RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TMEM254Q8TBM7 123 aa10.35□□□□□ -0.75
ITGB4-206ENST00000579662 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
ITGB4-206ENST00000579662 hDV103S1A0JD37 113 aa10.34□□□□□ -0.75
ITGB4-206ENST00000579662 Q6ZRX8 168 aa10.34□□□□□ -0.75
ITGB4-206ENST00000579662 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
ITGB4-206ENST00000579662 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
ITGB4-206ENST00000579662 TLN2Q9Y4G6 2542 aa10.32□□□□□ -0.76
ITGB4-206ENST00000579662 CSNK1G2-AS1Q8NCQ2 148 aa10.32□□□□□ -0.76
ITGB4-206ENST00000579662 RTL8CO15255 209 aa10.31□□□□□ -0.76
ITGB4-206ENST00000579662 FAM218AQ96MZ4 157 aa10.31□□□□□ -0.76
ITGB4-206ENST00000579662 PCOTHQ58A44 107 aa10.31□□□□□ -0.76
ITGB4-206ENST00000579662 BCE1O60756 84 aa10.31□□□□□ -0.76
ITGB4-206ENST00000579662 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
ITGB4-206ENST00000579662 USP9YO00507 2555 aaPredicted RBP10.3□□□□□ -0.76
ITGB4-206ENST00000579662 SMCPP49901 116 aaPredicted RBP10.3□□□□□ -0.76
ITGB4-206ENST00000579662 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
ITGB4-206ENST00000579662 ZFYVE26Q68DK2 2539 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 A0A0U1RQV1 116 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 MOBPQ13875 183 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
ITGB4-206ENST00000579662 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
ITGB4-206ENST00000579662 DOPEY1Q5JWR5 2465 aa10.28□□□□□ -0.76
ITGB4-206ENST00000579662 Q8NBF4 154 aa10.27□□□□□ -0.76
ITGB4-206ENST00000579662 Q6ZQT0 140 aa10.27□□□□□ -0.77
ITGB4-206ENST00000579662 CHD8Q9HCK8 2581 aa10.27□□□□□ -0.77
ITGB4-206ENST00000579662 Q6ZRP5 223 aa10.27□□□□□ -0.77
ITGB4-206ENST00000579662 LITAFQ99732 161 aa10.27□□□□□ -0.77
ITGB4-206ENST00000579662 SPTBN4Q9H254 2564 aa10.26□□□□□ -0.77
ITGB4-206ENST00000579662 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
ITGB4-206ENST00000579662 C1orf64Q8NEQ6 169 aa10.25□□□□□ -0.77
ITGB4-206ENST00000579662 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
ITGB4-206ENST00000579662 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
ITGB4-206ENST00000579662 LINC00476Q8WZB0 136 aa10.24□□□□□ -0.77
ITGB4-206ENST00000579662 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
ITGB4-206ENST00000579662 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
ITGB4-206ENST00000579662 VPREB1P12018 145 aa10.22□□□□□ -0.77
ITGB4-206ENST00000579662 CRYGAP11844 174 aa10.22□□□□□ -0.77
ITGB4-206ENST00000579662 ANKRD17O75179 2603 aaKnown RBP10.21□□□□□ -0.78
ITGB4-206ENST00000579662 SPACA4Q8TDM5 124 aa10.2□□□□□ -0.78
ITGB4-206ENST00000579662 KRTAP10-11P60412 298 aa10.2□□□□□ -0.78
ITGB4-206ENST00000579662 LINC00612Q8N6U2 182 aa10.19□□□□□ -0.78
ITGB4-206ENST00000579662 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
ITGB4-206ENST00000579662 CENPFP49454 3210 aa10.18□□□□□ -0.78
ITGB4-206ENST00000579662 H3BPC8 53 aa10.18□□□□□ -0.78
ITGB4-206ENST00000579662 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
ITGB4-206ENST00000579662 K7EIL1 84 aa10.17□□□□□ -0.78
ITGB4-206ENST00000579662 ST20-AS1Q8NBB2 130 aa10.17□□□□□ -0.78
ITGB4-206ENST00000579662 PKD1L2Q7Z442 2459 aa10.16□□□□□ -0.78
ITGB4-206ENST00000579662 IGKV2D-30A0A075B6S6 120 aa10.16□□□□□ -0.78
ITGB4-206ENST00000579662 SPINK1P00995 79 aa10.16□□□□□ -0.78
ITGB4-206ENST00000579662 IGKV2-30P06310 120 aa10.16□□□□□ -0.78
ITGB4-206ENST00000579662 GIG44P09565 113 aaPredicted RBP10.16□□□□□ -0.78
ITGB4-206ENST00000579662 KRTAP10-3P60369 221 aa10.16□□□□□ -0.78
ITGB4-206ENST00000579662 TRBV7-4A0A0J9YYF1 115 aa10.15□□□□□ -0.78
ITGB4-206ENST00000579662 MUC4Q99102 2169 aa10.15□□□□□ -0.79
ITGB4-206ENST00000579662 SETD2Q9BYW2 2564 aaPredicted RBP10.14□□□□□ -0.79
ITGB4-206ENST00000579662 IGLV1-50A0A075B6I6 118 aa10.14□□□□□ -0.79
ITGB4-206ENST00000579662 KCNQ1DNQ9H478 68 aa10.14□□□□□ -0.79
ITGB4-206ENST00000579662 TYMSOSQ8TAI1 123 aa10.14□□□□□ -0.79
ITGB4-206ENST00000579662 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
ITGB4-206ENST00000579662 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
ITGB4-206ENST00000579662 KRTAP1-3Q8IUG1 177 aa10.12□□□□□ -0.79
ITGB4-206ENST00000579662 C7orf65Q6ZTY9 151 aa10.12□□□□□ -0.79
ITGB4-206ENST00000579662 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
ITGB4-206ENST00000579662 LINC00313P59037 77 aa10.11□□□□□ -0.79
ITGB4-206ENST00000579662 FAM168BA1KXE4 195 aa10.1□□□□□ -0.79
ITGB4-206ENST00000579662 PSPHP1O15172 72 aa10.1□□□□□ -0.79
ITGB4-206ENST00000579662 MTORP42345 2549 aa10.1□□□□□ -0.79
ITGB4-206ENST00000579662 ACYP2P14621 99 aa10.09□□□□□ -0.79
ITGB4-206ENST00000579662 C15orf56Q8N910 161 aa10.09□□□□□ -0.79
ITGB4-206ENST00000579662 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
ITGB4-206ENST00000579662 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
ITGB4-206ENST00000579662 POLQO75417 2590 aa10.07□□□□□ -0.8
ITGB4-206ENST00000579662 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
ITGB4-206ENST00000579662 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
ITGB4-206ENST00000579662 TRAV22A0A0B4J277 110 aa10.07□□□□□ -0.8
ITGB4-206ENST00000579662 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
ITGB4-206ENST00000579662 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
ITGB4-206ENST00000579662 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
ITGB4-206ENST00000579662 A8MWP4 228 aa10.05□□□□□ -0.8
ITGB4-206ENST00000579662 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
ITGB4-206ENST00000579662 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
ITGB4-206ENST00000579662 A0A1B0GU69 56 aa10□□□□□ -0.81
ITGB4-206ENST00000579662 LOC101927531A0A1B0GV80 90 aa10□□□□□ -0.81
ITGB4-206ENST00000579662 C9orf129Q5T035 196 aaKnown RBP10□□□□□ -0.81
ITGB4-206ENST00000579662 A0A087WTM6 91 aa9.98□□□□□ -0.81
ITGB4-206ENST00000579662 RPS28P62857 69 aaKnown RBP9.98□□□□□ -0.81
ITGB4-206ENST00000579662 ACANP16112 2415 aa9.98□□□□□ -0.81
ITGB4-206ENST00000579662 FASNP49327 2511 aaKnown RBP9.98□□□□□ -0.81
ITGB4-206ENST00000579662 ERC2-IT1O76042 136 aa9.98□□□□□ -0.81
ITGB4-206ENST00000579662 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
ITGB4-206ENST00000579662 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
ITGB4-206ENST00000579662 ZNF861PO60384 105 aa9.96□□□□□ -0.81
ITGB4-206ENST00000579662 MRPL34Q9BQ48 92 aaKnown RBP9.96□□□□□ -0.81
ITGB4-206ENST00000579662 IGFL1Q6UW32 110 aa9.96□□□□□ -0.81
ITGB4-206ENST00000579662 Q96NJ1 140 aa9.96□□□□□ -0.81
ITGB4-206ENST00000579662 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.82
ITGB4-206ENST00000579662 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms