
ATM-228ENST00000639240 DIP2BQ9P265 1576 aa0.09□□□□□ -2.4
ATM-228ENST00000639240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.08□□□□□ -2.4
ATM-228ENST00000639240 COX7BP24311 80 aa0.08□□□□□ -2.4
ATM-228ENST00000639240 USP32Q8NFA0 1604 aa0.08□□□□□ -2.4
ATM-228ENST00000639240 URB2Q14146 1524 aaKnown RBP0.08□□□□□ -2.4
ATM-228ENST00000639240 DCAF1Q9Y4B6 1507 aa0.08□□□□□ -2.4
ATM-228ENST00000639240 SCN11AQ9UI33 1791 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 PIK3C2BO00750 1634 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 FLNCQ14315 2725 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 KANTRA0A1W2PQU2 76 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 PRM1P04553 51 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 TDRG1Q3Y452 100 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 FXYD6Q9H0Q3 95 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 KDM5DQ9BY66 1539 aa0.07□□□□□ -2.4
ATM-228ENST00000639240 REV3LO60673 3130 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 CCDC88BA6NC98 1476 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 ARHGAP35Q9NRY4 1499 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 APLNQ9ULZ1 77 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 FAT2Q9NYQ8 4349 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 CFAP74Q9C0B2 1584 aa0.06□□□□□ -2.4
ATM-228ENST00000639240 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.05□□□□□ -2.47e-8■■■□□ 16.4
ATM-228ENST00000639240 KMT2AQ03164 3969 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 ZNF831Q5JPB2 1677 aa0.05□□□□□ -2.4
ATM-228ENST00000639240 EP300Q09472 2414 aaPredicted RBP0.05□□□□□ -2.4
ATM-228ENST00000639240 MYCBP2O75592 4640 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms