RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 NDUFC2O95298 119 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 BAALC-AS2P0C853 105 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 PDE6GP18545 87 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 ATP5EP56381 51 aaPredicted RBP1.97□□□□□ -2.09
CHD2-228ENST00000637613 HIST1H4AP62805 103 aaKnown RBP1.97□□□□□ -2.09
CHD2-228ENST00000637613 FAM229BQ4G0N7 80 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 DEFB121Q5J5C9 76 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 Q6JHZ5 121 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 ANKHD1Q8IWZ3 2542 aaKnown RBP1.97□□□□□ -2.09
CHD2-228ENST00000637613 FREM2Q5SZK8 3169 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 ABCA1O95477 2261 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 ABCA4P78363 2273 aa1.97□□□□□ -2.09
CHD2-228ENST00000637613 EYSQ5T1H1 3165 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 NCOR1O75376 2440 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 KNCNA6PVL3 124 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
CHD2-228ENST00000637613 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 LINC00526Q96FQ7 95 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
CHD2-228ENST00000637613 DSCR8Q96T75 97 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 PKIGQ9Y2B9 76 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 APC2O95996 2303 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 CEP250Q9BV73 2442 aa1.96□□□□□ -2.1
CHD2-228ENST00000637613 ROS1P08922 2347 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 CACNA1BQ00975 2339 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 IGKV3OR2-268A0A0C4DH90 116 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 TRBV6-4A0A1B0GX49 114 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 CCDC179H3BU77 68 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 PSCAO43653 123 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 NDUFC1O43677 76 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 CRYGAP11844 174 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 BLCAPP62952 87 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 COX17Q14061 63 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 SERP2Q8N6R1 65 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 DEFB104AQ8WTQ1 72 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 LAMTOR3Q9UHA4 124 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 USP34Q70CQ2 3546 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 TRIOO75962 3097 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 OTOGLQ3ZCN5 2332 aa1.95□□□□□ -2.1
CHD2-228ENST00000637613 PRUNE2Q8WUY3 3088 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 TRBV10-3A0A0K0K1G6 114 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 FAM236DA0A1B0GTK5 79 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 A8MTW9 85 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 BCE1O60756 84 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 FAM236CP0DP71 79 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 DEFB1P60022 68 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 C14orf132Q9NPU4 83 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 COL6A6A6NMZ7 2263 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 SPTBN5Q9NRC6 3674 aaKnown RBP1.94□□□□□ -2.1
CHD2-228ENST00000637613 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
CHD2-228ENST00000637613 SPEGQ15772 3267 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 CNOT1A5YKK6 2376 aaKnown RBP1.93□□□□□ -2.1
CHD2-228ENST00000637613 MED13LQ71F56 2210 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.93□□□□□ -2.13e-8■■■■■ 31.7
CHD2-228ENST00000637613 TRBV6-8A0A0A6YYG3 113 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 A0A1W2PNM2 257 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 CCKP06307 115 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
CHD2-228ENST00000637613 RBM3P98179 157 aaKnown RBP1.93□□□□□ -2.1
CHD2-228ENST00000637613 Q8IZM0 81 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 SMIM11BQ8TCY0 68 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 SMCR5Q8TEV8 140 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 DIRC1Q969H9 104 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 TM2D3Q9BRN9 247 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 NOP10Q9NPE3 64 aaKnown RBP1.93□□□□□ -2.1
CHD2-228ENST00000637613 CDC42SE2Q9NRR3 84 aa1.93□□□□□ -2.1
CHD2-228ENST00000637613 MAP1BP46821 2468 aaKnown RBP1.93□□□□□ -2.1
CHD2-228ENST00000637613 PTPRZ1P23471 2315 aaPredicted RBP1.92□□□□□ -2.1
CHD2-228ENST00000637613 VPS13AQ96RL7 3174 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 MYO15AQ9UKN7 3530 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 IGKV3D-7A0A0C4DH55 119 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 A0A1W2PNN7 141 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
CHD2-228ENST00000637613 XCL1P47992 114 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 DEFB136Q30KP8 78 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 DEFB114Q30KQ6 69 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 C5orf38Q86SI9 138 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 Q8N2B8 174 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 PRO0255Q9UI72 69 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 SPTBN1Q01082 2364 aaKnown RBP1.92□□□□□ -2.1
CHD2-228ENST00000637613 PIEZO2Q9H5I5 2752 aa1.92□□□□□ -2.1
CHD2-228ENST00000637613 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 COL6A3P12111 3177 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 DOPEY2Q9Y3R5 2298 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 TRAV7A0A075B6U4 112 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 LINC00694P0DN24 101 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
CHD2-228ENST00000637613 COX6A2Q02221 97 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 SPAG11BQ08648 103 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 DEFB113Q30KQ7 82 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 Q6ZTI0 123 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 Q8N814 137 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 XAGE1AQ9HD64 81 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 SERP1Q9Y6X1 66 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 SPTA1P02549 2419 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 PTPRQQ9UMZ3 2332 aa1.91□□□□□ -2.1
CHD2-228ENST00000637613 CR1P17927 2039 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms