RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
MSH6-215ENST00000622629 A0A087WVE0 104 aa8.95□□□□□ -0.98
MSH6-215ENST00000622629 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
MSH6-215ENST00000622629 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 C20orf197Q8N268 126 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 Q8N3U1 123 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 Q8N814 137 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 CRYBG3Q68DQ2 2970 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 USP17L23D6RBM5 183 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 C3orf22Q8N5N4 141 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 CELA1Q9UNI1 258 aa8.94□□□□□ -0.98
MSH6-215ENST00000622629 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
MSH6-215ENST00000622629 PDE6GP18545 87 aa8.93□□□□□ -0.98
MSH6-215ENST00000622629 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
MSH6-215ENST00000622629 Q6ZTC4 211 aa8.92□□□□□ -0.98
MSH6-215ENST00000622629 TRBV10-3A0A0K0K1G6 114 aa8.92□□□□□ -0.98
MSH6-215ENST00000622629 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
MSH6-215ENST00000622629 X6R8D5 127 aa8.92□□□□□ -0.98
MSH6-215ENST00000622629 H3BQ85 93 aa8.91□□□□□ -0.98
MSH6-215ENST00000622629 HRNRQ86YZ3 2850 aaPredicted RBP8.91□□□□□ -0.98
MSH6-215ENST00000622629 ZNF73O43830 326 aaPredicted RBP8.91□□□□□ -0.98
MSH6-215ENST00000622629 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
MSH6-215ENST00000622629 UBR5O95071 2799 aaPredicted RBP8.91□□□□□ -0.98
MSH6-215ENST00000622629 A0A0J9YWU9 116 aa8.91□□□□□ -0.98
MSH6-215ENST00000622629 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
MSH6-215ENST00000622629 LINC00846Q9NV44 126 aa8.9□□□□□ -0.98
MSH6-215ENST00000622629 GIG44P09565 113 aaPredicted RBP8.9□□□□□ -0.98
MSH6-215ENST00000622629 WFDC10BQ8IUB3 73 aa8.9□□□□□ -0.98
MSH6-215ENST00000622629 SETXQ7Z333 2677 aaKnown RBP8.9□□□□□ -0.98
MSH6-215ENST00000622629 CCKP06307 115 aa8.89□□□□□ -0.99
MSH6-215ENST00000622629 PMAIP1Q13794 54 aa8.89□□□□□ -0.99
MSH6-215ENST00000622629 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
MSH6-215ENST00000622629 C3orf84H3BNL1 204 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 M0R378 163 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 COX7CP15954 63 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 SMG1Q96Q15 3661 aaKnown RBP8.87□□□□□ -0.99
MSH6-215ENST00000622629 HIGD2AQ9BW72 106 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 RPL37AP8A6NKH3 93 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 Q6JHZ5 121 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 SERP2Q8N6R1 65 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 CSNK1G2-AS1Q8NCQ2 148 aa8.87□□□□□ -0.99
MSH6-215ENST00000622629 BPY2O14599 106 aa8.86□□□□□ -0.99
MSH6-215ENST00000622629 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
MSH6-215ENST00000622629 PLAC8L1A1L4L8 177 aa8.85□□□□□ -0.99
MSH6-215ENST00000622629 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
MSH6-215ENST00000622629 STAB1Q9NY15 2570 aa8.84□□□□□ -0.99
MSH6-215ENST00000622629 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
MSH6-215ENST00000622629 COL6A5A8TX70 2615 aa8.84□□□□□ -0.99
MSH6-215ENST00000622629 CELSR2Q9HCU4 2923 aa8.84□□□□□ -0.99
MSH6-215ENST00000622629 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.84□□□□□ -0.99
MSH6-215ENST00000622629 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -0.99
MSH6-215ENST00000622629 MUC7Q8TAX7 377 aa8.83□□□□□ -1
MSH6-215ENST00000622629 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
MSH6-215ENST00000622629 TRAV10A0A0B4J240 114 aa8.82□□□□□ -1
MSH6-215ENST00000622629 LINC00575Q6W349 94 aa8.82□□□□□ -1
MSH6-215ENST00000622629 NOTCH1P46531 2555 aa8.82□□□□□ -1
MSH6-215ENST00000622629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
MSH6-215ENST00000622629 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
MSH6-215ENST00000622629 FAM104AQ969W3 186 aa8.82□□□□□ -1
MSH6-215ENST00000622629 A0A096LNI7 61 aa8.82□□□□□ -1
MSH6-215ENST00000622629 APCP25054 2843 aa8.81□□□□□ -1
MSH6-215ENST00000622629 Q6ZRU5 148 aa8.81□□□□□ -1
MSH6-215ENST00000622629 LINC01561Q8N1V8 128 aa8.81□□□□□ -1
MSH6-215ENST00000622629 CDK2AP2O75956 126 aa8.8□□□□□ -1
MSH6-215ENST00000622629 NF1P21359 2839 aa8.79□□□□□ -1
MSH6-215ENST00000622629 KRTAP1-1Q07627 177 aa8.79□□□□□ -1
MSH6-215ENST00000622629 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
MSH6-215ENST00000622629 H3BS24 57 aa8.79□□□□□ -1
MSH6-215ENST00000622629 SNURFQ9Y675 71 aa8.79□□□□□ -1
MSH6-215ENST00000622629 CR1P17927 2039 aa8.79□□□□□ -1
MSH6-215ENST00000622629 NDUFC2-KCTD14E9PQ53 114 aa8.79□□□□□ -1
MSH6-215ENST00000622629 UBE2AP49459 152 aa8.79□□□□□ -1
MSH6-215ENST00000622629 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
MSH6-215ENST00000622629 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
MSH6-215ENST00000622629 Q8NAQ8 132 aa8.78□□□□□ -1
MSH6-215ENST00000622629 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
MSH6-215ENST00000622629 KRTAP10-3P60369 221 aa8.76□□□□□ -1.01
MSH6-215ENST00000622629 ESRGQ1W209 222 aa8.75□□□□□ -1.01
MSH6-215ENST00000622629 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
MSH6-215ENST00000622629 FBN2P35556 2912 aa8.75□□□□□ -1.01
MSH6-215ENST00000622629 WIPF1O43516 503 aa8.74□□□□□ -1.01
MSH6-215ENST00000622629 Q6ZVQ6 151 aa8.73□□□□□ -1.01
MSH6-215ENST00000622629 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
MSH6-215ENST00000622629 HIVEP1P15822 2718 aa8.72□□□□□ -1.01
MSH6-215ENST00000622629 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.01
MSH6-215ENST00000622629 KIAA0087Q14695 138 aa8.71□□□□□ -1.02
MSH6-215ENST00000622629 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
MSH6-215ENST00000622629 SPATA3Q8NHX4 192 aa8.7□□□□□ -1.02
MSH6-215ENST00000622629 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
MSH6-215ENST00000622629 NBEAL1Q6ZS30 2694 aa8.69□□□□□ -1.02
MSH6-215ENST00000622629 NDUFS5O43920 106 aa8.69□□□□□ -1.02
MSH6-215ENST00000622629 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
MSH6-215ENST00000622629 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
MSH6-215ENST00000622629 MP68P56378 58 aa8.68□□□□□ -1.02
MSH6-215ENST00000622629 Q8N9L7 120 aa8.68□□□□□ -1.02
MSH6-215ENST00000622629 H0Y9J4 135 aa8.68□□□□□ -1.02
MSH6-215ENST00000622629 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms