RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 H3BNG1 76 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 LINC00158P58513 81 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 ATXN8Q156A1 80 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 Q8IZM0 81 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 LINC01561Q8N1V8 128 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 KLK12Q9UKR0 248 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 TRBV10-2A0A0K0K1G8 114 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 COX7CP15954 63 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 C11orf45Q8TAV5 145 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 PKIGQ9Y2B9 76 aa7.69□□□□□ -1.18
TPM4-213ENST00000591226 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
TPM4-213ENST00000591226 K7EIL1 84 aa7.68□□□□□ -1.18
TPM4-213ENST00000591226 PFN2P35080 140 aa7.68□□□□□ -1.18
TPM4-213ENST00000591226 DEFB131BA0A096LNP1 70 aa7.67□□□□□ -1.18
TPM4-213ENST00000591226 WFDC10BQ8IUB3 73 aa7.67□□□□□ -1.18
TPM4-213ENST00000591226 PRR34Q9NV39 138 aa7.67□□□□□ -1.18
TPM4-213ENST00000591226 TRACP01848 142 aa7.67□□□□□ -1.18
TPM4-213ENST00000591226 CRYGAP11844 174 aa7.67□□□□□ -1.18
TPM4-213ENST00000591226 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
TPM4-213ENST00000591226 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
TPM4-213ENST00000591226 ENHOQ6UWT2 76 aa7.66□□□□□ -1.18
TPM4-213ENST00000591226 C2orf48Q96LS8 159 aa7.66□□□□□ -1.18
TPM4-213ENST00000591226 SMCR5Q8TEV8 140 aa7.65□□□□□ -1.18
TPM4-213ENST00000591226 IMUPQ9GZP8 106 aa7.65□□□□□ -1.18
TPM4-213ENST00000591226 CCL18P55774 89 aa7.65□□□□□ -1.18
TPM4-213ENST00000591226 ESRGQ1W209 222 aa7.65□□□□□ -1.18
TPM4-213ENST00000591226 DEFB121Q5J5C9 76 aa7.65□□□□□ -1.18
TPM4-213ENST00000591226 TM2D3Q9BRN9 247 aa7.65□□□□□ -1.19
TPM4-213ENST00000591226 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.19
TPM4-213ENST00000591226 LINC00336Q6ZUF6 198 aa7.64□□□□□ -1.19
TPM4-213ENST00000591226 PRO0628Q9UI54 55 aa7.64□□□□□ -1.19
TPM4-213ENST00000591226 CRPP02741 224 aa7.64□□□□□ -1.19
TPM4-213ENST00000591226 COX6CP09669 75 aa7.64□□□□□ -1.19
TPM4-213ENST00000591226 CLEC2BQ92478 149 aa7.64□□□□□ -1.19
TPM4-213ENST00000591226 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
TPM4-213ENST00000591226 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
TPM4-213ENST00000591226 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
TPM4-213ENST00000591226 CXCL5P42830 114 aa7.63□□□□□ -1.19
TPM4-213ENST00000591226 TMEM258P61165 79 aa7.63□□□□□ -1.19
TPM4-213ENST00000591226 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
TPM4-213ENST00000591226 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
TPM4-213ENST00000591226 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
TPM4-213ENST00000591226 SPAG11BQ08648 103 aa7.62□□□□□ -1.19
TPM4-213ENST00000591226 C6orf223Q8N319 242 aa7.62□□□□□ -1.19
TPM4-213ENST00000591226 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
TPM4-213ENST00000591226 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
TPM4-213ENST00000591226 TRAV10A0A0B4J240 114 aa7.6□□□□□ -1.19
TPM4-213ENST00000591226 H3BT86 120 aa7.6□□□□□ -1.19
TPM4-213ENST00000591226 LST1O00453 97 aa7.6□□□□□ -1.19
TPM4-213ENST00000591226 C10orf25Q5T742 122 aa7.6□□□□□ -1.19
TPM4-213ENST00000591226 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
TPM4-213ENST00000591226 UNQ6190/PRO20217Q6UXQ8 127 aa7.59□□□□□ -1.19
TPM4-213ENST00000591226 COX17Q14061 63 aa7.58□□□□□ -1.2
TPM4-213ENST00000591226 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
TPM4-213ENST00000591226 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
TPM4-213ENST00000591226 ATOX1O00244 68 aa7.57□□□□□ -1.2
TPM4-213ENST00000591226 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
TPM4-213ENST00000591226 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
TPM4-213ENST00000591226 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
TPM4-213ENST00000591226 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
TPM4-213ENST00000591226 RPL28P46779 137 aaKnown RBP7.56□□□□□ -1.2
TPM4-213ENST00000591226 V9GYY9 64 aa7.56□□□□□ -1.2
TPM4-213ENST00000591226 SMIM11BQ8TCY0 68 aa7.56□□□□□ -1.2
TPM4-213ENST00000591226 ACYP1P07311 99 aa7.55□□□□□ -1.2
TPM4-213ENST00000591226 PRR3P79522 188 aaKnown RBP7.55□□□□□ -1.2
TPM4-213ENST00000591226 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
TPM4-213ENST00000591226 UPK3BQ9BT76 320 aa7.55□□□□□ -1.2
TPM4-213ENST00000591226 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
TPM4-213ENST00000591226 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
TPM4-213ENST00000591226 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
TPM4-213ENST00000591226 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
TPM4-213ENST00000591226 DNAH10OSP0CZ25 163 aa7.54□□□□□ -1.2
TPM4-213ENST00000591226 Q8NDZ9 215 aa7.54□□□□□ -1.2
TPM4-213ENST00000591226 C6orf48Q9UBA6 75 aa7.54□□□□□ -1.2
TPM4-213ENST00000591226 IGKV2D-24A0A075B6R9 120 aa7.53□□□□□ -1.2
TPM4-213ENST00000591226 C15orf56Q8N910 161 aa7.53□□□□□ -1.2
TPM4-213ENST00000591226 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
TPM4-213ENST00000591226 RPL18AQ02543 176 aaKnown RBP7.53□□□□□ -1.2
TPM4-213ENST00000591226 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
TPM4-213ENST00000591226 Q9HAA7 133 aa7.53□□□□□ -1.2
TPM4-213ENST00000591226 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
TPM4-213ENST00000591226 NDUFC2O95298 119 aa7.52□□□□□ -1.21
TPM4-213ENST00000591226 SERP2Q8N6R1 65 aa7.52□□□□□ -1.21
TPM4-213ENST00000591226 LCE2DQ5TA82 110 aaPredicted RBP7.52□□□□□ -1.21
TPM4-213ENST00000591226 NCR3O14931 201 aa7.51□□□□□ -1.21
TPM4-213ENST00000591226 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
TPM4-213ENST00000591226 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
TPM4-213ENST00000591226 A0A087WVE0 104 aa7.5□□□□□ -1.21
TPM4-213ENST00000591226 C1orf195Q5TG92 126 aa7.5□□□□□ -1.21
TPM4-213ENST00000591226 MUC7Q8TAX7 377 aa7.5□□□□□ -1.21
TPM4-213ENST00000591226 A0A087WYN8 130 aa7.49□□□□□ -1.21
TPM4-213ENST00000591226 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
TPM4-213ENST00000591226 Q6ZRU5 148 aa7.49□□□□□ -1.21
TPM4-213ENST00000591226 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
TPM4-213ENST00000591226 H0YGX0 51 aa7.48□□□□□ -1.21
TPM4-213ENST00000591226 DNAH1Q9P2D7 4330 aa7.47□□□□□ -1.21
TPM4-213ENST00000591226 B9D2Q9BPU9 175 aa7.47□□□□□ -1.21
TPM4-213ENST00000591226 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.21
TPM4-213ENST00000591226 BRK1Q8WUW1 75 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms