RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 NBASA2RRP1 2371 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 TRAV30A0A087WSZ9 112 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 H0YGG7 62 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 ARMS2P0C7Q2 107 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 HEPN1Q6WQI6 88 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 CDKN2A-AS1Q9UH64 79 aa-1.14□□□□□ -2.59
SMARCE1-219ENST00000583294 SPG11Q96JI7 2443 aa-1.15□□□□□ -2.59
SMARCE1-219ENST00000583294 LAMA1P25391 3075 aa-1.15□□□□□ -2.59
SMARCE1-219ENST00000583294 PTPN23Q9H3S7 1636 aa-1.15□□□□□ -2.59
SMARCE1-219ENST00000583294 SLIT1O75093 1534 aa-1.15□□□□□ -2.59
SMARCE1-219ENST00000583294 EIF4G3O43432 1585 aaKnown RBP-1.16□□□□□ -2.59
SMARCE1-219ENST00000583294 ADAMTS12P58397 1594 aa-1.16□□□□□ -2.59
SMARCE1-219ENST00000583294 hADV29S1A0JD25 119 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 GNG8Q9UK08 70 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 LRRC37AA6NMS7 1700 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 HECTD1Q9ULT8 2610 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 REV3LO60673 3130 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 MYO18BQ8IUG5 2567 aa-1.16□□□□□ -2.6
SMARCE1-219ENST00000583294 CUBNO60494 3623 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 CC2D2AQ9P2K1 1620 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 SPTY2D1-AS1A0A0U1RR47 76 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 PSMG4Q5JS54 123 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 HIGD1BQ9P298 99 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 CACFD1Q9UGQ2 172 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 DNAH9Q9NYC9 4486 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 CLIP1P30622 1438 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 TROQ12816 1431 aaPredicted RBP-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 NCOA3Q9Y6Q9 1424 aa-1.17□□□□□ -2.6
SMARCE1-219ENST00000583294 LAMA2P24043 3122 aaKnown RBP-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 PZPP20742 1482 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 PDCD11Q14690 1871 aaKnown RBP-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 FASNP49327 2511 aaKnown RBP-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 COL4A6Q14031 1691 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 TRBV25-1A0A075B6N4 114 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 NDUFC1O43677 76 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 PMCHL1Q16048 86 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 LELP1Q5T871 98 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 WFDC13Q8IUB5 93 aa-1.18□□□□□ -2.6
SMARCE1-219ENST00000583294 TEP1Q99973 2627 aaKnown RBP-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 RNF213Q63HN8 5207 aa-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 TRBV7-7A0A0K0K1E9 115 aa-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 ASIPP42127 132 aa-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 MRPS10P82664 201 aaKnown RBP-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 GTF2H5Q6ZYL4 71 aa-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 BIRC6Q9NR09 4857 aa-1.19□□□□□ -2.6
SMARCE1-219ENST00000583294 AKAP13Q12802 2813 aa-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 SPHKAPQ2M3C7 1700 aa-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 KIAA1551Q9HCM1 1747 aa-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 TARBP1Q13395 1621 aaKnown RBP-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 PRRC2CQ9Y520 2896 aaKnown RBP-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 KNDC1Q76NI1 1749 aa-1.2□□□□□ -2.6
SMARCE1-219ENST00000583294 C9orf92A6NGG3 77 aa-1.21□□□□□ -2.6
SMARCE1-219ENST00000583294 H3BNG1 76 aa-1.21□□□□□ -2.6
SMARCE1-219ENST00000583294 TMEM203Q969S6 136 aa-1.21□□□□□ -2.6
SMARCE1-219ENST00000583294 PKHD1L1Q86WI1 4243 aa-1.21□□□□□ -2.6
SMARCE1-219ENST00000583294 ABCC5O15440 1437 aa-1.22□□□□□ -2.6
SMARCE1-219ENST00000583294 C2orf88Q9BSF0 95 aa-1.22□□□□□ -2.6
SMARCE1-219ENST00000583294 KNL1Q8NG31 2342 aa-1.22□□□□□ -2.61
SMARCE1-219ENST00000583294 DNAH3Q8TD57 4116 aa-1.22□□□□□ -2.61
SMARCE1-219ENST00000583294 TRANK1O15050 2925 aa-1.23□□□□□ -2.61
SMARCE1-219ENST00000583294 MPC2O95563 127 aa-1.23□□□□□ -2.61
SMARCE1-219ENST00000583294 TRGV9Q99603 122 aa-1.23□□□□□ -2.61
SMARCE1-219ENST00000583294 PSENENQ9NZ42 101 aa-1.23□□□□□ -2.61
SMARCE1-219ENST00000583294 TNRC18O15417 2968 aaPredicted RBP-1.23□□□□□ -2.61
SMARCE1-219ENST00000583294 MLH3Q9UHC1 1453 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 CICQ96RK0 1608 aaPredicted RBP-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 H7BZZ5 65 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 GNGT2O14610 69 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 UQCRHP07919 91 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 AP4S1Q9Y587 144 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 SHPRHQ149N8 1683 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 TOPAZ1Q8N9V7 1692 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 CHD1O14646 1710 aa-1.24□□□□□ -2.61
SMARCE1-219ENST00000583294 LAMA3Q16787 3333 aa-1.25□□□□□ -2.61
SMARCE1-219ENST00000583294 LINC00587B1AMM8 73 aa-1.25□□□□□ -2.61
SMARCE1-219ENST00000583294 MT1HP80294 61 aa-1.25□□□□□ -2.61
SMARCE1-219ENST00000583294 CUX1P39880 1505 aa-1.25□□□□□ -2.61
SMARCE1-219ENST00000583294 SAMD9Q5K651 1589 aa-1.25□□□□□ -2.61
SMARCE1-219ENST00000583294 RYR2Q92736 4967 aa-1.26□□□□□ -2.61
SMARCE1-219ENST00000583294 AKAP9Q99996 3911 aa-1.26□□□□□ -2.61
SMARCE1-219ENST00000583294 ABCC2Q92887 1545 aa-1.26□□□□□ -2.61
SMARCE1-219ENST00000583294 ANKRD11Q6UB99 2663 aaPredicted RBP-1.26□□□□□ -2.61
SMARCE1-219ENST00000583294 ANKRD36A6QL64 1941 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 ZZEF1O43149 2961 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 HMGN3Q15651 99 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 NMSQ5H8A3 153 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 ALKAL2Q6UX46 152 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 DMXL1Q9Y485 3027 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 DNAH2Q9P225 4427 aa-1.27□□□□□ -2.61
SMARCE1-219ENST00000583294 PRDM15P57071 1507 aaPredicted RBP-1.28□□□□□ -2.61
SMARCE1-219ENST00000583294 RAPGEF2Q9Y4G8 1499 aa-1.28□□□□□ -2.61
SMARCE1-219ENST00000583294 SARNPP82979 210 aaKnown RBP-1.28□□□□□ -2.61
SMARCE1-219ENST00000583294 DEFA5Q01523 94 aa-1.28□□□□□ -2.61
SMARCE1-219ENST00000583294 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.28□□□□□ -2.61
SMARCE1-219ENST00000583294 COL14A1Q05707 1796 aaKnown RBP-1.29□□□□□ -2.62
SMARCE1-219ENST00000583294 TMEM218A2RU14 115 aa-1.29□□□□□ -2.62
SMARCE1-219ENST00000583294 IGLC2P0DOY2 106 aa-1.29□□□□□ -2.62
SMARCE1-219ENST00000583294 IGLC3P0DOY3 106 aa-1.29□□□□□ -2.62
SMARCE1-219ENST00000583294 APOBP04114 4563 aaKnown RBP-1.29□□□□□ -2.62
SMARCE1-219ENST00000583294 LYSTQ99698 3801 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 197.3 ms