RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 HERC2O95714 4834 aa8.23□□□□□ -1.09
TNFAIP3-211ENST00000621150 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
TNFAIP3-211ENST00000621150 APOMO95445 188 aa8.22□□□□□ -1.09
TNFAIP3-211ENST00000621150 ERG28Q9UKR5 140 aa8.22□□□□□ -1.09
TNFAIP3-211ENST00000621150 PKD1P98161 4303 aa8.22□□□□□ -1.09
TNFAIP3-211ENST00000621150 KIAA1109Q2LD37 5005 aa8.22□□□□□ -1.09
TNFAIP3-211ENST00000621150 TSPAN13O95857 204 aa8.21□□□□□ -1.09
TNFAIP3-211ENST00000621150 SPAG11BQ08648 103 aa8.21□□□□□ -1.09
TNFAIP3-211ENST00000621150 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.09
TNFAIP3-211ENST00000621150 NPC2P61916 151 aa8.21□□□□□ -1.1
TNFAIP3-211ENST00000621150 C15orf56Q8N910 161 aa8.21□□□□□ -1.1
TNFAIP3-211ENST00000621150 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
TNFAIP3-211ENST00000621150 PRO1854Q9UHT4 67 aa8.21□□□□□ -1.1
TNFAIP3-211ENST00000621150 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
TNFAIP3-211ENST00000621150 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
TNFAIP3-211ENST00000621150 VAMP3Q15836 100 aa8.2□□□□□ -1.1
TNFAIP3-211ENST00000621150 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
TNFAIP3-211ENST00000621150 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
TNFAIP3-211ENST00000621150 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
TNFAIP3-211ENST00000621150 CKS1BP61024 79 aa8.19□□□□□ -1.1
TNFAIP3-211ENST00000621150 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
TNFAIP3-211ENST00000621150 COPS9Q8WXC6 57 aa8.19□□□□□ -1.1
TNFAIP3-211ENST00000621150 K7EP34 96 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 LINC00158P58513 81 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 COX17Q14061 63 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 FABP2P12104 132 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 KRTAP1-5Q9BYS1 174 aa8.18□□□□□ -1.1
TNFAIP3-211ENST00000621150 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
TNFAIP3-211ENST00000621150 M0R2N4 97 aa8.17□□□□□ -1.1
TNFAIP3-211ENST00000621150 PFN2P35080 140 aa8.17□□□□□ -1.1
TNFAIP3-211ENST00000621150 LINC00336Q6ZUF6 198 aa8.17□□□□□ -1.1
TNFAIP3-211ENST00000621150 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
TNFAIP3-211ENST00000621150 IGKV2-28A0A075B6P5 120 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 IGKV2D-28P01615 120 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 Q9HAA7 133 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
TNFAIP3-211ENST00000621150 RTL8CO15255 209 aa8.14□□□□□ -1.11
TNFAIP3-211ENST00000621150 A0A1B0GVY2 172 aa8.14□□□□□ -1.11
TNFAIP3-211ENST00000621150 HIGD2BQ4VC39 106 aa8.14□□□□□ -1.11
TNFAIP3-211ENST00000621150 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
TNFAIP3-211ENST00000621150 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
TNFAIP3-211ENST00000621150 Q6ZR54 194 aa8.13□□□□□ -1.11
TNFAIP3-211ENST00000621150 GTF2H5Q6ZYL4 71 aa8.13□□□□□ -1.11
TNFAIP3-211ENST00000621150 LINC00337Q8N6G1 96 aa8.12□□□□□ -1.11
TNFAIP3-211ENST00000621150 RMI2Q96E14 147 aa8.12□□□□□ -1.11
TNFAIP3-211ENST00000621150 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
TNFAIP3-211ENST00000621150 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 Q6ZRU5 148 aa8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 NDUFC2O95298 119 aa8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 Q8NDZ9 215 aa8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
TNFAIP3-211ENST00000621150 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
TNFAIP3-211ENST00000621150 SLPIP03973 132 aa8.09□□□□□ -1.11
TNFAIP3-211ENST00000621150 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
TNFAIP3-211ENST00000621150 H7C2G1 150 aa8.08□□□□□ -1.12
TNFAIP3-211ENST00000621150 TCL1BO95988 128 aa8.08□□□□□ -1.12
TNFAIP3-211ENST00000621150 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
TNFAIP3-211ENST00000621150 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 SYCNQ0VAF6 134 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 PRO0461Q9UI25 63 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 H3BMG7 143 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 Q1RN00 199 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
TNFAIP3-211ENST00000621150 RYR1P21817 5038 aa8.06□□□□□ -1.12
TNFAIP3-211ENST00000621150 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
TNFAIP3-211ENST00000621150 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
TNFAIP3-211ENST00000621150 WFDC2Q14508 124 aa8.06□□□□□ -1.12
TNFAIP3-211ENST00000621150 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
TNFAIP3-211ENST00000621150 PSMB2P49721 201 aa8.05□□□□□ -1.12
TNFAIP3-211ENST00000621150 TTC32Q5I0X7 151 aa8.05□□□□□ -1.12
TNFAIP3-211ENST00000621150 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
TNFAIP3-211ENST00000621150 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 Q6ZRP5 223 aa8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
TNFAIP3-211ENST00000621150 TRBV10-2A0A0K0K1G8 114 aa8.02□□□□□ -1.13
TNFAIP3-211ENST00000621150 F8W1H4 67 aa8.02□□□□□ -1.13
TNFAIP3-211ENST00000621150 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
TNFAIP3-211ENST00000621150 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
TNFAIP3-211ENST00000621150 LST1O00453 97 aa8.01□□□□□ -1.13
TNFAIP3-211ENST00000621150 LECT2O14960 151 aa8.01□□□□□ -1.13
TNFAIP3-211ENST00000621150 COX6CP09669 75 aa8.01□□□□□ -1.13
TNFAIP3-211ENST00000621150 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
TNFAIP3-211ENST00000621150 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
TNFAIP3-211ENST00000621150 ATXN8Q156A1 80 aa8□□□□□ -1.13
TNFAIP3-211ENST00000621150 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
TNFAIP3-211ENST00000621150 CLEC2BQ92478 149 aa8□□□□□ -1.13
TNFAIP3-211ENST00000621150 IGLV6-57P01721 117 aa8□□□□□ -1.13
TNFAIP3-211ENST00000621150 TMEM126AQ9H061 195 aa8□□□□□ -1.13
TNFAIP3-211ENST00000621150 HSPG2P98160 4391 aa7.99□□□□□ -1.13
TNFAIP3-211ENST00000621150 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms