RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SNHG12Q9BXW3 62 aa3.11□□□□□ -1.91
VPS29-212ENST00000621131 RETNQ9HD89 108 aa3.11□□□□□ -1.91
VPS29-212ENST00000621131 STARD9Q9P2P6 4700 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 DEFB131BA0A096LNP1 70 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 A0A096LPF7 62 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 TRAV10A0A0B4J240 114 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 IGHV1-58A0A0C4DH39 117 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 CRPP02741 224 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 CIRBPQ14011 172 aaKnown RBP3.1□□□□□ -1.91
VPS29-212ENST00000621131 C12orf74Q32Q52 190 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 KPRPQ5T749 579 aaPredicted RBP3.1□□□□□ -1.91
VPS29-212ENST00000621131 LELP1Q5T871 98 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 C15orf53Q8NAA6 179 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
VPS29-212ENST00000621131 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 IGHV3-64A0A075B6Q5 118 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 K7EIL1 84 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 ZNF861PO60384 105 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 ANGP03950 147 aaKnown RBP3.09□□□□□ -1.91
VPS29-212ENST00000621131 SPINK8P0C7L1 97 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 SMIM13P0DJ93 91 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 IGHV3-30-3P0DP02 117 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 RBX1P62877 108 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 HERV-K104P63124 156 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 C2orf91Q6ZV80 131 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 TM2D3Q9BRN9 247 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 SPANXB1Q9NS25 103 aaPredicted RBP3.09□□□□□ -1.91
VPS29-212ENST00000621131 NDUFA12Q9UI09 145 aa3.09□□□□□ -1.91
VPS29-212ENST00000621131 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
VPS29-212ENST00000621131 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
VPS29-212ENST00000621131 LINC00959A0A1B0GUT2 108 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 NDUFA1O15239 70 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 APOMO95445 188 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 LYRM7Q5U5X0 104 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 ZFAND6Q6FIF0 208 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 LINC01561Q8N1V8 128 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 COX7B2Q8TF08 81 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 TP73-AS1Q9UF72 201 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 CDKN2A-AS1Q9UH64 79 aa3.08□□□□□ -1.92
VPS29-212ENST00000621131 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 ALMS1Q8TCU4 4167 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 IGLV4-60A0A075B6I1 120 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 A0A1B0GV90 55 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 COX7A2LO14548 114 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 TIMM17BO60830 172 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 IFITM1P13164 125 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 CXCL5P42830 114 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 CCL18P55774 89 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 REG3AQ06141 175 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 MEIG1Q5JSS6 88 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 LYPD5Q6UWN5 251 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 GTF2H5Q6ZYL4 71 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 RAB37Q96AX2 223 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 B9D2Q9BPU9 175 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 TTTY13Q9BZ97 58 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 NHP2Q9NX24 153 aaKnown RBP3.07□□□□□ -1.92
VPS29-212ENST00000621131 TOMM7Q9P0U1 55 aa3.07□□□□□ -1.92
VPS29-212ENST00000621131 IGLV8-61A0A075B6I0 122 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 TRAV8-4A0A0B4J246 113 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 XCL1P47992 114 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 TSPEAR-AS2P59090 65 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 CKS1BP61024 79 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 VAMP3Q15836 100 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 MIAQ16674 131 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 C6orf226Q5I0X4 101 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 CLPSL2Q6UWE3 100 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 CD164L2Q6UWJ8 174 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 DNAH10Q8IVF4 4471 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 LINC00269Q8N2A0 174 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 Q8N9L7 120 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
VPS29-212ENST00000621131 RMI2Q96E14 147 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 SPANXDQ9BXN6 97 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 SPANXCQ9NY87 97 aa3.06□□□□□ -1.92
VPS29-212ENST00000621131 IGHV3-30P01768 117 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 IGHV3-33P01772 117 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 IGHV3-30-5P0DP03 117 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 FABP2P12104 132 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 COX6A2Q02221 97 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 C5orf38Q86SI9 138 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 UBE2DNLQ8IWF7 75 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 Q8IZM0 81 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 C10orf126Q8N4M7 172 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 KLK12Q9UKR0 248 aa3.05□□□□□ -1.92
VPS29-212ENST00000621131 KLK5Q9Y337 293 aaPredicted RBP3.05□□□□□ -1.92
VPS29-212ENST00000621131 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 A0A0B4J2C4 111 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 NUPR2A6NF83 97 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 IGLL5B9A064 214 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 H3BUT2 72 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 TAX1BP3O14907 124 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 FXYD2P54710 66 aa3.04□□□□□ -1.92
VPS29-212ENST00000621131 LINC01556Q5JQF7 62 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms