RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 Q6ZQT0 140 aa1.35□□□□□ -2.19
SCN8A-210ENST00000627665 ODF3Q96PU9 254 aa1.35□□□□□ -2.19
SCN8A-210ENST00000627665 TMEM126AQ9H061 195 aa1.35□□□□□ -2.19
SCN8A-210ENST00000627665 ATG5Q9H1Y0 275 aa1.35□□□□□ -2.19
SCN8A-210ENST00000627665 A0A087WWC5 75 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 A0A087WX48 190 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 EFCAB10A6NFE3 127 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 LYRM1O43325 122 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 NBEAP1P0C6P0 100 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 TMBIM6P55061 237 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 MT1HP80294 61 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 COX6A2Q02221 97 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 SURF2Q15527 256 aaPredicted RBP1.34□□□□□ -2.19
SCN8A-210ENST00000627665 SOSTDC1Q6X4U4 206 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 PRR15Q8IV56 129 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 RNASE11Q8TAA1 199 aaKnown RBP1.34□□□□□ -2.19
SCN8A-210ENST00000627665 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
SCN8A-210ENST00000627665 BORCS7-ASMTA0A0B4J1R7 106 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 LOC100130705A0A1B0GUX0 176 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 TRBV6-4A0A1B0GX49 114 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 TRDV1A0A1B0GX56 115 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 CEBPZOSA8MTT3 80 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 J3KT08 172 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 M0R2P5 195 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 M0R2T5 61 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 MT-ND6P03923 174 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP10-10P60014 251 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 LSM3P62310 102 aaKnown RBP1.33□□□□□ -2.2
SCN8A-210ENST00000627665 HBBP68871 147 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 DIRC1Q969H9 104 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 TRGV9Q99603 122 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 RETNLBQ9BQ08 111 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 FAM107BQ9H098 131 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 FXYD6Q9H0Q3 95 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 AP4S1Q9Y587 144 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 USH2AO75445 5202 aa1.33□□□□□ -2.2
SCN8A-210ENST00000627665 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 IFITM5A6NNB3 132 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 TMEM262E9PQX1 116 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 PDCD5O14737 125 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
SCN8A-210ENST00000627665 S100A11P31949 105 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 SDC2P34741 201 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 RPS28P62857 69 aaKnown RBP1.32□□□□□ -2.2
SCN8A-210ENST00000627665 Q1T7F1 81 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 ASB16-AS1Q495Z4 193 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 NMSQ5H8A3 153 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 TMEM91Q6ZNR0 172 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 COA5Q86WW8 74 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 SFT2D1Q8WV19 159 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 LINC00474Q9P2X8 69 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 NAT8BQ9UHF3 227 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 HIGD1AQ9Y241 93 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 U3KQ87 197 aa1.32□□□□□ -2.2
SCN8A-210ENST00000627665 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
SCN8A-210ENST00000627665 A0A096LNI7 61 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 HYPMO75409 117 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 IL5P05113 134 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 NMBP08949 121 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 CXCL1P09341 107 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 LINC00694P0DN24 101 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 FABP2P12104 132 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 RAB5CP51148 216 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 S100A12P80511 92 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 SMCO1Q147U7 214 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 RNASE10Q5GAN6 216 aaKnown RBP1.31□□□□□ -2.2
SCN8A-210ENST00000627665 CFAP126Q5VTH2 177 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 CLPSL2Q6UWE3 100 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 PHF5AQ7RTV0 110 aaKnown RBP1.31□□□□□ -2.2
SCN8A-210ENST00000627665 TP53RKQ96S44 253 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 AGPAT4-IT1Q9H0P7 198 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 CACFD1Q9UGQ2 172 aa1.31□□□□□ -2.2
SCN8A-210ENST00000627665 PAIP2BQ9ULR5 123 aaKnown RBP1.31□□□□□ -2.2
SCN8A-210ENST00000627665 TRAV1-2A0A0B4J238 106 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 TRAV12-1A0A0B4J245 112 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 IGHV1-58A0A0C4DH39 117 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 TRBV6-5A0A0K0K1A5 114 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 C3orf85A0A1B0GTC6 90 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 M0R3E3 92 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 PKIAP61925 76 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 MRPS36P82909 103 aaKnown RBP1.3□□□□□ -2.2
SCN8A-210ENST00000627665 KRTAP19-2Q3LHN2 52 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 CYP2G1PQ6ZSU1 146 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 FP248Q71RG6 208 aaPredicted RBP1.3□□□□□ -2.2
SCN8A-210ENST00000627665 LINC00305Q7Z4B0 112 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 TMEM229BQ8NBD8 167 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 CHCHD1Q96BP2 118 aaKnown RBP1.3□□□□□ -2.2
SCN8A-210ENST00000627665 NAA38Q9BRA0 125 aaKnown RBP1.3□□□□□ -2.2
SCN8A-210ENST00000627665 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 COPZ2Q9P299 210 aa1.3□□□□□ -2.2
SCN8A-210ENST00000627665 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
SCN8A-210ENST00000627665 A0A1B0GX51 115 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms