RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 RBM3P98179 157 aaKnown RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 RPL18AQ02543 176 aaKnown RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 RBMY1FQ15415 496 aaKnown RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 RNASE13Q5GAN3 156 aaKnown RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 SDIM1Q6ZPB5 146 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 C11orf72Q8NBR9 251 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 RMI2Q96E14 147 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 ZNF625Q96I27 306 aaPredicted RBP1.81□□□□□ -2.12
ERCC4-204ENST00000573018 ARHGAP32A7KAX9 2087 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 AKAP13Q12802 2813 aa1.81□□□□□ -2.12
ERCC4-204ENST00000573018 USP34Q70CQ2 3546 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 WDFY3Q8IZQ1 3526 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 SPG11Q96JI7 2443 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 EYSQ5T1H1 3165 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 PKD1L2Q7Z442 2459 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 LECT2O14960 151 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 IGLV1-51P01701 117 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 ANGP03950 147 aaKnown RBP1.8□□□□□ -2.12
ERCC4-204ENST00000573018 CCKP06307 115 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 SPART-AS1P0CW21 52 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 CRYGAP11844 174 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB1P60022 68 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB136Q30KP8 78 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 CEMP1Q6PRD7 247 aaPredicted RBP1.8□□□□□ -2.12
ERCC4-204ENST00000573018 Q6ZQT7 251 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 Q6ZTI0 123 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 CHCHD10Q8WYQ3 142 aaPredicted RBP1.8□□□□□ -2.12
ERCC4-204ENST00000573018 DIRC1Q969H9 104 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 SS18L2Q9UHA2 77 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 KLK5Q9Y337 293 aaPredicted RBP1.8□□□□□ -2.12
ERCC4-204ENST00000573018 MUC4Q99102 2169 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 FREM2Q5SZK8 3169 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 TLN2Q9Y4G6 2542 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 BOD1L1Q8NFC6 3051 aa1.8□□□□□ -2.12
ERCC4-204ENST00000573018 MED13LQ71F56 2210 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 DOPEY2Q9Y3R5 2298 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 CSPG4Q6UVK1 2322 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 USP9YO00507 2555 aaPredicted RBP1.79□□□□□ -2.12
ERCC4-204ENST00000573018 TACC2O95359 2948 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 MGAQ8IWI9 3026 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 LOC110117498A0A087WWA1 95 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 IGHV3OR16-9A0A0B4J2B5 98 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 LOC107984640A0A0U1RRK4 108 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 LINC00959A0A1B0GUT2 108 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 F5H768 121 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB130BP0DP73 79 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB130AP0DP74 79 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 FUSP35637 526 aaKnown RBP eCLIP1.79□□□□□ -2.12
ERCC4-204ENST00000573018 XCL1P47992 114 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 C5orf47Q569G3 176 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 LELP1Q5T871 98 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.79□□□□□ -2.12
ERCC4-204ENST00000573018 Q8N814 137 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 SMIM11BQ8TCY0 68 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 DEFB104AQ8WTQ1 72 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 C14orf132Q9NPU4 83 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 WNK1Q9H4A3 2382 aa1.79□□□□□ -2.12
ERCC4-204ENST00000573018 ADGRG4Q8IZF6 3080 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 USP9XQ93008 2570 aaPredicted RBP1.78□□□□□ -2.12
ERCC4-204ENST00000573018 TRAV7A0A075B6U4 112 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 TRAV23DV6A0A075B6W5 121 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 GVQW2A0A096LPI5 108 aaPredicted RBP1.78□□□□□ -2.12
ERCC4-204ENST00000573018 F8WEM9 126 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 H3BNG1 76 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 CCDC179H3BU77 68 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 COX7BP24311 80 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 CCL18P55774 89 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 REG3AQ06141 175 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 SPAG11BQ08648 103 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 C5orf38Q86SI9 138 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 C1orf158Q8N1D5 194 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 UPK3BQ9BT76 320 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 WDFY4Q6ZS81 3184 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 KALRNO60229 2985 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 ABCA2Q9BZC7 2435 aa1.78□□□□□ -2.12
ERCC4-204ENST00000573018 LRBAP50851 2863 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 A0A096LNT2 108 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 FAM236DA0A1B0GTK5 79 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 M0R378 163 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 NDUFB1O75438 58 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 FAM236CP0DP71 79 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 HAMPP81172 84 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 COX6A2Q02221 97 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 C10orf99Q6UWK7 81 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 NTM-AS1Q6ZSK4 140 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00269Q8N2A0 174 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00337Q8N6G1 96 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 NRGNQ92686 78 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 OBSCN-AS1Q96MR7 158 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 CAMK2N2Q96S95 79 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 HRNRQ86YZ3 2850 aaPredicted RBP1.77□□□□□ -2.13
ERCC4-204ENST00000573018 DMDP11532 3685 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 CENPEQ02224 2701 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 SPEGQ15772 3267 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 PTPN13Q12923 2485 aa1.77□□□□□ -2.13
ERCC4-204ENST00000573018 ZZEF1O43149 2961 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms