RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 LOC107984640A0A0U1RRK4 108 aa7.6□□□□□ -1.19
RNF43-203ENST00000577716 Q6ZVQ6 151 aa7.6□□□□□ -1.19
RNF43-203ENST00000577716 LITAFQ99732 161 aa7.6□□□□□ -1.19
RNF43-203ENST00000577716 C1orf137Q5JT78 98 aa7.59□□□□□ -1.19
RNF43-203ENST00000577716 A0A0U1RQV1 116 aa7.59□□□□□ -1.19
RNF43-203ENST00000577716 FHL3Q13643 280 aa7.59□□□□□ -1.19
RNF43-203ENST00000577716 LYPD5Q6UWN5 251 aa7.59□□□□□ -1.2
RNF43-203ENST00000577716 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.2
RNF43-203ENST00000577716 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
RNF43-203ENST00000577716 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
RNF43-203ENST00000577716 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
RNF43-203ENST00000577716 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
RNF43-203ENST00000577716 ADGRG4Q8IZF6 3080 aa7.57□□□□□ -1.2
RNF43-203ENST00000577716 Q6ZRU5 148 aa7.57□□□□□ -1.2
RNF43-203ENST00000577716 MYO15AQ9UKN7 3530 aa7.56□□□□□ -1.2
RNF43-203ENST00000577716 LINC01547P58512 204 aaPredicted RBP7.56□□□□□ -1.2
RNF43-203ENST00000577716 CFAP46Q8IYW2 2715 aa7.56□□□□□ -1.2
RNF43-203ENST00000577716 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
RNF43-203ENST00000577716 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
RNF43-203ENST00000577716 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
RNF43-203ENST00000577716 SERP1Q9Y6X1 66 aa7.55□□□□□ -1.2
RNF43-203ENST00000577716 ATRQ13535 2644 aa7.55□□□□□ -1.2
RNF43-203ENST00000577716 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
RNF43-203ENST00000577716 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
RNF43-203ENST00000577716 C10orf25Q5T742 122 aa7.53□□□□□ -1.2
RNF43-203ENST00000577716 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
RNF43-203ENST00000577716 MAST4O15021 2626 aa7.52□□□□□ -1.2
RNF43-203ENST00000577716 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.2
RNF43-203ENST00000577716 FSHBP01225 129 aa7.52□□□□□ -1.21
RNF43-203ENST00000577716 X6R8D5 127 aa7.52□□□□□ -1.21
RNF43-203ENST00000577716 PLAC8L1A1L4L8 177 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 LRCOL1A6NCL2 159 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 M0R2N4 97 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 Q8N9L7 120 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 PRYO14603 147 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 LINC00208Q96KT6 92 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 DMXL2Q8TDJ6 3036 aa7.51□□□□□ -1.21
RNF43-203ENST00000577716 CRYGAP11844 174 aa7.5□□□□□ -1.21
RNF43-203ENST00000577716 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
RNF43-203ENST00000577716 SPATA3Q8NHX4 192 aa7.5□□□□□ -1.21
RNF43-203ENST00000577716 IGLV9-49A0A0B4J1Y8 123 aa7.5□□□□□ -1.21
RNF43-203ENST00000577716 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
RNF43-203ENST00000577716 ATMQ13315 3056 aa7.49□□□□□ -1.21
RNF43-203ENST00000577716 V9GYY9 64 aa7.49□□□□□ -1.21
RNF43-203ENST00000577716 A0A087WSZ3 146 aa7.49□□□□□ -1.21
RNF43-203ENST00000577716 CXCL6P80162 114 aa7.49□□□□□ -1.21
RNF43-203ENST00000577716 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
RNF43-203ENST00000577716 F8WDY8 70 aa7.48□□□□□ -1.21
RNF43-203ENST00000577716 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
RNF43-203ENST00000577716 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
RNF43-203ENST00000577716 TNRC18O15417 2968 aaPredicted RBP7.47□□□□□ -1.21
RNF43-203ENST00000577716 DEFB116Q30KQ4 102 aa7.46□□□□□ -1.21
RNF43-203ENST00000577716 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 ESRGQ1W209 222 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 KALRNO60229 2985 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 HELZ2Q9BYK8 2649 aaKnown RBP7.45□□□□□ -1.22
RNF43-203ENST00000577716 LINC00474Q9P2X8 69 aa7.45□□□□□ -1.22
RNF43-203ENST00000577716 Q6ZQT0 140 aa7.44□□□□□ -1.22
RNF43-203ENST00000577716 Q9BRP9 147 aa7.44□□□□□ -1.22
RNF43-203ENST00000577716 ZNF706Q9Y5V0 76 aaPredicted RBP7.44□□□□□ -1.22
RNF43-203ENST00000577716 PRLHP81277 87 aa7.44□□□□□ -1.22
RNF43-203ENST00000577716 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
RNF43-203ENST00000577716 LOC400499M0QZD8 3231 aa7.43□□□□□ -1.22
RNF43-203ENST00000577716 A6NED7 52 aa7.43□□□□□ -1.22
RNF43-203ENST00000577716 LINC01556Q5JQF7 62 aa7.43□□□□□ -1.22
RNF43-203ENST00000577716 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
RNF43-203ENST00000577716 CFAP47Q6ZTR5 3102 aa7.43□□□□□ -1.22
RNF43-203ENST00000577716 NHLRC4P0CG21 123 aaPredicted RBP7.42□□□□□ -1.22
RNF43-203ENST00000577716 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
RNF43-203ENST00000577716 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 FLNCQ14315 2725 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 TRBV7-6A0A0J9YX20 115 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 Q8NAQ8 132 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
RNF43-203ENST00000577716 CSNK1G2-AS1Q8NCQ2 148 aa7.4□□□□□ -1.22
RNF43-203ENST00000577716 BCE1O60756 84 aa7.4□□□□□ -1.22
RNF43-203ENST00000577716 SEC61GP60059 68 aa7.4□□□□□ -1.22
RNF43-203ENST00000577716 COL12A1Q99715 3063 aa7.4□□□□□ -1.23
RNF43-203ENST00000577716 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.23
RNF43-203ENST00000577716 A0A096LNT2 108 aa7.4□□□□□ -1.23
RNF43-203ENST00000577716 C1orf195Q5TG92 126 aa7.4□□□□□ -1.23
RNF43-203ENST00000577716 IGSF10Q6WRI0 2623 aa7.39□□□□□ -1.23
RNF43-203ENST00000577716 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
RNF43-203ENST00000577716 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
RNF43-203ENST00000577716 TACC2O95359 2948 aa7.39□□□□□ -1.23
RNF43-203ENST00000577716 SMIM29Q86T20 159 aa7.39□□□□□ -1.23
RNF43-203ENST00000577716 LRBAP50851 2863 aa7.38□□□□□ -1.23
RNF43-203ENST00000577716 GIG44P09565 113 aaPredicted RBP7.38□□□□□ -1.23
RNF43-203ENST00000577716 PSPHP1O15172 72 aa7.38□□□□□ -1.23
RNF43-203ENST00000577716 H0Y9P7 68 aa7.37□□□□□ -1.23
RNF43-203ENST00000577716 H3BNG1 76 aa7.37□□□□□ -1.23
RNF43-203ENST00000577716 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
RNF43-203ENST00000577716 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
RNF43-203ENST00000577716 TM2D3Q9BRN9 247 aa7.36□□□□□ -1.23
RNF43-203ENST00000577716 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms