RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
SMARCA4-217ENST00000591595 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
SMARCA4-217ENST00000591595 TRGV2A0A075B6R0 118 aa8.47□□□□□ -1.05
SMARCA4-217ENST00000591595 K7EQD1 137 aa8.47□□□□□ -1.05
SMARCA4-217ENST00000591595 M0R2N4 97 aa8.47□□□□□ -1.05
SMARCA4-217ENST00000591595 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
SMARCA4-217ENST00000591595 IGHV4-31P0DP07 118 aa8.46□□□□□ -1.05
SMARCA4-217ENST00000591595 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.05
SMARCA4-217ENST00000591595 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.05
SMARCA4-217ENST00000591595 NOP10Q9NPE3 64 aaKnown RBP8.46□□□□□ -1.05
SMARCA4-217ENST00000591595 A8MTW9 85 aa8.46□□□□□ -1.06
SMARCA4-217ENST00000591595 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
SMARCA4-217ENST00000591595 Q8N814 137 aa8.45□□□□□ -1.06
SMARCA4-217ENST00000591595 FBN2P35556 2912 aa8.45□□□□□ -1.06
SMARCA4-217ENST00000591595 UBE2AP49459 152 aa8.45□□□□□ -1.06
SMARCA4-217ENST00000591595 CCL18P55774 89 aa8.44□□□□□ -1.06
SMARCA4-217ENST00000591595 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
SMARCA4-217ENST00000591595 A0A096LNT2 108 aa8.44□□□□□ -1.06
SMARCA4-217ENST00000591595 FN1P02751 2386 aaKnown RBP8.44□□□□□ -1.06
SMARCA4-217ENST00000591595 Q5VV11 94 aa8.44□□□□□ -1.06
SMARCA4-217ENST00000591595 LINC00158P58513 81 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 OCR1Q9BZK8 76 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 MTORP42345 2549 aa8.43□□□□□ -1.06
SMARCA4-217ENST00000591595 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
SMARCA4-217ENST00000591595 NF1P21359 2839 aa8.42□□□□□ -1.06
SMARCA4-217ENST00000591595 TRGV4A0A0C4DH28 118 aa8.42□□□□□ -1.06
SMARCA4-217ENST00000591595 KRTAP10-9P60411 292 aa8.42□□□□□ -1.06
SMARCA4-217ENST00000591595 ATP11AUNQ6ZP68 121 aa8.42□□□□□ -1.06
SMARCA4-217ENST00000591595 CHKB-CPT1BH3BT56 60 aa8.41□□□□□ -1.06
SMARCA4-217ENST00000591595 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
SMARCA4-217ENST00000591595 A6NN06 94 aa8.41□□□□□ -1.06
SMARCA4-217ENST00000591595 FSHBP01225 129 aa8.41□□□□□ -1.06
SMARCA4-217ENST00000591595 CCL24O00175 119 aa8.4□□□□□ -1.06
SMARCA4-217ENST00000591595 PSCAO43653 123 aa8.4□□□□□ -1.06
SMARCA4-217ENST00000591595 C7orf65Q6ZTY9 151 aa8.4□□□□□ -1.06
SMARCA4-217ENST00000591595 HCG22E2RYF7 251 aa8.4□□□□□ -1.07
SMARCA4-217ENST00000591595 DIRC1Q969H9 104 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 WFDC10AQ9H1F0 79 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 LY6G6DO95868 133 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 LCA10Q71F78 164 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
SMARCA4-217ENST00000591595 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
SMARCA4-217ENST00000591595 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
SMARCA4-217ENST00000591595 ACANP16112 2415 aa8.38□□□□□ -1.07
SMARCA4-217ENST00000591595 DEFB113Q30KQ7 82 aa8.37□□□□□ -1.07
SMARCA4-217ENST00000591595 PLA2G2AP14555 144 aa8.36□□□□□ -1.07
SMARCA4-217ENST00000591595 NIPBLQ6KC79 2804 aaeCLIP8.36□□□□□ -1.076e-6■□□□□ 9.3
SMARCA4-217ENST00000591595 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
SMARCA4-217ENST00000591595 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
SMARCA4-217ENST00000591595 Q8N9L7 120 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 DEFB130BP0DP73 79 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 DEFB130AP0DP74 79 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 PDE6GP18545 87 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 C16orf74Q96GX8 76 aa8.35□□□□□ -1.07
SMARCA4-217ENST00000591595 DNAJC9-AS1A6NH13 148 aa8.34□□□□□ -1.07
SMARCA4-217ENST00000591595 PRB2P02812 416 aaPredicted RBP8.34□□□□□ -1.07
SMARCA4-217ENST00000591595 FLNAP21333 2647 aaKnown RBP8.33□□□□□ -1.08
SMARCA4-217ENST00000591595 C9orf66Q5T8R8 295 aa8.33□□□□□ -1.08
SMARCA4-217ENST00000591595 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
SMARCA4-217ENST00000591595 PRR4Q16378 134 aa8.32□□□□□ -1.08
SMARCA4-217ENST00000591595 CLPSL2Q6UWE3 100 aa8.32□□□□□ -1.08
SMARCA4-217ENST00000591595 SPATA3Q8NHX4 192 aa8.32□□□□□ -1.08
SMARCA4-217ENST00000591595 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
SMARCA4-217ENST00000591595 IGKV4-1P06312 121 aa8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 SETXQ7Z333 2677 aaKnown RBP8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 CR1P17927 2039 aa8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 MUC7Q8TAX7 377 aa8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 MDFIQ99750 246 aa8.31□□□□□ -1.08
SMARCA4-217ENST00000591595 A0A096LPF7 62 aa8.3□□□□□ -1.08
SMARCA4-217ENST00000591595 CYP4F30PQ9H0H9 118 aa8.3□□□□□ -1.08
SMARCA4-217ENST00000591595 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
SMARCA4-217ENST00000591595 IGHV3OR16-9A0A0B4J2B5 98 aa8.29□□□□□ -1.08
SMARCA4-217ENST00000591595 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
SMARCA4-217ENST00000591595 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
SMARCA4-217ENST00000591595 A6NED7 52 aa8.29□□□□□ -1.08
SMARCA4-217ENST00000591595 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
SMARCA4-217ENST00000591595 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
SMARCA4-217ENST00000591595 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
SMARCA4-217ENST00000591595 CELA1Q9UNI1 258 aa8.28□□□□□ -1.08
SMARCA4-217ENST00000591595 NBEAL2Q6ZNJ1 2754 aa8.27□□□□□ -1.09
SMARCA4-217ENST00000591595 USP24Q9UPU5 2620 aa8.27□□□□□ -1.09
SMARCA4-217ENST00000591595 GYPEP15421 78 aa8.27□□□□□ -1.09
SMARCA4-217ENST00000591595 C6orf99Q4VX62 202 aa8.27□□□□□ -1.09
SMARCA4-217ENST00000591595 GCN1Q92616 2671 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-217ENST00000591595 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
SMARCA4-217ENST00000591595 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
SMARCA4-217ENST00000591595 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
SMARCA4-217ENST00000591595 VPREB1P12018 145 aa8.25□□□□□ -1.09
SMARCA4-217ENST00000591595 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
SMARCA4-217ENST00000591595 APCP25054 2843 aa8.25□□□□□ -1.09
SMARCA4-217ENST00000591595 LCE6AA0A183 80 aa8.24□□□□□ -1.09
SMARCA4-217ENST00000591595 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
SMARCA4-217ENST00000591595 IGLV1-51P01701 117 aa8.24□□□□□ -1.09
SMARCA4-217ENST00000591595 NOTCH2Q04721 2471 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms