RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SAMD9Q5K651 1589 aa0.15□□□□□ -2.39
TARDBP-220ENST00000618606 SPTBN1Q01082 2364 aaKnown RBP0.14□□□□□ -2.39
TARDBP-220ENST00000618606 USF3Q68DE3 2245 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 KMT2CQ8NEZ4 4911 aaKnown RBP0.14□□□□□ -2.39
TARDBP-220ENST00000618606 CUX1P39880 1505 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 MAST4O15021 2626 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 FMN2Q9NZ56 1722 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 URB1O60287 2271 aaKnown RBP0.14□□□□□ -2.39
TARDBP-220ENST00000618606 CPSF4LA6NMK7 179 aaKnown RBP0.14□□□□□ -2.39
TARDBP-220ENST00000618606 SMIM11AP58511 58 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 NMSQ5H8A3 153 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 DEFB105AQ8NG35 78 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 UBE2D4Q9Y2X8 147 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 PLIN4Q96Q06 1357 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 C5P01031 1676 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 IGSF10Q6WRI0 2623 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 VWFP04275 2813 aa0.14□□□□□ -2.39
TARDBP-220ENST00000618606 RYR1P21817 5038 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 UBR1Q8IWV7 1749 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 KIAA1551Q9HCM1 1747 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 GOLGA4Q13439 2230 aaKnown RBP0.13□□□□□ -2.39
TARDBP-220ENST00000618606 GVINP1Q7Z2Y8 2422 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 COX8AP10176 69 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 HRNRQ86YZ3 2850 aaPredicted RBP0.13□□□□□ -2.39
TARDBP-220ENST00000618606 FLNAP21333 2647 aaKnown RBP0.13□□□□□ -2.39
TARDBP-220ENST00000618606 PLCE1Q9P212 2302 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 DNAJC13O75165 2243 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 MYO3AQ8NEV4 1616 aa0.13□□□□□ -2.39
TARDBP-220ENST00000618606 TENM4Q6N022 2769 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 ACACBO00763 2458 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 RYR2Q92736 4967 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 FASNP49327 2511 aaKnown RBP0.12□□□□□ -2.39
TARDBP-220ENST00000618606 NKTRP30414 1462 aaKnown RBP0.12□□□□□ -2.39
TARDBP-220ENST00000618606 IQSEC2Q5JU85 1478 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 SPTA1P02549 2419 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 I3L3M4 83 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 PRM1P04553 51 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 TSC2P49815 1807 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 NCOR2Q9Y618 2525 aa0.12□□□□□ -2.39
TARDBP-220ENST00000618606 RGPD4Q7Z3J3 1758 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 CRYBG1Q9Y4K1 1723 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 SONP18583 2426 aaKnown RBP0.11□□□□□ -2.39
TARDBP-220ENST00000618606 MYMXA0A1B0GTQ4 84 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 A0A1B0GUT8 65 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 SNRPFP62306 86 aaKnown RBP0.11□□□□□ -2.39
TARDBP-220ENST00000618606 PLGLAQ15195 96 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 H1FX-AS1Q4G0G2 97 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 LELP1Q5T871 98 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 LINC00643Q86TS7 51 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 ABCC3O15438 1527 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 HUWE1Q7Z6Z7 4374 aaKnown RBP0.11□□□□□ -2.39
TARDBP-220ENST00000618606 CHD6Q8TD26 2715 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 MYCBP2O75592 4640 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 HECTD1Q9ULT8 2610 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 PKDREJQ9NTG1 2253 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 CREBBPQ92793 2442 aa0.11□□□□□ -2.39
TARDBP-220ENST00000618606 STAB2Q8WWQ8 2551 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 CHD8Q9HCK8 2581 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 FAT2Q9NYQ8 4349 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 HIVEP1P15822 2718 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 RNF213Q63HN8 5207 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 DOPEY2Q9Y3R5 2298 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 WNK2Q9Y3S1 2297 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 SPTY2D1-AS1A0A0U1RR47 76 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 MRPL34Q9BQ48 92 aaKnown RBP0.1□□□□□ -2.39
TARDBP-220ENST00000618606 COL12A1Q99715 3063 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 MYH4Q9Y623 1939 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 ABCA13Q86UQ4 5058 aa0.1□□□□□ -2.39
TARDBP-220ENST00000618606 ACANP16112 2415 aa0.09□□□□□ -2.39
TARDBP-220ENST00000618606 HERC1Q15751 4861 aa0.09□□□□□ -2.39
TARDBP-220ENST00000618606 RGPD3A6NKT7 1758 aaPredicted RBP0.09□□□□□ -2.39
TARDBP-220ENST00000618606 DOPEY1Q5JWR5 2465 aa0.09□□□□□ -2.39
TARDBP-220ENST00000618606 HYDINQ4G0P3 5121 aa0.09□□□□□ -2.39
TARDBP-220ENST00000618606 GAFA1Q96PS6 74 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 FLNCQ14315 2725 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 LRRC37AA6NMS7 1700 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 EPPK1P58107 5090 aaKnown RBP0.09□□□□□ -2.4
TARDBP-220ENST00000618606 MED14O60244 1454 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 ATP7BP35670 1465 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 CCDC141Q6ZP82 1450 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 MAGI2Q86UL8 1455 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 WNK1Q9H4A3 2382 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.4
TARDBP-220ENST00000618606 PDZD2O15018 2839 aa0.09□□□□□ -2.4
TARDBP-220ENST00000618606 LRRC7Q96NW7 1537 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 ATRQ13535 2644 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 CCDC168Q8NDH2 2452 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 CNOT1A5YKK6 2376 aaKnown RBP0.08□□□□□ -2.4
TARDBP-220ENST00000618606 LAMA3Q16787 3333 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 UACAQ9BZF9 1416 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 TRAV21A0A0B4J279 112 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 CEBPZOSA8MTT3 80 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 SPINK4O60575 86 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 COX7BP24311 80 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 RABAC1Q9UI14 185 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 ANKRD36A6QL64 1941 aa0.08□□□□□ -2.4
TARDBP-220ENST00000618606 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms