RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 ZNF843Q8N446 348 aa9.28□□□□□ -0.92
PCDHA11-202ENST00000616325 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
PCDHA11-202ENST00000616325 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
PCDHA11-202ENST00000616325 A0A087WZ39 114 aa9.27□□□□□ -0.92
PCDHA11-202ENST00000616325 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.92
PCDHA11-202ENST00000616325 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.92
PCDHA11-202ENST00000616325 C16orf74Q96GX8 76 aa9.27□□□□□ -0.92
PCDHA11-202ENST00000616325 LINC00482Q8N8I6 264 aa9.27□□□□□ -0.93
PCDHA11-202ENST00000616325 F8P00451 2351 aa9.27□□□□□ -0.93
PCDHA11-202ENST00000616325 Q6ZVQ6 151 aa9.27□□□□□ -0.93
PCDHA11-202ENST00000616325 SMIM26A0A096LP01 95 aa9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 TRBV7-6A0A0J9YX20 115 aa9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 ANGP03950 147 aaKnown RBP9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 Q8N9L7 120 aa9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 Q6ZQY7 126 aa9.26□□□□□ -0.93
PCDHA11-202ENST00000616325 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
PCDHA11-202ENST00000616325 FAM19A3Q7Z5A8 133 aa9.25□□□□□ -0.93
PCDHA11-202ENST00000616325 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
PCDHA11-202ENST00000616325 NANOS2P60321 138 aaKnown RBP9.24□□□□□ -0.93
PCDHA11-202ENST00000616325 LINC01006Q8NI28 216 aa9.24□□□□□ -0.93
PCDHA11-202ENST00000616325 PLAC8L1A1L4L8 177 aa9.24□□□□□ -0.93
PCDHA11-202ENST00000616325 FSHBP01225 129 aa9.24□□□□□ -0.93
PCDHA11-202ENST00000616325 PRB2P02812 416 aaPredicted RBP9.24□□□□□ -0.93
PCDHA11-202ENST00000616325 HIVEP1P15822 2718 aa9.23□□□□□ -0.93
PCDHA11-202ENST00000616325 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
PCDHA11-202ENST00000616325 Q6ZQT0 140 aa9.22□□□□□ -0.93
PCDHA11-202ENST00000616325 SMR3AQ99954 134 aa9.22□□□□□ -0.93
PCDHA11-202ENST00000616325 PDZD2O15018 2839 aa9.21□□□□□ -0.93
PCDHA11-202ENST00000616325 MIFP14174 115 aa9.21□□□□□ -0.94
PCDHA11-202ENST00000616325 TENM1Q9UKZ4 2725 aa9.21□□□□□ -0.94
PCDHA11-202ENST00000616325 TENM4Q6N022 2769 aa9.2□□□□□ -0.94
PCDHA11-202ENST00000616325 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
PCDHA11-202ENST00000616325 C6orf223Q8N319 242 aa9.19□□□□□ -0.94
PCDHA11-202ENST00000616325 LY6G6DO95868 133 aa9.19□□□□□ -0.94
PCDHA11-202ENST00000616325 C1orf195Q5TG92 126 aa9.19□□□□□ -0.94
PCDHA11-202ENST00000616325 LINC00575Q6W349 94 aa9.19□□□□□ -0.94
PCDHA11-202ENST00000616325 TRBV10-3A0A0K0K1G6 114 aa9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 Q8NDZ9 215 aa9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 XAGE1AQ9HD64 81 aa9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.18□□□□□ -0.94
PCDHA11-202ENST00000616325 NREPQ16612 68 aa9.17□□□□□ -0.94
PCDHA11-202ENST00000616325 FAM229BQ4G0N7 80 aa9.17□□□□□ -0.94
PCDHA11-202ENST00000616325 UNQ6190/PRO20217Q6UXQ8 127 aa9.17□□□□□ -0.94
PCDHA11-202ENST00000616325 PKD1L1Q8TDX9 2849 aa9.16□□□□□ -0.94
PCDHA11-202ENST00000616325 BPY2O14599 106 aa9.16□□□□□ -0.94
PCDHA11-202ENST00000616325 CHCHD10Q8WYQ3 142 aaPredicted RBP9.16□□□□□ -0.94
PCDHA11-202ENST00000616325 TMEM254Q8TBM7 123 aa9.15□□□□□ -0.94
PCDHA11-202ENST00000616325 Q8IZM0 81 aa9.15□□□□□ -0.94
PCDHA11-202ENST00000616325 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
PCDHA11-202ENST00000616325 IGLV1-51P01701 117 aa9.15□□□□□ -0.95
PCDHA11-202ENST00000616325 V9GYY9 64 aa9.15□□□□□ -0.95
PCDHA11-202ENST00000616325 IGHV4-28A0A0C4DH34 117 aa9.14□□□□□ -0.95
PCDHA11-202ENST00000616325 C10orf25Q5T742 122 aa9.14□□□□□ -0.95
PCDHA11-202ENST00000616325 MUC7Q8TAX7 377 aa9.14□□□□□ -0.95
PCDHA11-202ENST00000616325 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
PCDHA11-202ENST00000616325 KLK12Q9UKR0 248 aa9.14□□□□□ -0.95
PCDHA11-202ENST00000616325 REG3AQ06141 175 aa9.13□□□□□ -0.95
PCDHA11-202ENST00000616325 C3orf84H3BNL1 204 aa9.13□□□□□ -0.95
PCDHA11-202ENST00000616325 LINC00167Q96N53 147 aa9.13□□□□□ -0.95
PCDHA11-202ENST00000616325 C19orf73Q9NVV2 129 aa9.13□□□□□ -0.95
PCDHA11-202ENST00000616325 CELA1Q9UNI1 258 aa9.13□□□□□ -0.95
PCDHA11-202ENST00000616325 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
PCDHA11-202ENST00000616325 PRR4Q16378 134 aa9.12□□□□□ -0.95
PCDHA11-202ENST00000616325 DEFB105AQ8NG35 78 aa9.12□□□□□ -0.95
PCDHA11-202ENST00000616325 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
PCDHA11-202ENST00000616325 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
PCDHA11-202ENST00000616325 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCDHA11-202ENST00000616325 KRTAP1-3Q8IUG1 177 aa9.11□□□□□ -0.95
PCDHA11-202ENST00000616325 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
PCDHA11-202ENST00000616325 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
PCDHA11-202ENST00000616325 SEC61GP60059 68 aa9.1□□□□□ -0.95
PCDHA11-202ENST00000616325 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
PCDHA11-202ENST00000616325 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
PCDHA11-202ENST00000616325 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
PCDHA11-202ENST00000616325 NDUFC1O43677 76 aa9.08□□□□□ -0.96
PCDHA11-202ENST00000616325 FAM30AQ9NZY2 134 aa9.08□□□□□ -0.96
PCDHA11-202ENST00000616325 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
PCDHA11-202ENST00000616325 CXCL6P80162 114 aa9.07□□□□□ -0.96
PCDHA11-202ENST00000616325 CMC4P56277 68 aaPredicted RBP9.07□□□□□ -0.96
PCDHA11-202ENST00000616325 KIAA0087Q14695 138 aa9.07□□□□□ -0.96
PCDHA11-202ENST00000616325 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
PCDHA11-202ENST00000616325 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
PCDHA11-202ENST00000616325 CD164L2Q6UWJ8 174 aa9.06□□□□□ -0.96
PCDHA11-202ENST00000616325 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
PCDHA11-202ENST00000616325 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
PCDHA11-202ENST00000616325 PRYO14603 147 aa9.05□□□□□ -0.96
PCDHA11-202ENST00000616325 PSPHP1O15172 72 aa9.05□□□□□ -0.96
PCDHA11-202ENST00000616325 X6R8D5 127 aa9.05□□□□□ -0.96
PCDHA11-202ENST00000616325 PDE6GP18545 87 aa9.04□□□□□ -0.96
PCDHA11-202ENST00000616325 COX7BP24311 80 aa9.04□□□□□ -0.96
PCDHA11-202ENST00000616325 ESRGQ1W209 222 aa9.04□□□□□ -0.96
PCDHA11-202ENST00000616325 NBEAL1Q6ZS30 2694 aa9.04□□□□□ -0.96
PCDHA11-202ENST00000616325 MAST4O15021 2626 aa9.04□□□□□ -0.96
PCDHA11-202ENST00000616325 COX17Q14061 63 aa9.03□□□□□ -0.96
PCDHA11-202ENST00000616325 BCE1O60756 84 aa9.03□□□□□ -0.96
PCDHA11-202ENST00000616325 ZNF73O43830 326 aaPredicted RBP9.02□□□□□ -0.96
PCDHA11-202ENST00000616325 F8WDY8 70 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms