RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
CAPN3-221ENST00000638141 SORL1Q92673 2214 aa8.22□□□□□ -1.09
CAPN3-221ENST00000638141 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
CAPN3-221ENST00000638141 TRBV6-8A0A0A6YYG3 113 aa8.21□□□□□ -1.09
CAPN3-221ENST00000638141 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.09
CAPN3-221ENST00000638141 IGKV4-1P06312 121 aa8.21□□□□□ -1.09
CAPN3-221ENST00000638141 IGLV4-60A0A075B6I1 120 aa8.21□□□□□ -1.1
CAPN3-221ENST00000638141 IGHV4-59P01825 116 aa8.21□□□□□ -1.1
CAPN3-221ENST00000638141 ITPR3Q14573 2671 aa8.2□□□□□ -1.1
CAPN3-221ENST00000638141 IGHV4-30-2A0A087WSY4 118 aa8.2□□□□□ -1.1
CAPN3-221ENST00000638141 IGHV4-28A0A0C4DH34 117 aa8.2□□□□□ -1.1
CAPN3-221ENST00000638141 IGHV4-61A0A0C4DH41 118 aa8.2□□□□□ -1.1
CAPN3-221ENST00000638141 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
CAPN3-221ENST00000638141 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
CAPN3-221ENST00000638141 C10orf99Q6UWK7 81 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-221ENST00000638141 ESM1Q9NQ30 184 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 LYRM9A8MSI8 78 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 MSMBP08118 114 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 COX7BP24311 80 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
CAPN3-221ENST00000638141 Q6ZQY7 126 aa8.18□□□□□ -1.1
CAPN3-221ENST00000638141 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
CAPN3-221ENST00000638141 DEFB113Q30KQ7 82 aa8.18□□□□□ -1.1
CAPN3-221ENST00000638141 C16orf74Q96GX8 76 aa8.18□□□□□ -1.1
CAPN3-221ENST00000638141 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
CAPN3-221ENST00000638141 HIGD2AQ9BW72 106 aa8.17□□□□□ -1.1
CAPN3-221ENST00000638141 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
CAPN3-221ENST00000638141 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
CAPN3-221ENST00000638141 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
CAPN3-221ENST00000638141 FLNAP21333 2647 aaKnown RBP8.16□□□□□ -1.1
CAPN3-221ENST00000638141 ABCA2Q9BZC7 2435 aa8.16□□□□□ -1.1
CAPN3-221ENST00000638141 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
CAPN3-221ENST00000638141 CCL24O00175 119 aa8.15□□□□□ -1.1
CAPN3-221ENST00000638141 SLURP1P55000 103 aa8.15□□□□□ -1.1
CAPN3-221ENST00000638141 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
CAPN3-221ENST00000638141 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
CAPN3-221ENST00000638141 ZCCHC13Q8WW36 166 aaKnown RBP8.15□□□□□ -1.1
CAPN3-221ENST00000638141 RETNQ9HD89 108 aa8.15□□□□□ -1.1
CAPN3-221ENST00000638141 TEP1Q99973 2627 aaKnown RBP8.15□□□□□ -1.1
CAPN3-221ENST00000638141 MRPL55Q7Z7F7 128 aaKnown RBP8.14□□□□□ -1.11
CAPN3-221ENST00000638141 ACANP16112 2415 aa8.14□□□□□ -1.11
CAPN3-221ENST00000638141 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
CAPN3-221ENST00000638141 B4DSR2 109 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 CMC4P56277 68 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-221ENST00000638141 KRTAP1-3Q8IUG1 177 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 C4orf3Q8WVX3 66 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 TRGV2A0A075B6R0 118 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 TRGV4A0A0C4DH28 118 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 DEFB112Q30KQ8 113 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 Q8NDZ9 215 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 NOP10Q9NPE3 64 aaKnown RBP8.13□□□□□ -1.11
CAPN3-221ENST00000638141 CELA1Q9UNI1 258 aa8.13□□□□□ -1.11
CAPN3-221ENST00000638141 UBE2BP63146 152 aa8.12□□□□□ -1.11
CAPN3-221ENST00000638141 KTN1-AS1Q86SY8 53 aa8.12□□□□□ -1.11
CAPN3-221ENST00000638141 HIVEP1P15822 2718 aa8.12□□□□□ -1.11
CAPN3-221ENST00000638141 LINC01006Q8NI28 216 aa8.12□□□□□ -1.11
CAPN3-221ENST00000638141 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
CAPN3-221ENST00000638141 LOC100131303A0A0U1RQF7 123 aa8.11□□□□□ -1.11
CAPN3-221ENST00000638141 IGHV4-30-4P0DP06 118 aa8.11□□□□□ -1.11
CAPN3-221ENST00000638141 DIRC1Q969H9 104 aa8.1□□□□□ -1.11
CAPN3-221ENST00000638141 CSPG4Q6UVK1 2322 aa8.1□□□□□ -1.11
CAPN3-221ENST00000638141 A0A1B0GW54 56 aa8.1□□□□□ -1.11
CAPN3-221ENST00000638141 PSCAO43653 123 aa8.09□□□□□ -1.11
CAPN3-221ENST00000638141 SYCNQ0VAF6 134 aa8.09□□□□□ -1.11
CAPN3-221ENST00000638141 MAPK1IP1LQ8NDC0 245 aa8.09□□□□□ -1.11
CAPN3-221ENST00000638141 LINC00588Q9Y4M8 146 aa8.09□□□□□ -1.11
CAPN3-221ENST00000638141 Q8N9L7 120 aa8.08□□□□□ -1.12
CAPN3-221ENST00000638141 PSPHP1O15172 72 aa8.08□□□□□ -1.12
CAPN3-221ENST00000638141 CR1P17927 2039 aa8.08□□□□□ -1.12
CAPN3-221ENST00000638141 DSCR9P59020 149 aa8.07□□□□□ -1.12
CAPN3-221ENST00000638141 ELOF1P60002 83 aaKnown RBP8.07□□□□□ -1.12
CAPN3-221ENST00000638141 LINC00612Q8N6U2 182 aa8.07□□□□□ -1.12
CAPN3-221ENST00000638141 LINC01356Q8N9X3 169 aa8.07□□□□□ -1.12
CAPN3-221ENST00000638141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.06□□□□□ -1.126e-8■■■■□ 22
CAPN3-221ENST00000638141 DEFB136Q30KP8 78 aa8.06□□□□□ -1.12
CAPN3-221ENST00000638141 UBE2AP49459 152 aa8.06□□□□□ -1.12
CAPN3-221ENST00000638141 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
CAPN3-221ENST00000638141 F8P00451 2351 aa8.06□□□□□ -1.12
CAPN3-221ENST00000638141 A0A0J9YWU9 116 aa8.05□□□□□ -1.12
CAPN3-221ENST00000638141 NDUFS5O43920 106 aa8.05□□□□□ -1.12
CAPN3-221ENST00000638141 Q5VV11 94 aa8.05□□□□□ -1.12
CAPN3-221ENST00000638141 Q6YL49 198 aa8.05□□□□□ -1.12
CAPN3-221ENST00000638141 NDUFB1O75438 58 aa8.05□□□□□ -1.12
CAPN3-221ENST00000638141 HIGD2BQ4VC39 106 aa8.04□□□□□ -1.12
CAPN3-221ENST00000638141 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
CAPN3-221ENST00000638141 SMIM29Q86T20 159 aa8.04□□□□□ -1.12
CAPN3-221ENST00000638141 MTORP42345 2549 aa8.04□□□□□ -1.12
CAPN3-221ENST00000638141 GVQW2A0A096LPI5 108 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-221ENST00000638141 LRCOL1A6NCL2 159 aa8.04□□□□□ -1.12
CAPN3-221ENST00000638141 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
CAPN3-221ENST00000638141 A8MUN3 132 aa8.03□□□□□ -1.12
CAPN3-221ENST00000638141 ZNF73O43830 326 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-221ENST00000638141 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
CAPN3-221ENST00000638141 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-221ENST00000638141 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-221ENST00000638141 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.12
CAPN3-221ENST00000638141 FSHBP01225 129 aa8.02□□□□□ -1.13
CAPN3-221ENST00000638141 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms