RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 COX6CP09669 75 aa9.38□□□□□ -0.91
SREBF1-217ENST00000577897 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
SREBF1-217ENST00000577897 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
SREBF1-217ENST00000577897 RMI2Q96E14 147 aa9.38□□□□□ -0.91
SREBF1-217ENST00000577897 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
SREBF1-217ENST00000577897 TRBV20-1A0A075B6N2 111 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 PSMB2P49721 201 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 FOXI1Q12951 378 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 SERTAD4-AS1Q5TG53 156 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
SREBF1-217ENST00000577897 F8WDY8 70 aa9.36□□□□□ -0.91
SREBF1-217ENST00000577897 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
SREBF1-217ENST00000577897 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
SREBF1-217ENST00000577897 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
SREBF1-217ENST00000577897 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
SREBF1-217ENST00000577897 TSPAN13O95857 204 aa9.35□□□□□ -0.91
SREBF1-217ENST00000577897 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
SREBF1-217ENST00000577897 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
SREBF1-217ENST00000577897 TRAV13-2A0A0B4J235 113 aa9.34□□□□□ -0.91
SREBF1-217ENST00000577897 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
SREBF1-217ENST00000577897 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
SREBF1-217ENST00000577897 NPC2P61916 151 aa9.34□□□□□ -0.91
SREBF1-217ENST00000577897 ZNF561-AS1K7EIQ3 104 aa9.33□□□□□ -0.92
SREBF1-217ENST00000577897 Q8N3U1 123 aa9.33□□□□□ -0.92
SREBF1-217ENST00000577897 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
SREBF1-217ENST00000577897 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
SREBF1-217ENST00000577897 PFN2P35080 140 aa9.32□□□□□ -0.92
SREBF1-217ENST00000577897 HAMPP81172 84 aa9.32□□□□□ -0.92
SREBF1-217ENST00000577897 DAND5Q8N907 189 aa9.32□□□□□ -0.92
SREBF1-217ENST00000577897 UPK3BQ9BT76 320 aa9.32□□□□□ -0.92
SREBF1-217ENST00000577897 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
SREBF1-217ENST00000577897 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
SREBF1-217ENST00000577897 F8W1H4 67 aa9.3□□□□□ -0.92
SREBF1-217ENST00000577897 H7C2G1 150 aa9.3□□□□□ -0.92
SREBF1-217ENST00000577897 KRTAP10-1P60331 282 aa9.3□□□□□ -0.92
SREBF1-217ENST00000577897 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
SREBF1-217ENST00000577897 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
SREBF1-217ENST00000577897 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
SREBF1-217ENST00000577897 GVQW2A0A096LPI5 108 aaPredicted RBP9.28□□□□□ -0.92
SREBF1-217ENST00000577897 ATXN8Q156A1 80 aa9.28□□□□□ -0.92
SREBF1-217ENST00000577897 C2orf48Q96LS8 159 aa9.28□□□□□ -0.92
SREBF1-217ENST00000577897 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
SREBF1-217ENST00000577897 NDUFC2O95298 119 aa9.26□□□□□ -0.93
SREBF1-217ENST00000577897 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
SREBF1-217ENST00000577897 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
SREBF1-217ENST00000577897 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
SREBF1-217ENST00000577897 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
SREBF1-217ENST00000577897 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-217ENST00000577897 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
SREBF1-217ENST00000577897 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-217ENST00000577897 H3BMG7 143 aa9.23□□□□□ -0.93
SREBF1-217ENST00000577897 Q9HAA7 133 aa9.23□□□□□ -0.93
SREBF1-217ENST00000577897 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
SREBF1-217ENST00000577897 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
SREBF1-217ENST00000577897 J3QR89 54 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 TRIAP1O43715 76 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 SNCGO76070 127 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 RNF213Q63HN8 5207 aa9.21□□□□□ -0.94
SREBF1-217ENST00000577897 K7ERU9 68 aa9.2□□□□□ -0.94
SREBF1-217ENST00000577897 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
SREBF1-217ENST00000577897 TCL1BO95988 128 aa9.2□□□□□ -0.94
SREBF1-217ENST00000577897 H0YGX0 51 aa9.19□□□□□ -0.94
SREBF1-217ENST00000577897 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
SREBF1-217ENST00000577897 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
SREBF1-217ENST00000577897 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
SREBF1-217ENST00000577897 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
SREBF1-217ENST00000577897 A0A087WTM6 91 aa9.18□□□□□ -0.94
SREBF1-217ENST00000577897 M0QXV9 152 aa9.18□□□□□ -0.94
SREBF1-217ENST00000577897 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
SREBF1-217ENST00000577897 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
SREBF1-217ENST00000577897 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
SREBF1-217ENST00000577897 C15orf56Q8N910 161 aa9.17□□□□□ -0.94
SREBF1-217ENST00000577897 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
SREBF1-217ENST00000577897 PLA2G1BP04054 148 aaKnown RBP9.16□□□□□ -0.94
SREBF1-217ENST00000577897 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
SREBF1-217ENST00000577897 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
SREBF1-217ENST00000577897 LRP1Q07954 4544 aaKnown RBP9.15□□□□□ -0.94
SREBF1-217ENST00000577897 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 LST1O00453 97 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 PSCAO43653 123 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 LINC01620Q4KN68 170 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
SREBF1-217ENST00000577897 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
SREBF1-217ENST00000577897 C9JAW5 83 aa9.14□□□□□ -0.95
SREBF1-217ENST00000577897 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
SREBF1-217ENST00000577897 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
SREBF1-217ENST00000577897 H3BT86 120 aa9.13□□□□□ -0.95
SREBF1-217ENST00000577897 SLC25A20O43772 301 aa9.13□□□□□ -0.95
SREBF1-217ENST00000577897 TRACP01848 142 aa9.13□□□□□ -0.95
SREBF1-217ENST00000577897 Q6ZRU5 148 aa9.13□□□□□ -0.95
SREBF1-217ENST00000577897 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms