RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 NOP16Q9Y3C1 178 aaKnown RBP0.39□□□□□ -2.35
CDC27-218ENST00000575830 IFITM5A6NNB3 132 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 C5orf58C9J3I9 102 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 NCR3O14931 201 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 TSPAN19P0C672 248 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 DEFB130BP0DP73 79 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 DEFB130AP0DP74 79 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 PIPP12273 146 aaPredicted RBP0.38□□□□□ -2.35
CDC27-218ENST00000575830 AKR1D1P51857 326 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 FXYD4P59646 89 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 DNAJB13P59910 316 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 CCDC153Q494R4 210 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 HSD17B12Q53GQ0 312 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 OCIAD2Q56VL3 154 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 LINC01556Q5JQF7 62 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 TMEM244Q5VVB8 128 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 C5orf17Q8NAS9 161 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 DPH3Q96FX2 82 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 LINC00312Q9Y6C7 94 aa0.38□□□□□ -2.35
CDC27-218ENST00000575830 A0A096LPI6 279 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 DBIP07108 87 aaKnown RBP0.37□□□□□ -2.35
CDC27-218ENST00000575830 IFI6P09912 130 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 HLA-DRB4P13762 266 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 ETV6P41212 452 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 DEFB131AP59861 70 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 SNRPD3P62318 126 aaKnown RBP0.37□□□□□ -2.35
CDC27-218ENST00000575830 DEFA5Q01523 94 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 NEDD8Q15843 81 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 KRTAP19-8Q3LI54 63 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 GLYATL3Q5SZD4 288 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 Q5VV11 94 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 UNQ5815/PRO19632Q6UWF5 114 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 HEPN1Q6WQI6 88 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 TCTE3Q8IZS6 198 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 ATP6V0E2Q8NHE4 81 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 HLA-DRB4X5D2U9 266 aa0.37□□□□□ -2.35
CDC27-218ENST00000575830 A0A1W2PPM0 123 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 C20orf202A1L168 122 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 EDF1O60869 148 aaKnown RBP0.36□□□□□ -2.35
CDC27-218ENST00000575830 NDUFA3O95167 84 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 GYPBP06028 91 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 ADCYAP1P18509 176 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 GTF2A1P52655 376 aaPredicted RBP0.36□□□□□ -2.35
CDC27-218ENST00000575830 C10orf128Q5T292 105 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 ATOH7Q8N100 152 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 MMGT1Q8N4V1 131 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 LEAP2Q969E1 77 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
CDC27-218ENST00000575830 SLC35B3Q9H1N7 401 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 BATF3Q9NR55 127 aa0.36□□□□□ -2.35
CDC27-218ENST00000575830 MRPL35Q9NZE8 188 aaKnown RBP0.36□□□□□ -2.35
CDC27-218ENST00000575830 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.35□□□□□ -2.35
CDC27-218ENST00000575830 TRAV23DV6A0A075B6W5 121 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 TRAV2A0A0B4J234 112 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 IGHV1-24A0A0C4DH33 117 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 PNMA8CA0A1B0GUJ8 204 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 FAM223BA6NKX1 122 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 CDC42EP2O14613 210 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 HIST1H1BP16401 226 aaKnown RBP0.35□□□□□ -2.35
CDC27-218ENST00000575830 EDDM3BP56851 147 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 PCBD1P61457 104 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 HIST1H1AQ02539 215 aaPredicted RBP0.35□□□□□ -2.35
CDC27-218ENST00000575830 FAM223AQ8IWN6 122 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 BANF2Q9H503 90 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 GSKIPQ9P0R6 139 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 COMMD3Q9UBI1 195 aa0.35□□□□□ -2.35
CDC27-218ENST00000575830 LSM2Q9Y333 95 aaKnown RBP0.35□□□□□ -2.35
CDC27-218ENST00000575830 A0A0D9SG42 100 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 LOC107984156A0A0G2JMH3 177 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 TMEM14DPA8MWL7 114 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 M0R2P5 195 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 IGKCP01834 107 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 IGLC6P0CF74 106 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 APELAP0DMC3 54 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 CKS2P33552 79 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 ZNF137PP52743 207 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 CKS1BP61024 79 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 LSM3P62310 102 aaKnown RBP0.34□□□□□ -2.36
CDC27-218ENST00000575830 FXYD3Q14802 87 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 RHOHQ15669 191 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 XAF1Q6GPH4 301 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 Q6ZQY7 126 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 ARL17AQ8IVW1 177 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 ANP32BQ92688 251 aaKnown RBP0.34□□□□□ -2.36
CDC27-218ENST00000575830 SDF2Q99470 211 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 SMIM7Q9BQ49 75 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 C10orf95Q9H7T3 257 aa0.34□□□□□ -2.36
CDC27-218ENST00000575830 MRPL36Q9P0J6 103 aaKnown RBP0.34□□□□□ -2.36
CDC27-218ENST00000575830 TRBV20-1A0A075B6N2 111 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 TRBV30A0A0K0K1B3 111 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 FAM236AA0A1B0GUQ0 79 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 FAM236BA0A1B0GV22 79 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 TMEM30CPA0ZSE6 113 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 SULT1C4O75897 302 aa0.33□□□□□ -2.36
CDC27-218ENST00000575830 NCR2O95944 276 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms