RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 KIAA0087Q14695 138 aa11.12□□□□□ -0.63
PDE4C-208ENST00000595343 LBHQ53QV2 105 aaPredicted RBP11.12□□□□□ -0.63
PDE4C-208ENST00000595343 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
PDE4C-208ENST00000595343 C14orf144Q96I85 54 aa11.12□□□□□ -0.63
PDE4C-208ENST00000595343 DLEU1O43261 78 aa11.11□□□□□ -0.63
PDE4C-208ENST00000595343 COX8AP10176 69 aa11.11□□□□□ -0.63
PDE4C-208ENST00000595343 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
PDE4C-208ENST00000595343 TRBV30A0A0K0K1B3 111 aa11.09□□□□□ -0.63
PDE4C-208ENST00000595343 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
PDE4C-208ENST00000595343 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
PDE4C-208ENST00000595343 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
PDE4C-208ENST00000595343 KRTAP9-2Q9BYQ4 174 aa11.09□□□□□ -0.63
PDE4C-208ENST00000595343 CST9LQ9H4G1 147 aa11.09□□□□□ -0.63
PDE4C-208ENST00000595343 C2orf82Q6UX34 121 aa11.08□□□□□ -0.64
PDE4C-208ENST00000595343 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
PDE4C-208ENST00000595343 M0R143 59 aa11.07□□□□□ -0.64
PDE4C-208ENST00000595343 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
PDE4C-208ENST00000595343 ZNF861PO60384 105 aa11.06□□□□□ -0.64
PDE4C-208ENST00000595343 LINC00242Q5T6M2 205 aa11.06□□□□□ -0.64
PDE4C-208ENST00000595343 BOD1L2Q8IYS8 172 aa11.06□□□□□ -0.64
PDE4C-208ENST00000595343 AMELXQ99217 191 aa11.06□□□□□ -0.64
PDE4C-208ENST00000595343 VCX2Q9H322 139 aa11.05□□□□□ -0.64
PDE4C-208ENST00000595343 TSPAN13O95857 204 aa11.04□□□□□ -0.64
PDE4C-208ENST00000595343 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
PDE4C-208ENST00000595343 CTAG1AP78358 180 aa11.03□□□□□ -0.64
PDE4C-208ENST00000595343 HERVK_113P61574 105 aa11.02□□□□□ -0.65
PDE4C-208ENST00000595343 C2orf88Q9BSF0 95 aa11.02□□□□□ -0.65
PDE4C-208ENST00000595343 E9PLD3 99 aa11.01□□□□□ -0.65
PDE4C-208ENST00000595343 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
PDE4C-208ENST00000595343 NMUP48645 174 aa11□□□□□ -0.65
PDE4C-208ENST00000595343 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
PDE4C-208ENST00000595343 HIGD1BQ9P298 99 aa11□□□□□ -0.65
PDE4C-208ENST00000595343 C22orf24Q9Y442 160 aa11□□□□□ -0.65
PDE4C-208ENST00000595343 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
PDE4C-208ENST00000595343 IGKV2D-26A0A0A0MRZ7 120 aa10.98□□□□□ -0.65
PDE4C-208ENST00000595343 LCE2AQ5TA79 106 aaPredicted RBP10.98□□□□□ -0.65
PDE4C-208ENST00000595343 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
PDE4C-208ENST00000595343 FAM19A3Q7Z5A8 133 aa10.98□□□□□ -0.65
PDE4C-208ENST00000595343 A0A087X002 238 aa10.97□□□□□ -0.65
PDE4C-208ENST00000595343 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
PDE4C-208ENST00000595343 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
PDE4C-208ENST00000595343 FAT4Q6V0I7 4981 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 PRSS2P07478 247 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 CKS1BP61024 79 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 SEC11AP67812 179 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
PDE4C-208ENST00000595343 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
PDE4C-208ENST00000595343 CRYGAP11844 174 aa10.94□□□□□ -0.66
PDE4C-208ENST00000595343 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
PDE4C-208ENST00000595343 RPL28P46779 137 aaKnown RBP10.94□□□□□ -0.66
PDE4C-208ENST00000595343 HSD52Q0P140 79 aa10.94□□□□□ -0.66
PDE4C-208ENST00000595343 C6orf226Q5I0X4 101 aa10.94□□□□□ -0.66
PDE4C-208ENST00000595343 TYMSOSQ8TAI1 123 aa10.94□□□□□ -0.66
PDE4C-208ENST00000595343 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
PDE4C-208ENST00000595343 TMEM223A0PJW6 202 aa10.93□□□□□ -0.66
PDE4C-208ENST00000595343 COL5A1-AS1Q5SY13 56 aa10.93□□□□□ -0.66
PDE4C-208ENST00000595343 Q8IZM0 81 aa10.93□□□□□ -0.66
PDE4C-208ENST00000595343 MYMXA0A1B0GTQ4 84 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 BCE1O60756 84 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 HERVK_113P63121 156 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 TAL2Q16559 108 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
PDE4C-208ENST00000595343 PLEKHB2Q96CS7 222 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
PDE4C-208ENST00000595343 LEPROTO15243 131 aa10.91□□□□□ -0.66
PDE4C-208ENST00000595343 H3BRM9 83 aa10.9□□□□□ -0.66
PDE4C-208ENST00000595343 HINT1P49773 126 aaPredicted RBP10.9□□□□□ -0.66
PDE4C-208ENST00000595343 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
PDE4C-208ENST00000595343 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
PDE4C-208ENST00000595343 J3QQQ9 107 aa10.88□□□□□ -0.67
PDE4C-208ENST00000595343 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
PDE4C-208ENST00000595343 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
PDE4C-208ENST00000595343 BATFQ16520 125 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 LINC00167Q96N53 147 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
PDE4C-208ENST00000595343 RPL37AP8A6NKH3 93 aa10.86□□□□□ -0.67
PDE4C-208ENST00000595343 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
PDE4C-208ENST00000595343 KRTAP9-6A0A140TA67 174 aa10.85□□□□□ -0.67
PDE4C-208ENST00000595343 A6NDN8 102 aa10.84□□□□□ -0.67
PDE4C-208ENST00000595343 TSPEAR-AS2P59090 65 aa10.83□□□□□ -0.68
PDE4C-208ENST00000595343 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
PDE4C-208ENST00000595343 IGLV5-39A0A0G2JS06 123 aa10.82□□□□□ -0.68
PDE4C-208ENST00000595343 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
PDE4C-208ENST00000595343 CXCL5P42830 114 aa10.82□□□□□ -0.68
PDE4C-208ENST00000595343 SCGB1D4Q6XE38 83 aa10.82□□□□□ -0.68
PDE4C-208ENST00000595343 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
PDE4C-208ENST00000595343 CEND1Q8N111 149 aa10.81□□□□□ -0.68
PDE4C-208ENST00000595343 LINC00304Q8N9R0 145 aa10.81□□□□□ -0.68
PDE4C-208ENST00000595343 CDIP1Q9H305 208 aa10.81□□□□□ -0.68
PDE4C-208ENST00000595343 UBE2AP49459 152 aa10.8□□□□□ -0.68
PDE4C-208ENST00000595343 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
PDE4C-208ENST00000595343 FAM229BQ4G0N7 80 aa10.8□□□□□ -0.68
PDE4C-208ENST00000595343 A0A1B0GV90 55 aa10.79□□□□□ -0.68
PDE4C-208ENST00000595343 HIST1H4GQ99525 98 aa10.79□□□□□ -0.68
PDE4C-208ENST00000595343 MUC17Q685J3 4493 aa10.78□□□□□ -0.68
PDE4C-208ENST00000595343 IGLV5-37A0A075B6J1 123 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms