RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.29
HMHB1-202ENST00000638299 JMJD1CQ15652 2540 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 COX7BP24311 80 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 NREPQ16612 68 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.77□□□□□ -2.29
HMHB1-202ENST00000638299 DIP2AQ14689 1571 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 NESP48681 1621 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 PREX1Q8TCU6 1659 aa0.77□□□□□ -2.29
HMHB1-202ENST00000638299 LMTK2Q8IWU2 1503 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 COX8AP10176 69 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP21-3Q3LHN1 58 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 LCE1CQ5T751 118 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 LCE1BQ5T7P3 118 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 PRO0255Q9UI72 69 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
HMHB1-202ENST00000638299 FXYD6-FXYD2A0A087WZ82 144 aa0.75□□□□□ -2.29
HMHB1-202ENST00000638299 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
HMHB1-202ENST00000638299 MUC6Q6W4X9 2439 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 K7EQZ3 153 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 ARL14EPLP0DKL9 152 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 COX6A2Q02221 97 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 CNFNQ9BYD5 112 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 NHSQ6T4R5 1651 aa0.74□□□□□ -2.29
HMHB1-202ENST00000638299 HFM1A2PYH4 1435 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 NDUFB1O75438 58 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 GNG13Q9P2W3 67 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 ABCA6Q8N139 1617 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 GLI2P10070 1586 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 THOC2Q8NI27 1593 aaKnown RBP0.73□□□□□ -2.29
HMHB1-202ENST00000638299 FAM208BQ5VWN6 2430 aa0.73□□□□□ -2.29
HMHB1-202ENST00000638299 TJP1Q07157 1748 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 PLCE1Q9P212 2302 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 BIVM-ERCC5R4GMW8 1640 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 NWD1Q149M9 1564 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 A0A087WWC5 75 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 SPTY2D1-AS1A0A0U1RR47 76 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 LCE6AA0A183 80 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 C3orf79P0CE67 100 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 PIGYQ3MUY2 71 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 KRTAP5-4Q6L8H1 288 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 DEFB123Q8N688 67 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 ZNF462Q96JM2 2506 aa0.72□□□□□ -2.29
HMHB1-202ENST00000638299 GOLGA4Q13439 2230 aaKnown RBP0.72□□□□□ -2.29
HMHB1-202ENST00000638299 OTOGLQ3ZCN5 2332 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 TIAM1Q13009 1591 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 ATXN8Q156A1 80 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 Q8IZM0 81 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 DDX60LQ5H9U9 1706 aaKnown RBP0.71□□□□□ -2.3
HMHB1-202ENST00000638299 RALGAPBQ86X10 1494 aa0.71□□□□□ -2.3
HMHB1-202ENST00000638299 TNRC6CQ9HCJ0 1690 aaKnown RBP0.71□□□□□ -2.3
HMHB1-202ENST00000638299 USF3Q68DE3 2245 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 CPSF4LA6NMK7 179 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 NDUFA4O00483 81 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 SFTA3P0C7M3 94 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 ANKRD17O75179 2603 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 HELZ2Q9BYK8 2649 aaKnown RBP0.7□□□□□ -2.3
HMHB1-202ENST00000638299 ANKRD50Q9ULJ7 1429 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 MEGF8Q7Z7M0 2845 aa0.7□□□□□ -2.3
HMHB1-202ENST00000638299 LELP1Q5T871 98 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 ENHOQ6UWT2 76 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
HMHB1-202ENST00000638299 MROH2AA6NES4 1674 aa0.69□□□□□ -2.3
HMHB1-202ENST00000638299 PREX2Q70Z35 1606 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 I3L3M4 83 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 USMG5Q96IX5 58 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 KRTAP4-4Q9BYR3 166 aa0.68□□□□□ -2.3
HMHB1-202ENST00000638299 FRAS1Q86XX4 4008 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 C4AP0C0L4 1744 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 C4BP0C0L5 1744 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 SPRR1AP35321 89 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 KIF1AQ12756 1690 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 ALS2Q96Q42 1657 aa0.67□□□□□ -2.3
HMHB1-202ENST00000638299 NOTCH2Q04721 2471 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 PLXNC1O60486 1568 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 LINC01549A6NIU2 74 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 COX6B1P14854 86 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 SPRR1BP22528 89 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 RPL38P63173 70 aaKnown RBP0.66□□□□□ -2.3
HMHB1-202ENST00000638299 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 CACNA1EQ15878 2313 aa0.66□□□□□ -2.3
HMHB1-202ENST00000638299 RNF17Q9BXT8 1623 aaKnown RBP0.65□□□□□ -2.31
HMHB1-202ENST00000638299 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
HMHB1-202ENST00000638299 ITSN2Q9NZM3 1697 aa0.65□□□□□ -2.31
HMHB1-202ENST00000638299 OBSCNQ5VST9 7968 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 Q5VSD8 79 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 KRTAP4-3Q9BYR4 195 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 FXYD6Q9H0Q3 95 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 PRXQ9BXM0 1461 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 C2CD3Q4AC94 2353 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 ABCC6O95255 1503 aa0.64□□□□□ -2.31
HMHB1-202ENST00000638299 TTC28Q96AY4 2481 aa0.63□□□□□ -2.31
HMHB1-202ENST00000638299 C3P01024 1663 aa0.63□□□□□ -2.31
HMHB1-202ENST00000638299 PTPRZ1P23471 2315 aaPredicted RBP0.63□□□□□ -2.31
HMHB1-202ENST00000638299 NDUFA3O95167 84 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms