RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 C8orf17Q9NRJ1 99 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 TNP2Q05952 138 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 NDUFV3P56181 108 aaKnown RBP2.26□□□□□ -2.05
LPP-220ENST00000617246 GPR179Q6PRD1 2367 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 DEFB1P60022 68 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 LOC101927531A0A1B0GV80 90 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 CNBPP62633 177 aaKnown RBP2.26□□□□□ -2.05
LPP-220ENST00000617246 C2orf91Q6ZV80 131 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 CDKN2A-AS1Q9UH64 79 aa2.26□□□□□ -2.05
LPP-220ENST00000617246 A0A087WSZ3 146 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 C9orf92A6NGG3 77 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 K7EP34 96 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 NCOR2Q9Y618 2525 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 HCG22E2RYF7 251 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 FAM19A4Q96LR4 140 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 PTPN13Q12923 2485 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 LINC00526Q96FQ7 95 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 LINC00612Q8N6U2 182 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 SPG11Q96JI7 2443 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 Q8N1X5 172 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 H0Y9P7 68 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 PATE2Q6UY27 113 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 SCXQ7RTU7 201 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 CD164Q04900 197 aa2.25□□□□□ -2.05
LPP-220ENST00000617246 PRR3P79522 188 aaKnown RBP2.24□□□□□ -2.05
LPP-220ENST00000617246 A8MUN3 132 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 LINC00308Q8TCZ7 52 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 UNQ6190/PRO20217Q6UXQ8 127 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 SMIM26A0A096LP01 95 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 TRAV22A0A0B4J277 110 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 RPS28P62857 69 aaKnown RBP2.24□□□□□ -2.05
LPP-220ENST00000617246 TRBV10-3A0A0K0K1G6 114 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 COX8AP10176 69 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 SOSTDC1Q6X4U4 206 aa2.24□□□□□ -2.05
LPP-220ENST00000617246 POLQO75417 2590 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 TLX1NBP0CAT3 122 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 KRTAP1-3Q8IUG1 177 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 H3BPC8 53 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 C4orf26Q17RF5 130 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 SRCAPQ6ZRS2 3230 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 CCDC179H3BU77 68 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 LINC00694P0DN24 101 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 C11orf72Q8NBR9 251 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 CACNA1AO00555 2505 aa2.23□□□□□ -2.05
LPP-220ENST00000617246 PKD1L2Q7Z442 2459 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 BDP1A6H8Y1 2624 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 SPTBN4Q9H254 2564 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 Q6ZRX8 168 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 ST20-AS1Q8NBB2 130 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 ELOF1P60002 83 aaKnown RBP2.22□□□□□ -2.05
LPP-220ENST00000617246 HIGD1BQ9P298 99 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 WDR87Q6ZQQ6 2873 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 CYYR1Q96J86 154 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 IGLV5-39A0A0G2JS06 123 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 ACANP16112 2415 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 A0A1B0GU69 56 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 SMIM1B2RUZ4 78 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 KRTAP1-1Q07627 177 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 CRIP3Q6Q6R5 217 aa2.22□□□□□ -2.05
LPP-220ENST00000617246 SETD2Q9BYW2 2564 aaPredicted RBP2.22□□□□□ -2.05
LPP-220ENST00000617246 ZFYVE26Q68DK2 2539 aa2.21□□□□□ -2.05
LPP-220ENST00000617246 ZNF80P51504 273 aaPredicted RBP2.21□□□□□ -2.05
LPP-220ENST00000617246 A0A096LNT2 108 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 MRPL34Q9BQ48 92 aaKnown RBP2.21□□□□□ -2.06
LPP-220ENST00000617246 ACACBO00763 2458 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 A0A1W2PPM0 123 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 FAM167A-AS1Q96KT0 104 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 C6orf48Q9UBA6 75 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 CCDC168Q8NDH2 2452 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 LINC00242Q5T6M2 205 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 PRR15Q8IV56 129 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 S4R3F8 94 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 TLN1Q9Y490 2541 aaKnown RBP2.21□□□□□ -2.06
LPP-220ENST00000617246 LINC00310P59036 64 aa2.21□□□□□ -2.06
LPP-220ENST00000617246 ERC2-IT1O76042 136 aa2.2□□□□□ -2.06
LPP-220ENST00000617246 F8P00451 2351 aa2.2□□□□□ -2.06
LPP-220ENST00000617246 LITAFQ99732 161 aa2.2□□□□□ -2.06
LPP-220ENST00000617246 SMIM11BQ8TCY0 68 aa2.19□□□□□ -2.06
LPP-220ENST00000617246 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
LPP-220ENST00000617246 UQCRQO14949 82 aa2.19□□□□□ -2.06
LPP-220ENST00000617246 IGLV8-61A0A075B6I0 122 aa2.19□□□□□ -2.06
LPP-220ENST00000617246 FN1P02751 2386 aaKnown RBP2.19□□□□□ -2.06
LPP-220ENST00000617246 CNFNQ9BYD5 112 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 EIF4EBP3O60516 100 aaPredicted RBP2.18□□□□□ -2.06
LPP-220ENST00000617246 POLR2KP53803 58 aaKnown RBP2.18□□□□□ -2.06
LPP-220ENST00000617246 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 KRTAP10-3P60369 221 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 OBSCN-AS1Q96MR7 158 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 LINC00208Q96KT6 92 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 K7ERJ3 54 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 R4GN34 69 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 ENHOQ6UWT2 76 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 PLAC8Q9NZF1 115 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 PRR9Q5T870 116 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
LPP-220ENST00000617246 SPRR4Q96PI1 79 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms