RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 DEFB114Q30KQ6 69 aa6.12□□□□□ -1.43
LINC00547-201ENST00000612438 Q6ZTI0 123 aa6.12□□□□□ -1.43
LINC00547-201ENST00000612438 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
LINC00547-201ENST00000612438 TRBV10-1A0A0K0K1A3 114 aa6.11□□□□□ -1.43
LINC00547-201ENST00000612438 LRCOL1A6NCL2 159 aa6.11□□□□□ -1.43
LINC00547-201ENST00000612438 TRGV1A0A0A0MS02 117 aa6.11□□□□□ -1.43
LINC00547-201ENST00000612438 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
LINC00547-201ENST00000612438 A0A096LNT2 108 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 K7EQD1 137 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 NIPBLQ6KC79 2804 aaeCLIP6.1□□□□□ -1.43
LINC00547-201ENST00000612438 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 ZNF73O43830 326 aaPredicted RBP6.1□□□□□ -1.43
LINC00547-201ENST00000612438 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 BPY2O14599 106 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 FSHBP01225 129 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
LINC00547-201ENST00000612438 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
LINC00547-201ENST00000612438 ODF3L2Q3SX64 289 aa6.08□□□□□ -1.44
LINC00547-201ENST00000612438 PHF5AQ7RTV0 110 aaKnown RBP6.08□□□□□ -1.44
LINC00547-201ENST00000612438 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
LINC00547-201ENST00000612438 TEP1Q99973 2627 aaKnown RBP6.08□□□□□ -1.44
LINC00547-201ENST00000612438 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 UBE2AP49459 152 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 LINC00269Q8N2A0 174 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 RNASE1P07998 156 aaKnown RBP6.07□□□□□ -1.44
LINC00547-201ENST00000612438 KHDC1LQ5JSQ8 128 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 Q6ZQT0 140 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 SPTSSBQ8NFR3 76 aa6.07□□□□□ -1.44
LINC00547-201ENST00000612438 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
LINC00547-201ENST00000612438 ATP11AUNQ6ZP68 121 aa6.06□□□□□ -1.44
LINC00547-201ENST00000612438 C11orf44Q8N8P7 122 aa6.06□□□□□ -1.44
LINC00547-201ENST00000612438 Q8N814 137 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 LOC110117498A0A087WWA1 95 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 A8MUN3 132 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 LINC00158P58513 81 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 CCL18P55774 89 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 CD164L2Q6UWJ8 174 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 NOP10Q9NPE3 64 aaKnown RBP6.05□□□□□ -1.44
LINC00547-201ENST00000612438 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
LINC00547-201ENST00000612438 IGHV4-31P0DP07 118 aa6.04□□□□□ -1.44
LINC00547-201ENST00000612438 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
LINC00547-201ENST00000612438 C2CD3Q4AC94 2353 aa6.04□□□□□ -1.44
LINC00547-201ENST00000612438 A8MU10 97 aa6.04□□□□□ -1.44
LINC00547-201ENST00000612438 LOC100131303A0A0U1RQF7 123 aa6.04□□□□□ -1.44
LINC00547-201ENST00000612438 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
LINC00547-201ENST00000612438 C16orf90A8MZG2 172 aa6.03□□□□□ -1.44
LINC00547-201ENST00000612438 PDE6GP18545 87 aa6.03□□□□□ -1.44
LINC00547-201ENST00000612438 LCA10Q71F78 164 aa6.03□□□□□ -1.44
LINC00547-201ENST00000612438 IGLV4-60A0A075B6I1 120 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 IGKV3OR2-268A0A0C4DH90 116 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 TRBV6-4A0A1B0GX49 114 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 CHKB-CPT1BH3BT56 60 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 SETXQ7Z333 2677 aaKnown RBP6.02□□□□□ -1.45
LINC00547-201ENST00000612438 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
LINC00547-201ENST00000612438 OCR1Q9BZK8 76 aa6.02□□□□□ -1.45
LINC00547-201ENST00000612438 OTOGQ6ZRI0 2925 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 TRGV2A0A075B6R0 118 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 Q5VV11 94 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 HCG22E2RYF7 251 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 C16orf74Q96GX8 76 aa6.01□□□□□ -1.45
LINC00547-201ENST00000612438 A6NN06 94 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 PSCAO43653 123 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 LY6G6DO95868 133 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 TRBV6-8A0A0A6YYG3 113 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 TRGV4A0A0C4DH28 118 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 DEFB113Q30KQ7 82 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 SMR3AQ99954 134 aa6□□□□□ -1.45
LINC00547-201ENST00000612438 KMT2BQ9UMN6 2715 aaPredicted RBP6□□□□□ -1.45
LINC00547-201ENST00000612438 VPREB1P12018 145 aa5.99□□□□□ -1.45
LINC00547-201ENST00000612438 M0R2N4 97 aa5.99□□□□□ -1.45
LINC00547-201ENST00000612438 CCL24O00175 119 aa5.99□□□□□ -1.45
LINC00547-201ENST00000612438 PDZD2O15018 2839 aa5.98□□□□□ -1.45
LINC00547-201ENST00000612438 PRR26Q8N8Z3 221 aa5.98□□□□□ -1.45
LINC00547-201ENST00000612438 LINC00959A0A1B0GUT2 108 aa5.98□□□□□ -1.45
LINC00547-201ENST00000612438 PLA2G2AP14555 144 aa5.98□□□□□ -1.45
LINC00547-201ENST00000612438 CMC4P56277 68 aaPredicted RBP5.98□□□□□ -1.45
LINC00547-201ENST00000612438 ATRQ13535 2644 aa5.98□□□□□ -1.45
LINC00547-201ENST00000612438 J3QKU1 62 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 CR1P17927 2039 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 C9orf66Q5T8R8 295 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 LIMD2Q9BT23 127 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 NKAPP1Q8N9T2 125 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 CSNK1G2-AS1Q8NCQ2 148 aa5.97□□□□□ -1.45
LINC00547-201ENST00000612438 F8P00451 2351 aa5.96□□□□□ -1.46
LINC00547-201ENST00000612438 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
LINC00547-201ENST00000612438 WFDC10AQ9H1F0 79 aa5.96□□□□□ -1.46
LINC00547-201ENST00000612438 C19orf73Q9NVV2 129 aa5.95□□□□□ -1.46
LINC00547-201ENST00000612438 HIVEP1P15822 2718 aa5.95□□□□□ -1.46
LINC00547-201ENST00000612438 NANOS2P60321 138 aaKnown RBP5.95□□□□□ -1.46
LINC00547-201ENST00000612438 SPATA3Q8NHX4 192 aa5.95□□□□□ -1.46
LINC00547-201ENST00000612438 Q8IZM0 81 aa5.94□□□□□ -1.46
LINC00547-201ENST00000612438 NBEAL2Q6ZNJ1 2754 aa5.94□□□□□ -1.46
LINC00547-201ENST00000612438 H3BQ85 93 aa5.94□□□□□ -1.46
LINC00547-201ENST00000612438 MUC7Q8TAX7 377 aa5.94□□□□□ -1.46
LINC00547-201ENST00000612438 AKAP9Q99996 3911 aa5.93□□□□□ -1.46
LINC00547-201ENST00000612438 A6NED7 52 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms