RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.29
HMHB1-202ENST00000638299 JMJD1CQ15652 2540 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 COX7BP24311 80 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 NREPQ16612 68 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.77□□□□□ -2.29
HMHB1-202ENST00000638299 DIP2AQ14689 1571 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 NESP48681 1621 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 PREX1Q8TCU6 1659 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 LMTK2Q8IWU2 1503 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 COX8AP10176 69 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP21-3Q3LHN1 58 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 LCE1CQ5T751 118 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 LCE1BQ5T7P3 118 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 PRO0255Q9UI72 69 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 FXYD6-FXYD2A0A087WZ82 144 aa0.75□□□□□ -2.29
HMHB1-202ENST00000638299 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
HMHB1-202ENST00000638299 MUC6Q6W4X9 2439 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 K7EQZ3 153 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 ARL14EPLP0DKL9 152 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 COX6A2Q02221 97 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 CNFNQ9BYD5 112 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 NHSQ6T4R5 1651 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 HFM1A2PYH4 1435 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 NDUFB1O75438 58 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 GNG13Q9P2W3 67 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 ABCA6Q8N139 1617 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 GLI2P10070 1586 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 THOC2Q8NI27 1593 aaKnown RBP0.73□□□□□ -2.29
HMHB1-202ENST00000638299 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 TJP1Q07157 1748 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 PLCE1Q9P212 2302 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 BIVM-ERCC5R4GMW8 1640 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 NWD1Q149M9 1564 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 A0A087WWC5 75 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 SPTY2D1-AS1A0A0U1RR47 76 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 LCE6AA0A183 80 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 C3orf79P0CE67 100 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 PIGYQ3MUY2 71 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP5-4Q6L8H1 288 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 DEFB123Q8N688 67 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 ZNF462Q96JM2 2506 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
HMHB1-202ENST00000638299 OTOGLQ3ZCN5 2332 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 TIAM1Q13009 1591 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 ATXN8Q156A1 80 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 Q8IZM0 81 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 DDX60LQ5H9U9 1706 aaKnown RBP0.71□□□□□ -2.3
HMHB1-202ENST00000638299 RALGAPBQ86X10 1494 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 TNRC6CQ9HCJ0 1690 aaKnown RBP0.71□□□□□ -2.3
HMHB1-202ENST00000638299 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 CPSF4LA6NMK7 179 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 NDUFA4O00483 81 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 SFTA3P0C7M3 94 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 ANKRD17O75179 2603 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 HELZ2Q9BYK8 2649 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 ANKRD50Q9ULJ7 1429 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 LELP1Q5T871 98 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 ENHOQ6UWT2 76 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
HMHB1-202ENST00000638299 MROH2AA6NES4 1674 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 PREX2Q70Z35 1606 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 I3L3M4 83 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 USMG5Q96IX5 58 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 KRTAP4-4Q9BYR3 166 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 FRAS1Q86XX4 4008 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 C4AP0C0L4 1744 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 C4BP0C0L5 1744 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 SPRR1AP35321 89 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 KIF1AQ12756 1690 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 ALS2Q96Q42 1657 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 NOTCH2Q04721 2471 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 PLXNC1O60486 1568 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 LINC01549A6NIU2 74 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 COX6B1P14854 86 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 SPRR1BP22528 89 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 RPL38P63173 70 aaKnown RBP0.66□□□□□ -2.3
HMHB1-202ENST00000638299 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 RNF17Q9BXT8 1623 aaKnown RBP0.65□□□□□ -2.31
HMHB1-202ENST00000638299 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
HMHB1-202ENST00000638299 ITSN2Q9NZM3 1697 aa0.65□□□□□ -2.31
HMHB1-202ENST00000638299 OBSCNQ5VST9 7968 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 Q5VSD8 79 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 KRTAP4-3Q9BYR4 195 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 FXYD6Q9H0Q3 95 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PRXQ9BXM0 1461 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 C2CD3Q4AC94 2353 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 ABCC6O95255 1503 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 TTC28Q96AY4 2481 aa0.63□□□□□ -2.31
HMHB1-202ENST00000638299 C3P01024 1663 aa0.63□□□□□ -2.31
HMHB1-202ENST00000638299 PTPRZ1P23471 2315 aaPredicted RBP0.63□□□□□ -2.31
HMHB1-202ENST00000638299 NDUFA3O95167 84 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms